DY262448
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_BORBR (Ribonuclease 3 OS=Bordetella bronchiseptica GN=rnc PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 4.460e-11 Identity = 43/142 (30.28%), Postives = 72/142 (50.70%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFD 566 +E +++ F +K LLE+ALTH S+ + +RLEF+GD+ L ++ +F Y +LD G LS LRA + LA +A + +++R L G + P +LAD VE++ A+++D F+ Sbjct: 9 LETRLDHRFGDKALLEQALTHRSH-GARHNERLEFLGDSVLNFVVAAMLFERYGKLDEGDLSRLRANLVKQASLADIAQRLDLSQYLRLGEGELK-------------------SGGFRRPSILADTVEALFGAVFLDAGFE 130
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_NEIMB (Ribonuclease 3 OS=Neisseria meningitidis serogroup B GN=rnc PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 5.826e-11 Identity = 63/243 (25.93%), Postives = 110/243 (45.27%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQP-VTLLFKLCQ-------KNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKLAQSMPV 845 ++ + Y F++ LL +ALTH S+ + +R EF+GD+ L ++ +F A+P+L G+LS LRA+ ++ LA +A + + A L G + P +LAD +E++ AA+ D DF+ + + R L V + Q Q + T L + Q K + I + + I+ + FV A ++ A+ AA+EAL L + +P+ Sbjct: 14 IQKKLGYAFRDISLLRQALTHRSH-HAKHNERFEFVGDSILNYTVARMLFDAFPKLTEGELSRLRASLVNEGVLAEMAAEMNVGDGLYLGAGELK-------------------SGGFRRPSILADAMEAMFAAVSFDADFNTAE--KVVRHLFADRVRRADFQNQAKDGKTALQEALQARRFALPKYRIEEQIGYANDSMFVISCDLGELGFVCRAKGTSRKAAEQEAAKEALKWLEEKLPL 234
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_FRATW (Ribonuclease 3 OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=rnc PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 5.826e-11 Identity = 47/139 (33.81%), Postives = 72/139 (51.80%), Query Frame = 3 Query: 147 NIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDF 563 NI+ YNFK+ LL ALTH S T +Y+RLEF+GD+ L ++ ++ + L G+LS LR+ + LA++A S+ +D+ + A Q G K K+L D+ E++ AIY+D DF Sbjct: 10 NILGYNFKDCTLLIRALTHRSKTKK-NYERLEFLGDSVLSFVIAEVLYKQFTDLAEGKLSQLRSKLVKGTTLAQLA-----------SSLKMDEYI--ILGASEQ--------GGHKREKILEDVFEAVIGAIYLDSDF 126
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_BUCAP (Ribonuclease 3 OS=Buchnera aphidicola subsp. Schizaphis graminum GN=rnc PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 5.826e-11 Identity = 55/238 (23.11%), Postives = 111/238 (46.64%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQVD----IKHWRKNRKNIASVY-----VDGSFVASASSEQKEIAKLNAAREALXKL 827 ++ I+ Y F ++ LL++ALTH S S +RLEF+GD+ L ++N ++ +P +D G +S +RA + LA +A + ++++ L G + +LA+ VE++ +IY+D + + +I + + + + Q P T L + Q + ++ + + + +++ + SF+ +S +K A+ +AAR+AL KL Sbjct: 9 IQQILGYTFTHQELLKQALTHRS-ASSKHNERLEFLGDSILSFVIANALYQHFPYIDEGDMSRMRATLVRGNTLAEIAYEFDLGEYLQLGQGELK-------------------SGGFRRESILANTVEALIGSIYLDSNIKTVE-ELILKWYEKRLEKISPGDTQKDPKTRLQEYLQSKHLSLPSYFIVEVYGEAHNQLFTIHCEVSTLSTSFIGKGTSRRK--AEQDAARKALIKL 223
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_ACTPJ (Ribonuclease 3 OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=rnc PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 5.826e-11 Identity = 61/237 (25.74%), Postives = 109/237 (45.99%), Query Frame = 3 Query: 153 INYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFD--LQKLWMIFRGLL----------EPIVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKL 827 + Y F N L +ALTH S + + +RLEF+GD+ L A+ +F +P+ + G+LS +RA + + LA +A K G ++++ A L G + +L+D VE+I AAIY+D D + ++ + ++ LL +P L+E Q + +++ G+ H + + ++ F+ +S +K A+ NAA + L KL Sbjct: 10 LGYQFTNLDYLLQALTHRS-AGAKNNERLEFLGDSILNFAIGKALFEKFPKANEGELSRMRATLVREQTLAILARKFGLGEYMKLGAGELK-------------------SGGYRRESILSDCVEAIIAAIYLDAGMDKAIAQVHLWYQDLLAEMKPGDAQKDPKTRLQEFLQGRKLPLPTYEVLNIKGE----AHNQTFKVTCKIEMLEEIFIGIGTSRRK--AEQNAAEQVLAKL 220
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_RICTY (Ribonuclease 3 OS=Rickettsia typhi GN=rnc PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 7.608e-11 Identity = 53/197 (26.90%), Postives = 89/197 (45.18%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSS------YTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFD-----LQKLWMIFRGL-----LEPIVTLEELQQQPQPVTLLFKLCQKNG 683 +E ++ Y+FKNK LL EAL+H S Y Y+RLEF+GDA L L ++ +F + G L+ +R+ + E + V K A D + E V+ G P + ++ E++ AAIY+D + + ++KLW F + +P L+E Q +++L ++ G Sbjct: 7 LETLLGYSFKNKELLIEALSHPSLRQYHEYKYDKDYERLEFLGDAVLNLLITEILFKNFENYKEGNLAKIRSYLVCKETICIVGTK----------LALKDYIIMTHGEEVA---------GGRDNPNNIENVTEALIAAIYLDSNIEITHNIIEKLWAEFMKVQNLTDYDPKTALQEWAQASSNHLPIYRLIKREG 184
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_RICFE (Ribonuclease 3 OS=Rickettsia felis GN=rnc PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 7.608e-11 Identity = 52/197 (26.40%), Postives = 89/197 (45.18%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSS------YTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFD-----LQKLWMIFRGL-----LEPIVTLEELQQQPQPVTLLFKLCQKNG 683 +E ++ Y+FKNK LL EAL+H S Y D Y+RLEF+GDA L L ++ +F + + G L+ +R+ + E + V K ++ + E V+ G P + + E++ AAIY+D + + + KLW F + +P L+E Q +++L ++ G Sbjct: 7 LEKLLGYSFKNKELLIEALSHPSLRQHHEYKDDKDYERLEFLGDAVLNLVVTEILFKNFANYNEGNLAKIRSYLVCKETICVVGTKLTLKDYI----------IMTHGEEVA---------GGRDNPNNIENATEALIAAIYLDSNIETTRNIIGKLWAEFIKIQNLTDYDPKTALQEWAQASSHHLPIYRLIKREG 184
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_RICCK (Ribonuclease 3 OS=Rickettsia canadensis (strain McKiel) GN=rnc PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 7.608e-11 Identity = 53/197 (26.90%), Postives = 90/197 (45.69%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSS------YTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFD-----LQKLWMIFRGL-----LEPIVTLEELQQQPQPVTLLFKLCQKNG 683 +E ++ Y+FKNK LL EAL+H S Y D+ Y+RLEF+GDA L L ++ +F + + G L+ +R+ + E + V K A D + + E V+ G P + + E++ AAIY+D + + + +LW F + +P L+E Q ++ L ++ G Sbjct: 7 LEKLLGYSFKNKELLIEALSHPSLRQHHEYKDNKDYERLEFLGDAVLNLVITKILFSNFASYNEGNLAKIRSYLVCKETICMVGAK----------LALKDYIIMTYGEEVA---------GGRDNPNNIENATEALIAAIYLDSNIETTHNIIGQLWAEFIKVQNLTDYDPKTALQEWAQASDHHLPIYCLIKREG 184
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_PSEPW (Ribonuclease 3 OS=Pseudomonas putida (strain W619) GN=rnc PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 7.608e-11 Identity = 46/147 (31.29%), Postives = 70/147 (47.62%), Query Frame = 3 Query: 120 MEDAVFYVENIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDID 560 M ++ +E + Y FK++ + ALTH SY + +RLEF+GDA L +F +PQ GQLS LRA + E LAR+A +++R + L G + +LAD +E++ AIY+D D Sbjct: 1 MSASLARLERKLGYTFKDQDQMVLALTHRSYAGRNN-ERLEFLGDAILNFVAGEALFERFPQAREGQLSRLRARLVKGETLARLARGFDLGEYLRLGSGELK-------------------SGGFRRESILADALEALIGAIYLDAD 127
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_PSEE4 (Ribonuclease 3 OS=Pseudomonas entomophila (strain L48) GN=rnc PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 7.608e-11 Identity = 46/140 (32.86%), Postives = 66/140 (47.14%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDID 560 +E + Y FKN+ + ALTH SY + +RLEF+GDA L + +F +PQ GQLS LRA + E LAR+A ++R + L G + +LAD +E++ AIY D D Sbjct: 8 LERKLGYTFKNQDQMLLALTHRSYAGRNN-ERLEFLGDAILNFVVGEALFERFPQAREGQLSRLRARLVKGETLARLARGFDLGDYLRLGSGELK-------------------SGGFRRESILADALEALIGAIYQDAD 127 The following BLAST results are available for this feature:
BLAST of DY262448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 214
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262448 ID=DY262448; Name=DY262448; organism=Citrus clementina; type=EST; length=1334bpback to top |