DY262448
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_SHEPA (Ribonuclease 3 OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=rnc PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.615e-11 Identity = 49/182 (26.92%), Postives = 85/182 (46.70%), Query Frame = 3 Query: 153 INYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQVDI 698 + Y F K L++ALTH S ++ + +RLEF+GD+ L + +S+ ++ +P G LS +RA + + LA +A++ +++ L G + +LAD VE+I AIY +D D++ + E + + E Q P TLL + QK K + + Sbjct: 14 LGYEFNEKAFLDQALTHRSASNKHN-ERLEFLGDSILSIVISDALYHQFPAATEGDLSRMRATLVCGKMLAEIAIEFKLGDYLKLGPGELK-------------------SGGFRRESILADAVEAIIGAIY--LDSDIENCRQLVLNWYESRLKVIEPINQKDPKTLLQEYLQKYRKPLPV 173
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_MYCS5 (Ribonuclease 3 OS=Mycoplasma synoviae (strain 53) GN=rnc PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.615e-11 Identity = 69/254 (27.17%), Postives = 117/254 (46.06%), Query Frame = 3 Query: 114 PEMEDAVFYVENIINYNFKNKRLLEEALTHSSYT----DSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVD------IDFDLQKLWMIF-----RGLLEPIVTLEELQQQPQPVTLLFKLCQ-KNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKL 827 P +E+ +++ N +KN L EA TH +Y+ +S Y+RLEF+GD+ +G +S+Y + L+PG+LS LR+ + L ++A K KV++ + ++ V S VL+D+VE++ AAIY+D DF + I + +P L+E Q T+ ++ + N + + K W N+ +Y G ++ K+ A+ NAA AL KL Sbjct: 7 PSIEELKAFLQKN-NIEYKNIDLFIEATTHKTYSKVNKNSKDYERLEFLGDSLVGFLISDYCVREFSSLEPGELSRLRSKLVDKLALFKIAQKL---------------KVEQIIKTGPKKARNEVLSSS----NVLSDVVEALIAAIYLDQGMQSAKDFIKSHFYEIANKAQNKPNKDPKSELQEYFQTISAETVKYETIEIPNKRSFESKAWHLNK-----IYGTGVGLS------KKDAEKNAAANALSKL 229
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_AGRT5 (Ribonuclease 3 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=rnc PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 2.615e-11 Identity = 47/153 (30.72%), Postives = 74/153 (48.37%), Query Frame = 3 Query: 102 SLPSPEMEDAVFYVENIINYNFKNKRLLEEALTHSSYTDSTS--YQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVD 554 S P D + +E +I Y FK K L+ ALTH+S + + Y+RLEF+GD LGL ++ +F + G+LS+ +S E A + + G + F+R + D K +A+ V AD+VES+ A +Y+D Sbjct: 2 SKTKPLSADEISRLEALIGYEFKEKARLDRALTHASARSAAAGNYERLEFLGDRVLGLCVAELLFSTFRNASEGELSVRLNQLVSAESCAAIGDEMGLHNFIRTGS----DVKKLTGKAML---------------NVRADVVESLIATLYLD 135
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_THEP1 (Ribonuclease 3 OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=rnc PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.415e-11 Identity = 71/243 (29.22%), Postives = 102/243 (41.98%), Query Frame = 3 Query: 162 NFKNKRLLEEALTHSSYT---------DSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQK----------LWMIFRG--LLEPIVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKL 827 NFKN+ LL AL HSSY D S ++LEF+GDA L L + ++ YP+ + G L+ ++A S E LA V+ + KF+ E+ T G +LAD E++ AAIY+D + K + I RG L + L+E+ Q V + L + D R + V VDG +A K+ A+ AAR A KL Sbjct: 19 NFKNEELLFRALCHSSYANEQNQAGRKDVESNEKLEFLGDAVLELFVCEILYKKYPEAEVGDLARAKSAAASEEVLAMVSRELNLGKFLFLGKG---------------EEKT----GGRDRDSILADAFEALLAAIYLDQGYHKIKELFEEEFELYIEKIMRGEMLFDYKTALQEIVQSEHKVPPEYVLVRTEKNDGD-------RIFVVEVRVDGKSIAMGRGRTKKEAEKEAARIAYEKL 235
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_PSEHT (Ribonuclease 3 OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=rnc PE=3 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 3.415e-11 Identity = 67/249 (26.91%), Postives = 112/249 (44.98%), Query Frame = 3 Query: 120 MEDAVFYVENIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLL------FKLCQKNGKQVDIKHWRKNRKNIASVYVDG--SFVASASSEQKEIAKLNAAREALXKLAQSMP 842 M+ V + I+Y F ++ LLE+A+TH S+ + +RLEF+GD+ L ++N ++ +P+ G LS +R+ + + LA ++ G ++R L G + LAD VE+I A+++D D + + +I E + + Q P TLL KL VD K N+ VDG S ++ SS +K A+ AA +AL K+ ++ P Sbjct: 1 MKKNVTELYKTIDYIFADQGLLEQAMTHRSHKGQHN-ERLEFLGDSILSFVIANALYAKFPKAREGDLSRMRSTLVRGQTLAEFGLEFGLGDYLRLGPGELK-------------------SGGFRRESTLADAVEAIIGAVFLDSDIE-RCGELILSWYEERLNAISPGLNQKDPKTLLQEHLQARKLSLPGYTVVDTKGQAHNQTFTVECIVDGMDSIISVGSSRRK--AEQKAAEKAL-KILKNEP 225
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_PSEAE (Ribonuclease 3 OS=Pseudomonas aeruginosa GN=rnc PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.415e-11 Identity = 57/188 (30.32%), Postives = 87/188 (46.28%), Query Frame = 3 Query: 120 MEDAVFYVENIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNG 683 M +++ +E + Y FK++ L+ ALTH SY + +RLEF+GDA L + +F +PQ GQLS LRA + E LA +A GF +V ++ S E + G + +LAD +E++ AIY+D D + I L + L + P T L + Q G Sbjct: 1 MSNSLDRLERKLGYTFKDRDLMVLALTHRSYAGRNN-ERLEFLGDAILNFVIGEALFHHFPQAREGQLSRLRARLVKGETLALLA--RGF-------------EVGDYLRLGSGE----LKSGGFRRESILADAMEALIGAIYLDTGMDSAR-ERIIAWLGPQLRELTPVDTNKDPKTRLQEFLQSRG 167
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_PSEAB (Ribonuclease 3 OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=rnc PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.415e-11 Identity = 57/188 (30.32%), Postives = 87/188 (46.28%), Query Frame = 3 Query: 120 MEDAVFYVENIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNG 683 M +++ +E + Y FK++ L+ ALTH SY + +RLEF+GDA L + +F +PQ GQLS LRA + E LA +A GF +V ++ S E + G + +LAD +E++ AIY+D D + I L + L + P T L + Q G Sbjct: 1 MSNSLDRLERKLGYTFKDRDLMVLALTHRSYAGRNN-ERLEFLGDAILNFVIGEALFHHFPQAREGQLSRLRARLVKGETLALLA--RGF-------------EVGDYLRLGSGE----LKSGGFRRESILADAMEALIGAIYLDTGMDSAR-ERIIAWLGPQLRELTPVDTNKDPKTRLQEFLQSRG 167
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_PSEA8 (Ribonuclease 3 OS=Pseudomonas aeruginosa (strain LESB58) GN=rnc PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.415e-11 Identity = 57/188 (30.32%), Postives = 87/188 (46.28%), Query Frame = 3 Query: 120 MEDAVFYVENIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNG 683 M +++ +E + Y FK++ L+ ALTH SY + +RLEF+GDA L + +F +PQ GQLS LRA + E LA +A GF +V ++ S E + G + +LAD +E++ AIY+D D + I L + L + P T L + Q G Sbjct: 1 MSNSLDRLERKLGYTFKDRDLMVLALTHRSYAGRNN-ERLEFLGDAILNFVIGEALFHHFPQAREGQLSRLRARLVKGETLALLA--RGF-------------EVGDYLRLGSGE----LKSGGFRRESILADAMEALIGAIYLDTGMDSAR-ERIIAWLGPQLRELTPVDTNKDPKTRLQEFLQSRG 167
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_HAEPS (Ribonuclease 3 OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=rnc PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.415e-11 Identity = 64/234 (27.35%), Postives = 114/234 (48.72%), Query Frame = 3 Query: 153 INYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVD--IDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLLF----KLCQKNGKQVDIK---HWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKL 827 + Y F N L +ALTH S S + +RLEF+GD+ L A+ ++ +P+ + G+LS +RAA + + LA VA + ++++ A L G + +L+D VE+I AA+Y+D ID ++++ ++ LL + L E Q+ P+ + KL + +DIK H + + + VD F+ + +S +K A+ +AA + + L Sbjct: 10 LGYQFANLDYLTQALTHRSAA-SKNNERLEFLGDSILNFAIGKALYEKFPKANEGELSRMRAALVKEQTLAVVARQFELGEYMKLGAGELK-------------------SGGYRRESILSDCVEAIIAAVYLDAGIDRAMERVHCWYQQLLND-MQLGEAQKDPKTRLQEYLQGRKLPLPTYEVIDIKGEAHNQTFKVSCKVEKVDEIFIGNGTSRRK--AEQDAALQVIKVL 220
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_HAEDU (Ribonuclease 3 OS=Haemophilus ducreyi GN=rnc PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.415e-11 Identity = 67/244 (27.46%), Postives = 113/244 (46.31%), Query Frame = 3 Query: 138 YVENI---INYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFD--LQKLWMIFRGLLEPIVTLEELQQQPQPVTLLFKLCQ------KNGKQVDIKHWRKNRKNIASVYVD---GSFVASASSEQKEIAKLNAAREALXKL 827 Y+E + I Y F N L +ALTH S + +RLEF+GD+ L A+ +F +PQ + G+LS +RA + + LA +A + ++++ A L G + +L+D VE+I AAIY+D D ++++ ++ LL+ ++ Q P T L + Q + +DIK N+ S ++ F+ +S +K A+ NAA + L KL Sbjct: 2 YIERLQKKIGYQFANLDYLLQALTHRSAAAKNN-ERLEFLGDSILNYAIGQALFERFPQANEGELSRMRATLVREQTLAILARQFDLGEYMKLGAGELK-------------------SGGYRRESILSDCVEAIIAAIYLDAGMDKASERIYAWYQTLLD---EMKPGDAQKDPKTRLQEFLQGRRLKLPEYEVLDIKGEAHNQIFKVSCKIETFTDIFIGIGTSRRK--AEQNAAEQILLKL 220 The following BLAST results are available for this feature:
BLAST of DY262448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 214
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262448 ID=DY262448; Name=DY262448; organism=Citrus clementina; type=EST; length=1334bpback to top |