DY270354
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY270354 vs. ExPASy Swiss-Prot
Match: RAP1_ARATH (Transcription factor MYC2 OS=Arabidopsis thaliana GN=RAP1 PE=1 SV=2) HSP 1 Score: 192.586 bits (488), Expect = 3.762e-48 Identity = 115/245 (46.94%), Postives = 147/245 (60.00%), Query Frame = 1 Query: 103 MTDYRLPSTMNLWT-DDNGSVMEAFMSS-DLTGIWPPSQSSASTADPMKTHIXXXXXXXXXXXXFFNQETLQQRLQQLIEGSREGWTYAIFWQSSCDYSGSSMLGWGDXXXXXXXXXXXXXXIKT----SSAAEQEHRKKVLRELNSLISGSTSSPXXXXXXXXXXXXXWFFLISMTQSFYVTXXXXXXXLPGQAYFGNSPVGVSGTERLAKSGCDPARQGPVFRVQNLF*YRPPMGLVKLGSPE 819 MTDYRL TMNLWT DDN S+MEAFMSS D++ +WPP+ ++ +TA T FNQETLQQRLQ LIEG+ EGWTYAIFWQ S D+SG+S+LGWGD + S+ A+QE+RKKVLRELNSLISG +P WFFL+SMTQSF L G+A+ + V VSG+++L+ SGC+ A+QG VF + + G+V++GS E Sbjct: 1 MTDYRLQPTMNLWTTDDNASMMEAFMSSSDISTLWPPASTTTTTAT---TETTPTPAMEIPAQAGFNQETLQQRLQALIEGTHEGWTYAIFWQPSYDFSGASVLGWGDGYYKGEEDKANPRRRSSSPPFSTPADQEYRKKVLRELNSLISGGV-APSDDAVDEEVTDTEWFFLVSMTQSF-----ACGAGLAGKAFATGNAVWVSGSDQLSGSGCERAKQGGVFGMHTIACIPSANGVVEVGSTE 236
BLAST of DY270354 vs. ExPASy Swiss-Prot
Match: BH004_ARATH (Transcription factor MYC4 OS=Arabidopsis thaliana GN=BHLH4 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 4.314e-36 Identity = 100/253 (39.53%), Postives = 130/253 (51.38%), Query Frame = 1 Query: 103 MTDYRL----PSTMNLW-TDDNGSVMEAFMS--SDLTGIWPPSQSSASTADPMKTHIXXXXXXXXXXXXFFNQETLQQRLQQLIEGSREGWTYAIFWQSSCDYSGSS-------MLGWGDXXXXXXXXXXXXXXIKTSSAAEQEHRKKVLRELNSLISGSTSSPXXXXXXXXXXXXXWFFLISMTQSFYVTXXXXXXXLPGQAYFGNSPVGVSGTERLAKSGCDPARQGPVFRVQNLF*YRPPMGLVKLGSPE 819 +TDY L T NLW TDD+ SVMEAF+ SD + ++PP P + N++ LQQRLQ LIEG+ E WTYA+FWQSS ++G +LGWGD +SAAEQEHRK+V+RELNSLISG WFFL+SMTQSF LPGQA+ + + +SG+ LA S C+ ARQG ++ +Q + G+V+LGS E Sbjct: 8 VTDYHLNQSKTDTTNLWSTDDDASVMEAFIGGGSDHSSLFPP------LPPPPLPQV--------------NEDNLQQRLQALIEGANENWTYAVFWQSSHGFAGEDNNNNNTVLLGWGDGYYKGEEEKSRKKKSNPASAAEQEHRKRVIRELNSLISGGVGG-GDEAGDEEVTDTEWFFLVSMTQSF-----VKGTGLPGQAFSNSDTIWLSGSNALAGSSCERARQGQIYGLQTMVCVATENGVVELGSSE 234
BLAST of DY270354 vs. ExPASy Swiss-Prot
Match: ATR2_ARATH (Transcription factor ATR2 OS=Arabidopsis thaliana GN=ATR2 PE=1 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 7.376e-28 Identity = 74/181 (40.88%), Postives = 100/181 (55.25%), Query Frame = 1 Query: 292 FNQETLQQRLQQLIEGSREGWTYAIFWQSSCDYSGSS-----MLGWGDXXXXXXXXXXXXXXIKTSSAAEQEHRKKVLRELNSLISGSTSSPXXXXXXXXXXXXXWFFLISMTQSFYVTXXXXXXXLPGQAYFGNSPVGVSGTERLAKSGCDPARQGPVFRVQNLF*YRPPMGLVKLGSPE 819 FN++TLQQRLQ LIE + E WTYAIFWQ S D+ S+ +LGWGD ++ AEQEHRK+V+RELNSLISG WFFL+SMTQSF LPG+++ + + +SG+ L SGC+ A QG ++ ++ + G+V+LGS E Sbjct: 47 FNEDTLQQRLQALIESAGENWTYAIFWQISHDFDSSTGDNTVILGWGDGYYKGEEDKEKKK--NNTNTAEQEHRKRVIRELNSLISGGI-GVSDESNDEEVTDTEWFFLVSMTQSF-----VNGVGLPGESFLNSRVIWLSGSGALTGSGCERAGQGQIYGLKTMVCIATQNGVVELGSSE 219
BLAST of DY270354 vs. ExPASy Swiss-Prot
Match: BH028_ARATH (Transcription factor bHLH28 OS=Arabidopsis thaliana GN=BHLH28 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.068e-18 Identity = 72/236 (30.51%), Postives = 106/236 (44.92%), Query Frame = 1 Query: 142 TDDNGSVMEAFMSSDLTGIWPPSQSSASTADPMKTHIXXXXXXXXXXXXFFNQETLQQRLQQLIEGSREGWTYAIFWQSSC-DYSGSSMLGWGDXXXXXXXXXXXXXXIK-----TSSAAEQEHRKKVLRELNSLISGS----TSSPXXXXXXXXXXXXXWFFLISMTQSFYVTXXXXXXXLPGQAYFGNSPVGVSGTERLAKSGCDPARQGPVFRVQNLF*YRPPMGLVKLGSPE 819 TDDN ++EA ++SD + P+ S T TL +RL ++ G+ E W+YAIFW+ S D+SG ++L WGD ++ SS E+E R V+RELN +ISG WFFL+SMT SF L G+A+ +PV V+G++ + SGCD A+QG +Q + G+++L S E Sbjct: 4 TDDNLLMIEALLTSDPSPPLLPANLSLET-------------------------TLPKRLHAVLNGTHEPWSYAIFWKPSYDDFSGEAVLKWGDGVYTGGNEEKTRGRLRRKKTILSSPEEKERRSNVIRELNLMISGEAFPVVEDDVSDDDDVEVTDMEWFFLVSMTWSF-----GNGSGLAGKAFASYNPVLVTGSDLIYGSGCDRAKQGGDVGLQTILCIPSHNGVLELASTE 209 The following BLAST results are available for this feature:
BLAST of DY270354 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY270354 ID=DY270354; Name=DY270354; organism=Citrus clementina; type=EST; length=1157bpback to top |