DY262448
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_PSEA7 (Ribonuclease 3 OS=Pseudomonas aeruginosa (strain PA7) GN=rnc PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 7.608e-11 Identity = 57/188 (30.32%), Postives = 86/188 (45.74%), Query Frame = 3 Query: 120 MEDAVFYVENIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNG 683 M + + +E + Y FK++ L+ ALTH SY + +RLEF+GDA L + +F +PQ GQLS LRA + E LA +A GF +V ++ S E + G + +LAD +E++ AIY+D D + I L + L + P T L + Q G Sbjct: 1 MSNPLDRLERKLGYTFKDQDLMVLALTHRSYAGRNN-ERLEFLGDAILNFVIGEALFHHFPQAREGQLSRLRARLVKGETLALLA--RGF-------------EVGDYLRLGSGE----LKSGGFRRESILADAMEALIGAIYLDTGMDSAR-ERIIAWLGPQLRELTPVDTNKDPKTRLQEFLQSRG 167
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_LEGPH (Ribonuclease 3 OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=rnc PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 7.608e-11 Identity = 45/136 (33.09%), Postives = 68/136 (50.00%), Query Frame = 3 Query: 153 INYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVA--VKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVD 554 +NY+F N L++ALTH S S +Y+R EF+GD+ L ++N +F +P GQLS LR+ + E LA +A + G Y F+ + G + +LAD +E+I AAIY+D Sbjct: 12 LNYHFNNIAYLKQALTHCS-AGSDNYERFEFLGDSILSFVIANELFNRFPLHSEGQLSRLRSFLVKGEMLAEIAREIDLGDYLFLGQG---------------------ELRSGGFRRTSILADALEAILAAIYLD 125
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_LEGPC (Ribonuclease 3 OS=Legionella pneumophila (strain Corby) GN=rnc PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 7.608e-11 Identity = 44/134 (32.84%), Postives = 67/134 (50.00%), Query Frame = 3 Query: 153 INYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVD 554 +NY+F N L++ALTH S S +Y+R EF+GD+ L ++N +F +P GQLS LR+ + E LA +A + G ++ L G + +LAD +E+I AAIY+D Sbjct: 12 LNYHFNNIAYLKQALTHCS-AGSDNYERFEFLGDSILSFVIANELFNRFPLHSEGQLSRLRSFLVKGEMLAEIAREIGLGDYLFLGQGEL-------------------RSGGFRRTSILADALEAILAAIYLD 125
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_LEGPA (Ribonuclease 3 OS=Legionella pneumophila (strain Paris) GN=rnc PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 7.608e-11 Identity = 44/134 (32.84%), Postives = 67/134 (50.00%), Query Frame = 3 Query: 153 INYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVD 554 +NY+F N L++ALTH S S +Y+R EF+GD+ L ++N +F +P GQLS LR+ + E LA +A + G ++ L G + +LAD +E+I AAIY+D Sbjct: 12 LNYHFNNIAYLKQALTHCS-AGSDNYERFEFLGDSILSFVIANELFNRFPLHSEGQLSRLRSFLVKGEMLAEIAREIGLGDYLFLGQGEL-------------------RSGGFRRTSILADALEAILAAIYLD 125
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_HELHP (Ribonuclease 3 OS=Helicobacter hepaticus GN=rnc PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 7.608e-11 Identity = 64/244 (26.23%), Postives = 109/244 (44.67%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVA--VKHGFYKFV---------RHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKLAQSM 839 +E + Y F+N++LL EALTH S + +RLEF+GDA L L + Y+F +P G+LS LRA ++ + ++A + G Y ++ R A+ L + + A+ E + ++ D++E Y I DL L+M ++ L+ I + + TL+ + + K +I ++ V G A AS K+ A+ +A+ A KL M Sbjct: 13 LEKKLGYVFQNQQLLLEALTHKSCKKQYNNERLEFLGDAVLDLLVGEYLFKKFPLAKEGELSKLRACIVNEKGFMKLAQSLDLGAYLYISQSEENNNGRQKASILSNAFEALIGAIYLESSLTY------VQSIIYDLLE------YNYIKIDLDSLFMDYKTALQEIT--QAFYGEIPTYTLISESGPDHKKSFEI-----------ALSVQGKEYARASGNSKKEAQQKSAQIAYKKLYSKM 231
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_FRATT (Ribonuclease 3 OS=Francisella tularensis subsp. tularensis GN=rnc PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 7.608e-11 Identity = 47/139 (33.81%), Postives = 72/139 (51.80%), Query Frame = 3 Query: 147 NIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDF 563 NI+ YNFK+ LL ALTH S T +Y+RLEF+GD+ L ++ ++ + L G+LS LR+ + LA++A S+ +D+ + A Q G K K+L D+ E++ AIY+D DF Sbjct: 10 NILGYNFKDYTLLIRALTHRSKTKK-NYERLEFLGDSVLSFVIAEVLYKQFIDLAEGKLSQLRSKLVKGATLAQLA-----------SSLKMDEYI--ILGASEQ--------GGHKREKILEDVFEAVIGAIYLDSDF 126
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_FRAT1 (Ribonuclease 3 OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=rnc PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 7.608e-11 Identity = 47/139 (33.81%), Postives = 72/139 (51.80%), Query Frame = 3 Query: 147 NIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDF 563 NI+ YNFK+ LL ALTH S T +Y+RLEF+GD+ L ++ ++ + L G+LS LR+ + LA++A S+ +D+ + A Q G K K+L D+ E++ AIY+D DF Sbjct: 10 NILGYNFKDYTLLIRALTHRSKTKK-NYERLEFLGDSVLSFVIAEVLYKQFIDLAEGKLSQLRSKLVKGATLAQLA-----------SSLKMDEYI--ILGASEQ--------GGHKREKILEDVFEAVIGAIYLDSDF 126
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_AQUAE (Ribonuclease 3 OS=Aquifex aeolicus GN=rnc PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 7.608e-11 Identity = 59/240 (24.58%), Postives = 106/240 (44.17%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEP--IVTLEELQQQPQPVTLLFKLCQKNGKQ------VDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKLAQS 836 +E + Y FK+K LLE+ALTH SY+ Y+ LEF+GDA + + + + P G LS L+A IS E +A K +KF+R +++ ++ D+ E++ AA+Y+D D +F L + + ++E + + T+L ++ QK K+ + ++ +K I + + + K+ A+ AA E + L +S Sbjct: 7 LEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINE-------------------------TIIGDVFEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHHKKKFIVEAKIK-EYRTLGEGKSKKEAEQRAAEELIKLLEES 220
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_RICRS (Ribonuclease 3 OS=Rickettsia rickettsii (strain Sheila Smith) GN=rnc PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 9.937e-11 Identity = 51/197 (25.89%), Postives = 89/197 (45.18%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSS------YTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFD-----LQKLWMIFRGL-----LEPIVTLEELQQQPQPVTLLFKLCQKNG 683 +E +++Y+FKNK LL EAL+H S Y D Y+RLEF+GDA L L ++ +F + + G L+ +R+ + E + V K ++ + E DN + + E++ AAIY+D + + ++KLW F + +P L+E Q +++L ++ G Sbjct: 7 LEKLLSYSFKNKELLIEALSHPSLRQHHEYKDDKDYERLEFLGDAVLNLVITEILFRNFANYNEGNLAKIRSYLVCKETICMVGAKLTLKNYI---------IMTHGEEVAGGRDNL----------NNIENATEALIAAIYLDSNIETTHDIIEKLWAEFIKVQNLTDYDPKTALQEWAQASDHHLPIYRLIKREG 184
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_RICRO (Ribonuclease 3 OS=Rickettsia rickettsii (strain Iowa) GN=rnc PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 9.937e-11 Identity = 51/197 (25.89%), Postives = 89/197 (45.18%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSS------YTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFD-----LQKLWMIFRGL-----LEPIVTLEELQQQPQPVTLLFKLCQKNG 683 +E +++Y+FKNK LL EAL+H S Y D Y+RLEF+GDA L L ++ +F + + G L+ +R+ + E + V K ++ + E DN + + E++ AAIY+D + + ++KLW F + +P L+E Q +++L ++ G Sbjct: 7 LEKLLSYSFKNKELLIEALSHPSLRQHHEYKDDKDYERLEFLGDAVLNLVITEILFRNFANYNEGNLAKIRSYLVCKETICMVGAKLTLKNYI---------IMTHGEEVAGGRDNL----------NNIENATEALIAAIYLDSNIETTHDIIEKLWAEFIKVQNLTDYDPKTALQEWAQASDHHLPIYRLIKREG 184 The following BLAST results are available for this feature:
BLAST of DY262448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 214
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262448 ID=DY262448; Name=DY262448; organism=Citrus clementina; type=EST; length=1334bpback to top |