DY262448
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_CAMFF (Ribonuclease 3 OS=Campylobacter fetus subsp. fetus (strain 82-40) GN=rnc PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.026e-15 Identity = 72/246 (29.27%), Postives = 116/246 (47.15%), Query Frame = 3 Query: 126 DAVFYVENIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEP--------------IVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNI-ASVYVDGSFVASASSEQKEIAKLNAAREAL 818 D + +E + Y FKNK LL+EALTH S S + +RLEF+GDA L L + Y+F + D G LS LRAA ++ + A ++ + F+ SAA EDN P +++D +E++ AIY ++ L+ + IF LLE TL+E+ Q VT ++L +G ++K+ +V+++ +A A K+ A+ +AA + L Sbjct: 2 DKLNRLEEHLGYKFKNKTLLKEALTHKSMKSSVNNERLEFLGDAVLDLIVGEYLFFKFKDTDEGNLSKLRAALVNEKSFASISSQIRLGDFLYLSAA---------------EDN----NNGRNKPSLVSDALEALMGAIY--LESGLEAVKKIFINLLESQYNNIDLQSLGKDYKTTLQEITQARFGVTPRYELVSSSGPD--------HKKSFEMAVFLNDKELARAIGNSKKEAEQSAAWKVL 218
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: DCL1_ASPTN (Dicer-like protein 1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=dcl1 PE=3 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 1.026e-15 Identity = 72/250 (28.80%), Postives = 122/250 (48.80%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSSYTDSTS----YQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAE----AVSQEDNTAVYGGSIK-APKV-LADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPI---VTLEELQQQPQPVTLLF-KLCQKNG------KQVDIKHWRKNRKNI-ASVYVDGSFVASASSEQKEIAKLNAAREALXKL 827 VE + Y+F+ RLL A TH SY + + YQ LEF+GDA L + +F +P DP L+ + A +S + L +AVK G + + + ++AL ++ +AE A SQ D Y + PKV L D+VE+ A++VD +F +++ + F+ ++P + + + P T L KL + G K +I + + A+V V + + + + AK+ A+ AL +L Sbjct: 1238 VEEKLGYHFRYPRLLHSAFTHPSYPSAWARVPCYQSLEFLGDALLDMVCVEDLFRRFPDRDPQWLTEHKMAMVSNKFLGALAVKLGLHTHLSYFSSALQSQITHYAEEAQAAASQSDVAVDYWTLTQDPPKVCLPDMVEAYLGAVFVDSNFRFEEVEVFFQQHIKPYFHDMAIYDTFANRHPTTFLHNKLTNEYGCLNYCLKAGEIPGADGDASTVLAAVIVHDTILTTGVASSGRYAKVKASENALTEL 1487
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_MYCCT (Ribonuclease 3 OS=Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154) GN=rnc PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.750e-15 Identity = 67/247 (27.13%), Postives = 120/247 (48.58%), Query Frame = 3 Query: 159 YNFK--NKRLLEEALTHSSYTDST----SYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWM---IFRGLLEP--IVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRK---------NIASVYVDGSFVASASSEQKEIAKLNAAREALXKLAQSM 839 YN K ++++ +EALTH+SY + SYQRLEF+GDA L + +S ++F Y +L G+L+ LR++ + E L+R+A + +R L K + +LADI E++ AA+Y+D + D +W+ +F+ + +P I ++ + + Q + ++ K+ D+K+ +N + SV +DG K+ A+ NAA + L KL + + Sbjct: 10 YNIKINDQQIYKEALTHNSYANERKLKYSYQRLEFLGDAILQMYVSKFLFFHYSKLGEGELTRLRSSTVREESLSRIAKDINLGQLIRLGHGELMTK-------------------GYEKQSILADIFEALTAAVYIDQNEDGLLIWLEQTLFKYMKDPTFINVTKDFKSELQELL-------QSEKRSDLKYIIENEEFFVNENKTLYTVSVNLDGQKFGVGKGYSKQEAEQNAASDCLSKLKKPL 230
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_ENTFA (Ribonuclease 3 OS=Enterococcus faecalis GN=rnc PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.750e-15 Identity = 66/240 (27.50%), Postives = 115/240 (47.92%), Query Frame = 3 Query: 165 FKNKRLLEEALTHSSYTDSTSY------QRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWM-----------IFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKLAQ 833 F + LLE+A THSSY + Y +RLEF+GDA L L +S Y++L +P+L G+L+ +RAA + + LA+ A + F ++ L K +E + GG +A +L D+ E+ A+Y+D K ++ F ++ L+E+ Q+ V++ ++L ++ G D R VY++G + + K++A+ +AA AL + Q Sbjct: 17 FHDVNLLEQAFTHSSYVNEHRYLKLSDNERLEFLGDAVLELIVSQYLYLKFPELPEGKLTKMRAAIVREDSLAKFAKECHFDNYI------LLGKGEEAS------------GGRTRA-SLLCDLFEAFLGALYLDQKVGAAKKFIEDVIFPKIDAGAFSHEMDHKTQLQEVLQRKGDVSIEYRLIKEEGPAHD-------RTFFTEVYMNGELIGLGQGKSKKLAEQDAAERALKSIPQ 230
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: DCL1_CRYPA (Dicer-like protein 1 OS=Cryphonectria parasitica GN=DCL-1 PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.750e-15 Identity = 74/293 (25.26%), Postives = 123/293 (41.98%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSS----YTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQ-----EDNTAVYGGSIKA------------PKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPI---VTLEELQQQPQPVTLLFKL------CQKNG---KQVDIKH----WRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKL--------AQSMPVNCDVCEIFDDIDE 884 + Y FK+ R+L A H S + YQRLEF+GDA +A +Y+F P P L+ + A +S + L +AV GF+KF+ H A++ ++ E+ +++ ED G A PK + D++E+ AI+VD +D + F + P + + + PVT + C G +++ +K + +A + + G V A + AK+ AAR+AL KL + +C E +DI E Sbjct: 1251 IHEATGYQFKHPRVLRSAFRHPSRPYVFDKVPHYQRLEFLGDALFDMACVDYLFHIAPDEGPQWLTEHKMAMVSNQFLGCLAVSLGFHKFILHHHASIGSQIHEYVTEITEARRAAEDAAEAAGKPRSAYSRDYWVEAPQPPKCIPDVLEAYVGAIFVDSKYDYSVVQQFFHAHVLPFFASMRMYDTFANKHPVTFFTQYVFETFGCHAYGLHAEEMPVKDDTGLVTGKTQVVAGILLHGQVVEGAVRDSGRYAKIAAARKALDKLRSMTRQEFLDAYKCDCKPGEAAEDISE 1543
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_LACS1 (Ribonuclease 3 OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=rnc PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.286e-15 Identity = 63/238 (26.47%), Postives = 113/238 (47.48%), Query Frame = 3 Query: 156 NYNFKNKRLLEEALTHSSYTDSTS--------YQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGK------QVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKL 827 N FK+ LL+ A TH+SY + T Y+R+EF+GDA + L +S Y++ YP++ G++S LRAA + + ++ A++ F +++R ++K G + + P +L DI ES A+Y+D D ++ ++ P + L T L ++ Q+NG+ +V++ R +V V+ + + K+ A+ AA +AL KL Sbjct: 14 NITFKDVDLLDAAFTHASYVNETPERKKKLKYYERIEFLGDAVMQLCVSEYIYEHYPEMPEGKMSRLRAAMVRADSFSKFAIECHFNEYIRLGKG--EEK-----------------GNARQRPSLLCDIFESFIGALYLDQGKD--EVVRFISKVIFPKLELGWFDHMMDNKTELQEVLQQNGECKIKYNEVNVTGPDNERVYTMNVVVNNEVMGEGTGRTKKAAEQMAAYQALKKL 230
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_BACHK (Ribonuclease 3 OS=Bacillus thuringiensis subsp. konkukian GN=rnc PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 2.985e-15 Identity = 69/248 (27.82%), Postives = 114/248 (45.97%), Query Frame = 3 Query: 153 INYNFKNKRLLEEALTHSSYTDS------TSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVT-------------LEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKLAQSM 839 I F +++LL +A THSSY + +RLEF+GDA L L +S Y+F YP + G+L+ LRAA + L R A + F V L K +E G + P +LAD+ E+ A+Y +D L+ +W + ++ P + L+EL Q+ + +++ Q+ G NR+ ++ V ++ + S + K+ A+ AA EAL KL + + Sbjct: 26 IGITFTDEKLLIQAFTHSSYVNEHRKKPHEDNERLEFLGDAVLELTVSQYLFQKYPTMSEGELTKLRAAIVCEPSLVRFANELSFGSLV------LLGKGEEMT-------------GGRERPALLADVFEAFIGALY--LDQGLETVWGFLKEIVYPKINEGAFSHVMDYKSQLQELIQRDGSGNIEYQILQEKGP-------AHNREFVSRVTLNNVALGLGSGKSKKEAEQQAAAEALKKLKEQL 245
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_BACCR (Ribonuclease 3 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=rnc PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 2.985e-15 Identity = 69/248 (27.82%), Postives = 114/248 (45.97%), Query Frame = 3 Query: 153 INYNFKNKRLLEEALTHSSYTDS------TSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVT-------------LEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKLAQSM 839 I F +++LL +A THSSY + +RLEF+GDA L L +S Y+F YP + G+L+ LRAA + L R A + F V L K +E G + P +LAD+ E+ A+Y +D L+ +W + ++ P + L+EL Q+ + +++ Q+ G NR+ ++ V ++ + S + K+ A+ AA EAL KL + + Sbjct: 26 IGITFTDEKLLIQAFTHSSYVNEHRKKPHEDNERLEFLGDAVLELTVSQYLFQKYPTMSEGELTKLRAAIVCEPSLVRFANELSFGSLV------LLGKGEEMT-------------GGRERPALLADVFEAFIGALY--LDQGLETVWEFLKEIVYPKINEGAFSHVMDYKSQLQELIQRDGSGNVEYQILQEKGP-------AHNREFVSRVTLNNVALGLGSGKSKKEAEQQAAAEALKKLKEQL 245
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_BACCQ (Ribonuclease 3 OS=Bacillus cereus (strain Q1) GN=rnc PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 2.985e-15 Identity = 69/248 (27.82%), Postives = 114/248 (45.97%), Query Frame = 3 Query: 153 INYNFKNKRLLEEALTHSSYTDS------TSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVT-------------LEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKLAQSM 839 I F +++LL +A THSSY + +RLEF+GDA L L +S Y+F YP + G+L+ LRAA + L R A + F V L K +E G + P +LAD+ E+ A+Y +D L+ +W + ++ P + L+EL Q+ + +++ Q+ G NR+ ++ V ++ + S + K+ A+ AA EAL KL + + Sbjct: 26 IGITFTDEKLLIQAFTHSSYVNEHRKKPHEDNERLEFLGDAVLELTVSQYLFQKYPTMSEGELTKLRAAIVCEPSLVRFANELSFGSLV------LLGKGEEMT-------------GGRERPALLADVFEAFIGALY--LDQGLETVWGFLKEIVYPKINEGAFSHVMDYKSQLQELIQRDGSGNIEYQILQEKGP-------AHNREFVSRVTLNNVALGLGSGKSKKEAEQQAAAEALKKLKEQL 245
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_BACCN (Ribonuclease 3 OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=rnc PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 2.985e-15 Identity = 69/246 (28.05%), Postives = 112/246 (45.53%), Query Frame = 3 Query: 153 INYNFKNKRLLEEALTHSSYTDS------TSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVT-------------LEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKLAQ 833 + F N++LL +A THSSY + +RLEF+GDA L L +S Y+F YP + G+L+ LRAA + L R A + F V L K +E G + P +LAD+ E+ A+Y+D D +W + ++ P + L+EL Q+ + +++ Q+ G NR+ ++ V ++ + S + K+ A+ AA EAL KL + Sbjct: 26 LGITFTNEKLLIQAFTHSSYVNEHRKKPHEDNERLEFLGDAVLELTVSQYLFQKYPTMSEGELTKLRAAIVCEPSLVRFANELSFGSLV------LLGKGEEMT-------------GGRERPALLADVFEAFIGALYLDQGLD--TVWGFLKEIVYPKINEGAFSHVMDYKSQLQELIQRDGSGNIEYQILQEKGP-------AHNREFVSRVTLNSVALGLGSGKSKKEAEQQAAAEALRKLKE 243 The following BLAST results are available for this feature:
BLAST of DY262448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 214
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262448 ID=DY262448; Name=DY262448; organism=Citrus clementina; type=EST; length=1334bpback to top |