DY262448
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_SINMW (Ribonuclease 3 OS=Sinorhizobium medicae (strain WSM419) GN=rnc PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 4.460e-11 Identity = 47/140 (33.57%), Postives = 71/140 (50.71%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSSYTD--STSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVD 554 +E I Y F K L+ ALTHSS + +YQRLEF+GD LGL ++ +F + + G+LS+ +S E A+VA + ++F+R + D + G + V AD+VES+ AAIY+D Sbjct: 14 LEAAIGYQFAEKERLDRALTHSSARSGRAINYQRLEFLGDRILGLCVAELLFQTFSDANEGELSVRLNQLVSAESCAKVADELSLHEFIR-----------------TGSDVKKITGKHMM--NVRADVVESLIAAIYLD 134
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_MESFL (Ribonuclease 3 OS=Mesoplasma florum GN=rnc PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 4.460e-11 Identity = 63/247 (25.51%), Postives = 111/247 (44.94%), Query Frame = 3 Query: 156 NYNFK--NKRLLEEALTHSSYTDST----SYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWM---IFRGLLEPIV---------TLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRK--NIASVYVDGSFVASASSEQKEIAKLNAAREALXKLAQS 836 N+ K + ++ ALTH+SY + T +YQRLEF+GDA L + +S +++L + G+L+ R+ + E L+ +A K +R + K + P +L+D+ E++ AAIY+D ++ W+ IF+ + + L+E+ Q L +++ + KH K+ K SV +DG + K+ A NAA++ L KL +S Sbjct: 9 NFGIKINDSKIFSTALTHNSYANETKTKETYQRLEFLGDAVLQMYVSKFLYLNFTNAPEGKLTKTRSDIVRQETLSEIAKMIDLGKIIRLGQGEIKSK-------------------GYEKPSILSDVYEAVTAAIYLDQTEEVLISWIKSTIFKYIEKNDYKELNHDYKSELQEIIQAEIRSDLEYRVESQ-------KHIEKDNKIEYTVSVNLDGKKYGIGTGFSKQEASQNAAKDCLNKLKKS 229
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_LEGPL (Ribonuclease 3 OS=Legionella pneumophila (strain Lens) GN=rnc PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 4.460e-11 Identity = 44/134 (32.84%), Postives = 67/134 (50.00%), Query Frame = 3 Query: 153 INYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVD 554 +NY+F N L++ALTH S S +Y+R EF+GD+ L ++N +F +P GQLS LR+ + E LA +A + G ++ L G + +LAD +E+I AAIY+D Sbjct: 12 LNYHFNNMAYLKQALTHCS-AGSDNYERFEFLGDSILSFVIANELFNRFPLHSEGQLSRLRSFLVKGEMLAEIAREIGLGDYLFLGQGEL-------------------RSGGFRRTSILADALEAILAAIYLD 125
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_FRATO (Ribonuclease 3 OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=rnc PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 4.460e-11 Identity = 47/139 (33.81%), Postives = 72/139 (51.80%), Query Frame = 3 Query: 147 NIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDF 563 NI+ YNFK+ LL ALTH S T +Y+RLEF+GD+ L ++ ++ + L G+LS LR+ + LA++A S+ +D+ + A Q G K K+L D+ E++ AIY+D DF Sbjct: 10 NILGYNFKDYTLLIRALTHRSKTKK-NYERLEFLGDSVLSFVIAEVLYKQFTDLAEGKLSQLRSKLVKGTTLAQLA-----------SSLKMDEYI--ILGASEQ--------GGHKREKILEDVFEAVIGAIYLDSDF 126
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_FRATN (Ribonuclease 3 OS=Francisella tularensis subsp. novicida (strain U112) GN=rnc PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 4.460e-11 Identity = 47/139 (33.81%), Postives = 72/139 (51.80%), Query Frame = 3 Query: 147 NIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDF 563 NI+ YNFK+ LL ALTH S T +Y+RLEF+GD+ L ++ ++ + L G+LS LR+ + LA++A S+ +D+ + A Q G K K+L D+ E++ AIY+D DF Sbjct: 10 NILGYNFKDYTLLIRALTHRSKTKK-NYERLEFLGDSVLSFVIAEVLYKQFTDLAEGKLSQLRSKLVKGTTLAQLA-----------SSLKMDEYI--ILGASEQ--------GGHKREKILEDVFEAVIGAIYLDSDF 126
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_FRATM (Ribonuclease 3 OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=rnc PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 4.460e-11 Identity = 47/139 (33.81%), Postives = 72/139 (51.80%), Query Frame = 3 Query: 147 NIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDF 563 NI+ YNFK+ LL ALTH S T +Y+RLEF+GD+ L ++ ++ + L G+LS LR+ + LA++A S+ +D+ + A Q G K K+L D+ E++ AIY+D DF Sbjct: 10 NILGYNFKDYTLLIRALTHRSKTKK-NYERLEFLGDSVLSFVIAEVLYKQFTDLAEGKLSQLRSKLVKGTTLAQLA-----------SSLKMDEYI--ILGASEQ--------GGHKREKILEDVFEAVIGAIYLDSDF 126
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_FRATH (Ribonuclease 3 OS=Francisella tularensis subsp. holarctica (strain LVS) GN=rnc PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 4.460e-11 Identity = 47/139 (33.81%), Postives = 72/139 (51.80%), Query Frame = 3 Query: 147 NIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDF 563 NI+ YNFK+ LL ALTH S T +Y+RLEF+GD+ L ++ ++ + L G+LS LR+ + LA++A S+ +D+ + A Q G K K+L D+ E++ AIY+D DF Sbjct: 10 NILGYNFKDYTLLIRALTHRSKTKK-NYERLEFLGDSVLSFVIAEVLYKQFTDLAEGKLSQLRSKLVKGTTLAQLA-----------SSLKMDEYI--ILGASEQ--------GGHKREKILEDVFEAVIGAIYLDSDF 126
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_FRATF (Ribonuclease 3 OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=rnc PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 4.460e-11 Identity = 47/139 (33.81%), Postives = 72/139 (51.80%), Query Frame = 3 Query: 147 NIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDF 563 NI+ YNFK+ LL ALTH S T +Y+RLEF+GD+ L ++ ++ + L G+LS LR+ + LA++A S+ +D+ + A Q G K K+L D+ E++ AIY+D DF Sbjct: 10 NILGYNFKDYTLLIRALTHRSKTKK-NYERLEFLGDSVLSFVIAEVLYKQFTDLAEGKLSQLRSKLVKGTTLAQLA-----------SSLKMDEYI--ILGASEQ--------GGNKREKILEDVFEAVIGAIYLDSDF 126
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_BORPE (Ribonuclease 3 OS=Bordetella pertussis GN=rnc PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 4.460e-11 Identity = 43/142 (30.28%), Postives = 72/142 (50.70%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFD 566 +E +++ F +K LLE+ALTH S+ + +RLEF+GD+ L ++ +F Y +LD G LS LRA + LA +A + +++R L G + P +LAD VE++ A+++D F+ Sbjct: 9 LETRLDHRFGDKALLEQALTHRSH-GARHNERLEFLGDSVLNFVVAAMLFERYGKLDEGDLSRLRANLVKQASLADIAQRLDLSQYLRLGEGELK-------------------SGGFRRPSILADTVEALFGAVFLDAGFE 130
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_BORPA (Ribonuclease 3 OS=Bordetella parapertussis GN=rnc PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 4.460e-11 Identity = 43/142 (30.28%), Postives = 72/142 (50.70%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFD 566 +E +++ F +K LLE+ALTH S+ + +RLEF+GD+ L ++ +F Y +LD G LS LRA + LA +A + +++R L G + P +LAD VE++ A+++D F+ Sbjct: 9 LETRLDHRFGDKALLEQALTHRSH-GARHNERLEFLGDSVLNFVVAAMLFERYGKLDEGDLSRLRANLVKQASLADIAQRLDLSQYLRLGEGELK-------------------SGGFRRPSILADTVEALFGAVFLDAGFE 130 The following BLAST results are available for this feature:
BLAST of DY262448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 214
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262448 ID=DY262448; Name=DY262448; organism=Citrus clementina; type=EST; length=1334bpback to top |