DY262842

Overview
NameDY262842
Unique NameDY262842
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1315
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262842 vs. ExPASy Swiss-Prot
Match: RPIA_STRPD (Ribose-5-phosphate isomerase A OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=rpiA PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 2.158e-34
Identity = 87/192 (45.31%), Postives = 115/192 (59.90%), Query Frame = 1
Query:  304 DELKKIAAYKAVEFVESGMVLGLGTGSTAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGEQPFVTDNGNYVIDLYLKKDIGDLK 879
            + LKKIA   A ++V  GM +GLGTGSTA + V+ IG  ++Q  L  +VG+ TS  T +QA  LGIPL  +D    +DL +DGADEVD   N +KG G +LL EK+V    K+++ +VD SK+V HLG     +PVEVV Y     A RL  +FE  G     R  G+   VTD  NY+IDL    D+G +K
Sbjct:    2 EALKKIAGVTAAQYVTDGMTIGLGTGSTAYYFVEEIGRRVKQEGL-QVVGVTTSSVTSKQAEGLGIPLKSIDDIDSIDLTVDGADEVDKDFNGIKGGGAALLMEKIVATPTKEYIWVVDASKMVEHLG--AFKLPVEVVQY----GADRLFRVFEKAGYKPSFRMKGDSRLVTDMQNYIIDL----DLGCIK 182          
BLAST of DY262842 vs. ExPASy Swiss-Prot
Match: RPIA_STRPC (Ribose-5-phosphate isomerase A OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=rpiA PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 2.158e-34
Identity = 87/192 (45.31%), Postives = 115/192 (59.90%), Query Frame = 1
Query:  304 DELKKIAAYKAVEFVESGMVLGLGTGSTAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGEQPFVTDNGNYVIDLYLKKDIGDLK 879
            + LKKIA   A ++V  GM +GLGTGSTA + V+ IG  ++Q  L  +VG+ TS  T +QA  LGIPL  +D    +DL +DGADEVD   N +KG G +LL EK+V    K+++ +VD SK+V HLG     +PVEVV Y     A RL  +FE  G     R  G+   VTD  NY+IDL    D+G +K
Sbjct:    2 EALKKIAGVTAAQYVTDGMTIGLGTGSTAYYFVEEIGRRVKQEGL-QVVGVTTSSVTSKQAEGLGIPLKSIDDIDSIDLTVDGADEVDKDFNGIKGGGAALLMEKIVATPTKEYIWVVDASKMVEHLG--AFKLPVEVVQY----GADRLFRVFEKAGYKPSFRMKGDSRLVTDMQNYIIDL----DLGCIK 182          
BLAST of DY262842 vs. ExPASy Swiss-Prot
Match: RPIA_STRPB (Ribose-5-phosphate isomerase A OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=rpiA PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 2.158e-34
Identity = 87/192 (45.31%), Postives = 115/192 (59.90%), Query Frame = 1
Query:  304 DELKKIAAYKAVEFVESGMVLGLGTGSTAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGEQPFVTDNGNYVIDLYLKKDIGDLK 879
            + LKKIA   A ++V  GM +GLGTGSTA + V+ IG  ++Q  L  +VG+ TS  T +QA  LGIPL  +D    +DL +DGADEVD   N +KG G +LL EK+V    K+++ +VD SK+V HLG     +PVEVV Y     A RL  +FE  G     R  G+   VTD  NY+IDL    D+G +K
Sbjct:    2 EALKKIAGVTAAQYVTDGMTIGLGTGSTAYYFVEEIGRRVKQEGL-QVVGVTTSSVTSKQAEGLGIPLKSIDDIDSIDLTVDGADEVDKDFNGIKGGGAALLMEKIVATPTKEYIWVVDASKMVEHLG--AFKLPVEVVQY----GADRLFRVFEKAGYKPSFRMKGDSRLVTDMQNYIIDL----DLGCIK 182          
BLAST of DY262842 vs. ExPASy Swiss-Prot
Match: RPIA_STRSV (Ribose-5-phosphate isomerase A OS=Streptococcus sanguinis (strain SK36) GN=rpiA PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 2.818e-34
Identity = 86/184 (46.74%), Postives = 114/184 (61.96%), Query Frame = 1
Query:  304 DELKKIAAYKAVEFVESGMVLGLGTGSTAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGEQPFVTDNGNYVIDLYL 855
            + LKK+A  KA EFV+SGM++GLGTGSTA + V+ IG  +++  L  I  + TS  T +QA  LGIPL  +D    VD+ +DGADEVD   N +KG GG+LL EK+V    K ++ +VDESK+V  LG     +PVEVV Y     A++L   FE  G     R   +Q FVTD  N++IDL L
Sbjct:    2 ENLKKLAGIKAAEFVQSGMIVGLGTGSTAYYFVEEIGRRIKEEGL-QITAVTTSSVTSKQAEGLGIPLKSIDDVDQVDVTVDGADEVDSAFNGIKGGGGALLMEKVVAVPTKHYIWVVDESKMVEKLG--AFKLPVEVVQY----GAEQLFRRFERAGYKPAFREKDDQRFVTDMQNFIIDLDL 178          
BLAST of DY262842 vs. ExPASy Swiss-Prot
Match: RPIA_STRS7 (Ribose-5-phosphate isomerase A OS=Streptococcus equi subsp. zooepidemicus (strain H70) GN=rpiA PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 2.818e-34
Identity = 83/184 (45.11%), Postives = 114/184 (61.96%), Query Frame = 1
Query:  304 DELKKIAAYKAVEFVESGMVLGLGTGSTAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGEQPFVTDNGNYVIDLYL 855
            + LKK+A   A ++V  GM +GLGTGSTA + V+ IG  +++  L  +VG+ TS  T +QA  LGIPL+ +D    +DL +DGADEVD   N +KG G +LL EK+V    K+++ +VDESKLV HLG     +PVEVV Y     A RL  +FE  G     R  G++  +TD  N++IDL L
Sbjct:    2 EALKKLAGVTAAQYVTDGMTIGLGTGSTAYYFVEEIGRRIKEEGL-QVVGVTTSSVTTKQAEGLGIPLTSIDDIDCIDLTVDGADEVDKAFNGIKGGGAALLMEKIVATPTKEYIWVVDESKLVDHLG--AFKLPVEVVQY----GADRLFRVFERAGYKPSFRMKGDKRLITDMQNFIIDLDL 178          
BLAST of DY262842 vs. ExPASy Swiss-Prot
Match: RPIA_STRP6 (Ribose-5-phosphate isomerase A OS=Streptococcus pyogenes serotype M6 GN=rpiA PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 2.818e-34
Identity = 87/190 (45.79%), Postives = 114/190 (60.00%), Query Frame = 1
Query:  310 LKKIAAYKAVEFVESGMVLGLGTGSTAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGEQPFVTDNGNYVIDLYLKKDIGDLK 879
            LKKIA   A ++V  GM +GLGTGSTA + V+ IG  ++Q  L  +VG+ TS  T +QA  LGIPL  +D    +DL +DGADEVD   N +KG G +LL EK+V    K+++ +VD SK+V HLG     +PVEVV Y     A RL  +FE  G     R  G+   VTD  NY+IDL    D+G +K
Sbjct:    4 LKKIAGVTAAQYVTDGMTIGLGTGSTAYYFVEEIGRRVKQEGL-QVVGVTTSSVTSKQAEGLGIPLKSIDDIDSIDLTVDGADEVDKDFNGIKGGGAALLMEKIVATPTKEYIWVVDASKMVEHLG--AFKLPVEVVQY----GADRLFRVFEKAGYKPSFRMKGDSRLVTDMQNYIIDL----DLGCIK 182          
BLAST of DY262842 vs. ExPASy Swiss-Prot
Match: RPIA_STRMU (Ribose-5-phosphate isomerase A OS=Streptococcus mutans GN=rpiA PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 2.818e-34
Identity = 85/184 (46.20%), Postives = 116/184 (63.04%), Query Frame = 1
Query:  304 DELKKIAAYKAVEFVESGMVLGLGTGSTAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGEQPFVTDNGNYVIDLYL 855
            +ELKKIA  +A ++VE GM++GLGTGSTA + V+ +G  +++  L  ++G+ TS +T  QA +LGIPL  +D    VD+ +DGADEVDP  N +KG GG+LL EK+V    K ++ +VDESK+V  LG     +PVEVV Y     A+RL   FE  G     R      FVTD  N++IDL L
Sbjct:    2 EELKKIAGVRAAQYVEDGMIVGLGTGSTAYYFVEEVGRRVQEEGL-QVIGVTTSSRTTAQAQALGIPLKSIDEVDSVDVTVDGADEVDPNFNGIKGGGGALLMEKIVGTLTKDYIWVVDESKMVDTLG--AFRLPVEVVQY----GAERLFREFEKKGYKPSFREYDGVRFVTDMKNFIIDLDL 178          
BLAST of DY262842 vs. ExPASy Swiss-Prot
Match: RPIA_STREM (Ribose-5-phosphate isomerase A OS=Streptococcus equi subsp. zooepidemicus (strain MGCS10565) GN=rpiA PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 2.818e-34
Identity = 83/184 (45.11%), Postives = 114/184 (61.96%), Query Frame = 1
Query:  304 DELKKIAAYKAVEFVESGMVLGLGTGSTAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGEQPFVTDNGNYVIDLYL 855
            + LKK+A   A ++V  GM +GLGTGSTA + V+ IG  +++  L  +VG+ TS  T +QA  LGIPL+ +D    +DL +DGADEVD   N +KG G +LL EK+V    K+++ +VDESKLV HLG     +PVEVV Y     A RL  +FE  G     R  G++  +TD  N++IDL L
Sbjct:    2 EALKKLAGVTAAQYVTDGMTIGLGTGSTAYYFVEEIGRRIKEEGL-QVVGVTTSSVTTKQAEGLGIPLTSIDDIDCIDLTVDGADEVDKAFNGIKGGGAALLMEKIVATPTKEYIWVVDESKLVDHLG--AFKLPVEVVQY----GADRLFRVFERAGYKPSFRMKGDKRLITDMQNFIIDLDL 178          
BLAST of DY262842 vs. ExPASy Swiss-Prot
Match: RPIA_RHISN (Ribose-5-phosphate isomerase A OS=Rhizobium sp. (strain NGR234) GN=rpiA PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 2.818e-34
Identity = 88/216 (40.74%), Postives = 128/216 (59.26%), Query Frame = 1
Query:  307 ELKKIAAYKAVEFVESGMVLGLGTGSTAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAK--LRTTGEQPFVTDNGNYVIDLYLKKDIGDLKVQATTFCGLPVFVKHRMFLDMAT 948
            ++K  AA  A+ +VESGM LG+GTGSTA+  V  + E +  G    I G+PTS++T    + LG+PL  LD  P +DL IDGADEVD  + L+KG GG+LLREK+V  A ++ +VI DESK+V  LG     +P+EV  +    T   ++ +    G      LR +G+ PF+TD G+ ++D    + I D +  A     +P  V+H +FL MA+
Sbjct:    5 QMKIKAAQAALGYVESGMRLGIGTGSTAEEFVRLLAEKVASG--FQIQGVPTSERTARLCLELGVPLKSLDELPELDLTIDGADEVDGKLRLIKGGGGALLREKIVASASERMIVIADESKVVDVLG--AFKLPIEVNQFGLTTTRLAIEKVAARLGLTGDIGLRASGDGPFMTDGGHLILDASFGR-IPDAEALAAGLNAIPGVVEHGLFLGMAS 215          
BLAST of DY262842 vs. ExPASy Swiss-Prot
Match: RPIA_SYNPX (Ribose-5-phosphate isomerase A OS=Synechococcus sp. (strain WH8102) GN=rpiA PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 3.680e-34
Identity = 88/220 (40.00%), Postives = 128/220 (58.18%), Query Frame = 1
Query:  301 QDELKKIAAYKAVEFVESGMVLGLGTGSTAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGEQ--PFVTDNGNYVIDLYLKKDIGDLKVQATTFCGLPVFVKHRMFLDMATTV 954
            Q ++K+  A  AVE ++ GMVLGLG+GSTA   +  +G  L  G+L +IVG+ TS +    A  L IPL  L++   +DLAIDGADEVDP   L+KG G   ++EK+V     +FVV+VD +KLV  L   G  +PVEV+P  W+   ++L  L    G  A+LR    +  P VTD GN V+D+ +   I D     +T   +P  +++ +F+D+   V
Sbjct:    5 QTQMKQAVADAAVEQIKDGMVLGLGSGSTAALMIKALGAKLASGELKDIVGVTTSFQGEVLAAELNIPLLSLNAVDRIDLAIDGADEVDPGFQLIKGGGACHVQEKLVAARADRFVVVVDSTKLVERL-NLGFLLPVEVLPGAWRQVQQQLAAL----GGKAELRMAQRKAGPVVTDQGNLVLDVTMNGGISDPAALESTVNNIPGVLENGLFVDLVDEV 219          
The following BLAST results are available for this feature:
BLAST of DY262842 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 459
Match NameE-valueIdentityDescription
RPIA_STRPD2.158e-3445.31Ribose-5-phosphate isomerase A OS=Streptococcus py... [more]
RPIA_STRPC2.158e-3445.31Ribose-5-phosphate isomerase A OS=Streptococcus py... [more]
RPIA_STRPB2.158e-3445.31Ribose-5-phosphate isomerase A OS=Streptococcus py... [more]
RPIA_STRSV2.818e-3446.74Ribose-5-phosphate isomerase A OS=Streptococcus sa... [more]
RPIA_STRS72.818e-3445.11Ribose-5-phosphate isomerase A OS=Streptococcus eq... [more]
RPIA_STRP62.818e-3445.79Ribose-5-phosphate isomerase A OS=Streptococcus py... [more]
RPIA_STRMU2.818e-3446.20Ribose-5-phosphate isomerase A OS=Streptococcus mu... [more]
RPIA_STREM2.818e-3445.11Ribose-5-phosphate isomerase A OS=Streptococcus eq... [more]
RPIA_RHISN2.818e-3440.74Ribose-5-phosphate isomerase A OS=Rhizobium sp. (s... [more]
RPIA_SYNPX3.680e-3440.00Ribose-5-phosphate isomerase A OS=Synechococcus sp... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10AD10RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262842 ID=DY262842; Name=DY262842; organism=Citrus clementina; type=EST; length=1315bp
CGCCACCCTCCCTTTTCTTTCTTCCCCTCTCTCTCTAGAGTCTCTATAAA
TAAGACCCTTTCTGGCTTTCTCATCCACACGCATTCACAACCATCCAATC
CCAATCCCTCCTCTCCCATTCAGAAGTAAAAAAAAAAAACTCTTCATTCA
ATCTTTTCATCAAACACCCCGCTGTTTCTCTTAACATTCCTCTGAATCCC
CTTCCCTGTAGAAATGGCTATCGCTATTTCTGCAGAGAAACTGTCTTCTG
TGGAGACTGGTTTGTCTCCTTTATCTTCCCCTCCGCCGGTGATTCTGACC
CAAGACGAGCTCAAGAAGATTGCTGCTTACAAGGCCGTTGAGTTTGTCGA
ATCCGGGATGGTTCTCGGCCTCGGCACCGGCTCCACCGCCAAGCACGCCG
TTGACAGAATCGGCGAGTTGTTGCGCCAAGGCAAGCTCACCAACATTGTG
GGGATACCCACCTCCAAGAAGACTCACGAACAGGCCGTTTCGCTCGGTAT
TCCTCTCTCAGATCTTGACTCGTATCCCGTCGTTGATTTGGCAATCGACG
GCGCTGACGAAGTCGATCCCTTCATGAATTTGGTCAAAGGCCGGGGTGGG
TCCTTGTTGAGGGAGAAGATGGTGGAGGGTGCCTGTAAGAAGTTTGTTGT
TATTGTCGACGAGTCCAAGCTGGTGCCTCATCTCGGAGGGAGCGGCCTGG
CCATGCCCGTTGAAGTGGTGCCGTACTGTTGGAAGTTTACGGCCAAGAGG
CTTCAGGATTTGTTTGAGGATTGTGGCTGTGTTGCCAAGCTCAGAACCAC
CGGTGAGCAGCCGTTTGTCACCGATAATGGCAACTACGTTATTGATTTGT
ATTTGAAGAAAGACATTGGCGATTTGAAAGTGCAAGCGACAACATTTTGC
GGCTTGCCGGTGTTTGTGAAGCACCGGATGTTTCTTGATATGGCTACAAC
TGTGGATTGTAGCGAGCGAGCTCGGCGTTACATTAAGAAAAAAAAATGAT
TTTTTTTTAATTTTTAATTTTAAACGGGTCAAGTCTAATTCCCAAGTGAA
TTTGGGGCACATTGGCTTGGGTAAACAAAAAAAAAAAAGGGAATTTTGGG
GGCCATTTTTTAAAGAAATGGAGAAATTCCCCGGTAATAAAGAGGGACCT
TCAAAATTTTTTTTTGAAAAAATTATAAAAAAAGAAATAAAGGGGAATTT
CTAAAAAAAAAAATAAAAGGAGAAAAAGGAAAAAAAGGGGGGAAACAAAA
AAATATAACTTTTTTTTTTTTTTTTTAAAAGAAATATATTTTCCTCTGGT
GTTTTAAAATATAAA
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