DY262842
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262842 vs. ExPASy Swiss-Prot
Match: RPIA_ARATH (Probable ribose-5-phosphate isomerase OS=Arabidopsis thaliana GN=At2g01290 PE=2 SV=1) HSP 1 Score: 331.643 bits (849), Expect = 6.177e-90 Identity = 166/222 (74.77%), Postives = 195/222 (87.84%), Query Frame = 1 Query: 295 LTQDELKKIAAYKAVEFVESGMVLGLGTGSTAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGE--QPFVTDNGNYVIDLYLKKDIGDLKVQATTFCGLPVFVKHRMFLDMATTV 954 LTQDELK+IAAYKAVEFVESGMVLGLGTGSTAKHAVDRIGELLRQGKL NIVGIPTSKKT EQA+SLGIPLSDLD++PV+DL+IDGADEVDPF+NLVKGRGGSLLREKM+EGA KKFVVIVD+SK+V H+GGS LA+PVE+VP+CWKFTA++L+ L E GC A LR GE + FVTDNGNY++D+++++D+GDL + LP V+H MFLDMA+TV Sbjct: 31 LTQDELKRIAAYKAVEFVESGMVLGLGTGSTAKHAVDRIGELLRQGKLENIVGIPTSKKTQEQALSLGIPLSDLDAHPVIDLSIDGADEVDPFLNLVKGRGGSLLREKMIEGASKKFVVIVDDSKMVKHIGGSKLALPVEIVPFCWKFTAEKLRSLLEGYGCEANLR-LGEKGKAFVTDNGNYIVDMHVEEDMGDLGAVSDAILRLPGVVEHGMFLDMASTV 251
BLAST of DY262842 vs. ExPASy Swiss-Prot
Match: RPIA_PYRKO (Ribose-5-phosphate isomerase A OS=Pyrococcus kodakaraensis GN=rpiA PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 5.302e-41 Identity = 91/221 (41.18%), Postives = 143/221 (64.71%), Query Frame = 1 Query: 304 DELKKIAAYKAVEFVESGMVLGLGTGSTAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGEQ--PFVTDNGNYVIDLYLKK--DIGDLKVQATTFCGLPVFVKHRMFLDMATTV 954 +E+KK A +A++F+E MV+GLGTGST + ++ +G+LL +G+L ++ G+PTS + A+ GIP+ LD +D+A+DGADEVDP MNL+KGRG +L EK++E F+V+VDESKLV +L G + +P+EV+P W+ A+ L E A+LR ++ P VTDNGN+++D + D DL+++ T +P V++ +F D+A + Sbjct: 4 EEMKKAVAKEALKFIEDEMVVGLGTGSTTAYFINYLGKLLMEGELEDVYGVPTSHQARLLALEAGIPVVSLDEVDAIDIAVDGADEVDPHMNLIKGRGAALTMEKIIEYRAGMFIVLVDESKLVEYL-GQKMPVPIEVIPAAWRAIAEEL----EVFNATAELRMAVKKDGPVVTDNGNFILDAKFARIEDPLDLEIELNT---IPGVVENGIFADIADII 216
BLAST of DY262842 vs. ExPASy Swiss-Prot
Match: RPIA_SYNJA (Ribose-5-phosphate isomerase A OS=Synechococcus sp. (strain JA-3-3Ab) GN=rpiA PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 1.543e-40 Identity = 100/217 (46.08%), Postives = 140/217 (64.52%), Query Frame = 1 Query: 304 DELKKIAAYKAVEFVESGMVLGLGTGSTAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVD-PFMNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGE-QPFVTDNGNYVIDLYLKKDIGDLKVQATTFCGLPVFVKHRMFLDMAT 948 DELK+ AA A + V+SGMV+GLGTGSTA AV + + +++ L +G+PTS++T EQA SLGIPL+ L+ P +DLAIDGADE++ +NL+KG GG+LLREK+VE + + ++I D SK V HL G+ +PVEVV + WK T R++ L GC A LR T E P++TD +Y++D K+ A G V+H +F+ MAT Sbjct: 5 DELKQAAAQAAAQKVQSGMVVGLGTGSTAAFAVGALAQRMQKEGL-QFIGVPTSERTAEQARSLGIPLATLEEQPRLDLAIDGADEIEVGSLNLIKGAGGALLREKLVEASAAELIIIADASKKVAHL-GTRFPVPVEVVRFGWKTTLARVEAL----GCQAVLRRTAEGDPYLTDEQHYILDCQFGPIANPAKL-AEQLKGTVGVVEHGLFIGMAT 214
BLAST of DY262842 vs. ExPASy Swiss-Prot
Match: RPIA_PYRAB (Ribose-5-phosphate isomerase A OS=Pyrococcus abyssi GN=rpiA PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 2.631e-40 Identity = 88/221 (39.82%), Postives = 144/221 (65.16%), Query Frame = 1 Query: 304 DELKKIAAYKAVEFVESGMVLGLGTGSTAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLR--TTGEQPFVTDNGNYVIDLYLKK--DIGDLKVQATTFCGLPVFVKHRMFLDMATTV 954 +E+KKIAA +A++F+E MV+GLGTGST + + +G+++++G++++IVG+PTS ++ A+ GIP++ LD +D+A+DGADEVDP +NL+KGRG +L EK++E F+V+VDE KLV +L + +P+EV+P W+ + L AKLR + P +TDNGN++ID + D D++++ T +P V++ +F D+A V Sbjct: 4 EEMKKIAAKEALKFIEDDMVIGLGTGSTTAYFIRLLGDMIKKGEVSDIVGVPTSYQSRLLAIESGIPVATLDQVDAIDVAVDGADEVDPNLNLIKGRGAALTMEKIIESRAGMFIVLVDERKLVDYL-CQKMPVPIEVIPQAWRAIVEELSIF----NAEAKLRMGVNKDGPVITDNGNFIIDAKFPRIDDPLDMEIELNT---IPGVVENGIFADIADIV 216
BLAST of DY262842 vs. ExPASy Swiss-Prot
Match: RPIA_DESAA (Ribose-5-phosphate isomerase A OS=Desulfatibacillum alkenivorans (strain AK-01) GN=rpiA PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 2.631e-40 Identity = 97/184 (52.72%), Postives = 127/184 (69.02%), Query Frame = 1 Query: 298 TQDELKKIAAYKAVEFVESGMVLGLGTGSTAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTG-EQPFVTDNGNYVID 846 +QD LKK AA KAVE++ESGMV+GLG+GSTA A+ I L+++GKL +IVGIP+S T E A SLGIPL + + V+D+ IDGADEVDP +NL+KG GG+LLREK+V A KK ++IVDESK+ L G+ A+PVEVVP+ TA + L E G +R + F TDN N ++D Sbjct: 3 SQDALKKQAAEKAVEYLESGMVVGLGSGSTATFAIHAIARLMKEGKLKDIVGIPSSTPTEEVARSLGIPLVGFEEHAVIDVTIDGADEVDPDLNLIKGGGGALLREKVVAQATKKNIIIVDESKISDKL-GTIFALPVEVVPFA---TASETRFL-ESLGAKVTVRENQLGKAFKTDNHNRILD 181
BLAST of DY262842 vs. ExPASy Swiss-Prot
Match: RPIA_RHOPT (Ribose-5-phosphate isomerase A OS=Rhodopseudomonas palustris (strain TIE-1) GN=rpiA PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 5.862e-40 Identity = 98/223 (43.95%), Postives = 138/223 (61.88%), Query Frame = 1 Query: 295 LTQDELKKIAAYKAVEFVESGMVLGLGTGSTAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRT---TGEQPFVTDNGNYVIDLYLKKDIGDLKVQATTFCGLPVFVKHRMFLDMATTV 954 + ++ELK+ AA +A+E V GM LGLGTGSTAKH V+ +GE +R G I+G+PTS+ T A GI L+ LD +D+ IDGADEVD ++L+KG GG+LLREK+V A + +VI DESKLV LG +P+EV+P+ T + LQ+ F GC +L+ FVTD G++++D L + I D A +P V+H +F+ MA+TV Sbjct: 1 MDKEELKRRAAARALEEVRGGMKLGLGTGSTAKHFVELLGERVRLG--LEIIGVPTSEVTRADAERCGIRLTSLDEIDRLDITIDGADEVDHHLDLIKGGGGALLREKIVAAASDRMIVIADESKLVDTLG--RFPLPIEVIPFGLGATRRALQNAFTAAGCDGELKLRPGKDGHAFVTDGGHWILDAQLGR-IPDAPRLAQLLSVIPGVVEHGLFVGMASTV 218
BLAST of DY262842 vs. ExPASy Swiss-Prot
Match: RPIA_RHOPA (Ribose-5-phosphate isomerase A OS=Rhodopseudomonas palustris GN=rpiA PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 5.862e-40 Identity = 98/223 (43.95%), Postives = 138/223 (61.88%), Query Frame = 1 Query: 295 LTQDELKKIAAYKAVEFVESGMVLGLGTGSTAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRT---TGEQPFVTDNGNYVIDLYLKKDIGDLKVQATTFCGLPVFVKHRMFLDMATTV 954 + ++ELK+ AA +A+E V GM LGLGTGSTAKH V+ +GE +R G I+G+PTS+ T A GI L+ LD +D+ IDGADEVD ++L+KG GG+LLREK+V A + +VI DESKLV LG +P+EV+P+ T + LQ+ F GC +L+ FVTD G++++D L + I D A +P V+H +F+ MA+TV Sbjct: 1 MDKEELKRRAAARALEEVRGGMKLGLGTGSTAKHFVELLGERVRLG--LEIIGVPTSEVTRADAERCGIRLTSLDEIDRLDITIDGADEVDHHLDLIKGGGGALLREKIVAAASDRMIVIADESKLVDTLG--RFPLPIEVIPFGLGATRRALQNAFTAAGCDGELKLRPGKDGHAFVTDGGHWILDAQLGR-IPDAPRLAQLLSVIPGVVEHGLFVGMASTV 218
BLAST of DY262842 vs. ExPASy Swiss-Prot
Match: RPIA_NITWN (Ribose-5-phosphate isomerase A OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=rpiA PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 5.862e-40 Identity = 93/220 (42.27%), Postives = 135/220 (61.36%), Query Frame = 1 Query: 295 LTQDELKKIAAYKAVEFVESGMVLGLGTGSTAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKL---RTTGEQPFVTDNGNYVIDLYLKKDIGDLKVQATTFCGLPVFVKHRMFLDMA 945 +T D LK+ AA +A+E+VE GM LGLGTGSTAKH V+ +GE +R G +VG+PTS+ T A G+PL+ LD +DL +DGADE+DP +NL KG GG+LLREK+V A + +VI DE+K V LG +P+EV+P+ T + + ++F G +L + FVTD G+++ D +L + I D A +P V+H +F+ +A Sbjct: 1 MTMDALKRQAAARALEYVEDGMRLGLGTGSTAKHFVELLGERVRDG--LKVVGVPTSEATRADAERCGVPLTTLDDLDRLDLTVDGADEIDPDLNLTKGGGGALLREKIVAAASDRMIVIADETKWVAGLG--RFPLPIEVIPFGLAATRRAITEVFAKAGVSGELAVRKRPDGHAFVTDGGHWIFDAHLGQ-IPDASYLAGLLNPIPGVVEHGLFIGLA 215
BLAST of DY262842 vs. ExPASy Swiss-Prot
Match: RPIA_RHOP5 (Ribose-5-phosphate isomerase A OS=Rhodopseudomonas palustris (strain BisA53) GN=rpiA PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 1.706e-39 Identity = 94/223 (42.15%), Postives = 138/223 (61.88%), Query Frame = 1 Query: 295 LTQDELKKIAAYKAVEFVESGMVLGLGTGSTAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGEQ---PFVTDNGNYVIDLYLKKDIGDLKVQATTFCGLPVFVKHRMFLDMATTV 954 ++ DELK+ AA A+E V GM LGLGTGSTAKH V+ +G ++ G +VG+PTS+ T A GIPL+ LD +DL +DGADE+DP +NLVKG GG+LLREK+V A + +VI D+SKLV LG +P+EV+P+ T + ++ CG +L+ + FVTD G++++D +L + I D A +P V+H +F+ +A++V Sbjct: 1 MSSDELKRQAAAVALEQVRDGMKLGLGTGSTAKHFVELLGAKVQGG--LQVVGVPTSEVTRADAERCGIPLATLDEVDHLDLTVDGADEIDPALNLVKGGGGALLREKIVAAASGRMIVIADDSKLVETLG--RFPLPIEVIPFGLAATRRAIEQALAVCGIDGELKLRNGKDGHAFVTDGGHWIVDAHLGR-IPDAPRLAGLLSVIPGIVEHGLFIGLASSV 218
BLAST of DY262842 vs. ExPASy Swiss-Prot
Match: RPIA_NITHX (Ribose-5-phosphate isomerase A OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=rpiA PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 1.706e-39 Identity = 93/220 (42.27%), Postives = 136/220 (61.82%), Query Frame = 1 Query: 295 LTQDELKKIAAYKAVEFVESGMVLGLGTGSTAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKL---RTTGEQPFVTDNGNYVIDLYLKKDIGDLKVQATTFCGLPVFVKHRMFLDMA 945 +T D LK+ AA +A+E+VE GM LGLGTGSTAKH V+ +GE +R G +VG+PTS+ T A GIPL+ LD +DL +DGADE+DP +NL+KG GG+LLREK+V A ++ +VI DE+K V LG +P+EV+P+ T + + + F G ++ + FVTD G+++ D +L + I D A +P V+H +F+ +A Sbjct: 1 MTLDALKRQAAARALEYVEDGMRLGLGTGSTAKHFVELLGERVRDG--LKVVGVPTSEATRADAERCGIPLTTLDDLDRLDLTVDGADEIDPDLNLIKGGGGALLREKIVAAASERMIVIADETKWVAGLG--RFPLPIEVIPFGLAATRRAIAEAFTKAGASGQMVVRKGPDGLAFVTDGGHWIFDAHLGQ-IPDASHLAGLLNPIPGVVEHGLFIGLA 215 The following BLAST results are available for this feature:
BLAST of DY262842 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 459
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262842 ID=DY262842; Name=DY262842; organism=Citrus clementina; type=EST; length=1315bpback to top |