DY270350
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY270350 vs. ExPASy Swiss-Prot
Match: RS32_ARATH (40S ribosomal protein S3-2 OS=Arabidopsis thaliana GN=RPS3B PE=1 SV=1) HSP 1 Score: 310.071 bits (793), Expect = 2.833e-92 Identity = 157/168 (93.45%), Postives = 163/168 (97.02%), Query Frame = 3 Query: 18 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYI 521 M TQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF+MESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP EYI Sbjct: 1 MTTQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYI 168 HSP 2 Score: 50.0618 bits (118), Expect = 2.833e-92 Identity = 25/53 (47.17%), Postives = 34/53 (64.15%), Query Frame = 1 Query: 526 SAVRHVLLRQGVLGIQVNILLGWDQKGQARANHTLCLIWVTIHPPEGKSVVVP 684 SAVRHVLLRQGVLGI+V ++L WD KG + L + + P E +++ P Sbjct: 170 SAVRHVLLRQGVLGIKVKVMLDWDPKGISGPKTPLPDVVIIHSPKEEEAIYAP 222
BLAST of DY270350 vs. ExPASy Swiss-Prot
Match: RS31_ARATH (40S ribosomal protein S3-1 OS=Arabidopsis thaliana GN=RPS3A PE=2 SV=1) HSP 1 Score: 311.612 bits (797), Expect = 1.070e-91 Identity = 158/168 (94.05%), Postives = 164/168 (97.62%), Query Frame = 3 Query: 18 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYI 521 MATQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF+MESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP EYI Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYI 168 HSP 2 Score: 46.595 bits (109), Expect = 1.070e-91 Identity = 25/46 (54.35%), Postives = 32/46 (69.57%), Query Frame = 1 Query: 526 SAVRHVLLRQGVLGIQVNILLGWDQKGQARANHTLCLIWVTIHPPE 663 +AVRHVLLRQGVLGI+V I+L WD G++ L + V IH P+ Sbjct: 170 AAVRHVLLRQGVLGIKVKIMLDWDPTGKSGPKTPLPDV-VIIHAPK 214
BLAST of DY270350 vs. ExPASy Swiss-Prot
Match: RS33_ARATH (40S ribosomal protein S3-3 OS=Arabidopsis thaliana GN=RPS3C PE=1 SV=1) HSP 1 Score: 310.071 bits (793), Expect = 1.396e-91 Identity = 157/168 (93.45%), Postives = 164/168 (97.62%), Query Frame = 3 Query: 18 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYI 521 MATQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP++SVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF+MESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP EYI Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSLVQKRFKFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYI 168 HSP 2 Score: 47.7506 bits (112), Expect = 1.396e-91 Identity = 26/52 (50.00%), Postives = 34/52 (65.38%), Query Frame = 1 Query: 526 SAVRHVLLRQGVLGIQVNILLGWDQKGQARANHTLCLIWVTIHPPEGKSVVV 681 +AVRHVLLRQGVLG++V I+L WD KG+ L + V IH P+ V + Sbjct: 170 AAVRHVLLRQGVLGLKVKIMLDWDPKGKQGPMTPLPDV-VIIHTPKEDDVYI 220
BLAST of DY270350 vs. ExPASy Swiss-Prot
Match: RS31_XENLA (40S ribosomal protein S3-A OS=Xenopus laevis GN=rps3-A PE=2 SV=2) HSP 1 Score: 288.5 bits (737), Expect = 9.033e-85 Identity = 149/168 (88.69%), Postives = 153/168 (91.07%), Query Frame = 3 Query: 18 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYI 521 MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+ Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYV 168 HSP 2 Score: 46.595 bits (109), Expect = 9.033e-85 Identity = 27/55 (49.09%), Postives = 33/55 (60.00%), Query Frame = 1 Query: 526 SAVRHVLLRQGVLGIQVNILLGWDQKGQARANHTLCLIWVTIHPPEGKSVVVPTT 690 +AVRHVLLRQGVLGI+V I+L WD G+ L + P K +VPTT Sbjct: 170 TAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEP---KDEIVPTT 221
BLAST of DY270350 vs. ExPASy Swiss-Prot
Match: RS3_RAT (40S ribosomal protein S3 OS=Rattus norvegicus GN=Rps3 PE=2 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 2.005e-84 Identity = 149/168 (88.69%), Postives = 153/168 (91.07%), Query Frame = 3 Query: 18 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYI 521 MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+ Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYV 168 HSP 2 Score: 45.4394 bits (106), Expect = 2.005e-84 Identity = 26/55 (47.27%), Postives = 33/55 (60.00%), Query Frame = 1 Query: 526 SAVRHVLLRQGVLGIQVNILLGWDQKGQARANHTLCLIWVTIHPPEGKSVVVPTT 690 +AVRHVLLRQGVLGI+V I+L WD G+ L + P K ++PTT Sbjct: 170 TAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEP---KDEILPTT 221
BLAST of DY270350 vs. ExPASy Swiss-Prot
Match: RS3_MOUSE (40S ribosomal protein S3 OS=Mus musculus GN=Rps3 PE=1 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 2.005e-84 Identity = 149/168 (88.69%), Postives = 153/168 (91.07%), Query Frame = 3 Query: 18 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYI 521 MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+ Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYV 168 HSP 2 Score: 45.4394 bits (106), Expect = 2.005e-84 Identity = 26/55 (47.27%), Postives = 33/55 (60.00%), Query Frame = 1 Query: 526 SAVRHVLLRQGVLGIQVNILLGWDQKGQARANHTLCLIWVTIHPPEGKSVVVPTT 690 +AVRHVLLRQGVLGI+V I+L WD G+ L + P K ++PTT Sbjct: 170 TAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEP---KDEILPTT 221
BLAST of DY270350 vs. ExPASy Swiss-Prot
Match: RS3_AMBME (40S ribosomal protein S3 OS=Ambystoma mexicanum GN=RPS3 PE=2 SV=1) HSP 1 Score: 287.345 bits (734), Expect = 2.615e-84 Identity = 148/168 (88.10%), Postives = 153/168 (91.07%), Query Frame = 3 Query: 18 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYI 521 MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG+KGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+ Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGSKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYV 168 HSP 2 Score: 46.2098 bits (108), Expect = 2.615e-84 Identity = 26/55 (47.27%), Postives = 33/55 (60.00%), Query Frame = 1 Query: 526 SAVRHVLLRQGVLGIQVNILLGWDQKGQARANHTLCLIWVTIHPPEGKSVVVPTT 690 +AVRHVLLRQGVLGI+V I+L WD G+ L + P K ++PTT Sbjct: 170 TAVRHVLLRQGVLGIKVKIMLAWDPSGKIGPKKPLPDHVSIVEP---KDEILPTT 221
BLAST of DY270350 vs. ExPASy Swiss-Prot
Match: RS3_PIG (40S ribosomal protein S3 OS=Sus scrofa GN=RPS3 PE=2 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 2.615e-84 Identity = 149/168 (88.69%), Postives = 153/168 (91.07%), Query Frame = 3 Query: 18 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYI 521 MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+ Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYV 168 HSP 2 Score: 45.0542 bits (105), Expect = 2.615e-84 Identity = 26/55 (47.27%), Postives = 33/55 (60.00%), Query Frame = 1 Query: 526 SAVRHVLLRQGVLGIQVNILLGWDQKGQARANHTLCLIWVTIHPPEGKSVVVPTT 690 +AVRHVLLRQGVLGI+V I+L WD G+ L + P K ++PTT Sbjct: 170 TAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEP---KDEILPTT 221
BLAST of DY270350 vs. ExPASy Swiss-Prot
Match: RS3_HUMAN (40S ribosomal protein S3 OS=Homo sapiens GN=RPS3 PE=1 SV=2) HSP 1 Score: 288.5 bits (737), Expect = 2.615e-84 Identity = 149/168 (88.69%), Postives = 153/168 (91.07%), Query Frame = 3 Query: 18 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYI 521 MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+ Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYV 168 HSP 2 Score: 45.0542 bits (105), Expect = 2.615e-84 Identity = 26/55 (47.27%), Postives = 33/55 (60.00%), Query Frame = 1 Query: 526 SAVRHVLLRQGVLGIQVNILLGWDQKGQARANHTLCLIWVTIHPPEGKSVVVPTT 690 +AVRHVLLRQGVLGI+V I+L WD G+ L + P K ++PTT Sbjct: 170 TAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEP---KDEILPTT 221
BLAST of DY270350 vs. ExPASy Swiss-Prot
Match: RS3_BOVIN (40S ribosomal protein S3 OS=Bos taurus GN=RPS3 PE=2 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 2.615e-84 Identity = 149/168 (88.69%), Postives = 153/168 (91.07%), Query Frame = 3 Query: 18 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYI 521 MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+ Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYV 168 HSP 2 Score: 45.0542 bits (105), Expect = 2.615e-84 Identity = 26/55 (47.27%), Postives = 33/55 (60.00%), Query Frame = 1 Query: 526 SAVRHVLLRQGVLGIQVNILLGWDQKGQARANHTLCLIWVTIHPPEGKSVVVPTT 690 +AVRHVLLRQGVLGI+V I+L WD G+ L + P K ++PTT Sbjct: 170 TAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEP---KDEILPTT 221 The following BLAST results are available for this feature:
BLAST of DY270350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >DY270350 ID=DY270350; Name=DY270350; organism=Citrus clementina; type=EST; length=1259bpback to top |