DY270413
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY270413 vs. ExPASy Swiss-Prot
Match: YDHE_SCHPO (Pumilio domain-containing protein C6G9.14 OS=Schizosaccharomyces pombe GN=SPAC6G9.14 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 6.100e-29 Identity = 63/147 (42.86%), Postives = 96/147 (65.31%), Query Frame = 3 Query: 6 VQLLIETLKTRQQVSLVKAALKPGFLDLIKDLNGNHVLQRCLQCLSNEDNEFIFYAAAKFCVDIATHQHGCCVLQRCIAHSIGRHRDKLITEISKNGRHLAQDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHLLTQKFSNHVVE 446 +Q +I+ + + Q+S + AL+P + L KDLNGNHV+Q+CL S ED +FIF A + +D++TH+HGCCV+QRC H+ ++L+ I + L QD FGNYV+QY++EL P+ + ++S F L TQKFS++V+E Sbjct: 433 LQKIIDLVSSPDQISCIVNALRPNVVLLTKDLNGNHVIQKCLNKFSQEDCQFIFDAICEDPLDVSTHRHGCCVVQRCFDHASPAQIEQLVEHIVPHALTLVQDAFGNYVLQYVLELNNPNHTEAIISYFLYKVRALSTQKFSSNVME 579
BLAST of DY270413 vs. ExPASy Swiss-Prot
Match: PUF4_YEAST (Pumilio homology domain family member 4 OS=Saccharomyces cerevisiae GN=PUF4 PE=1 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 1.150e-27 Identity = 66/151 (43.71%), Postives = 91/151 (60.26%), Query Frame = 3 Query: 6 VQLLIETLKTRQQVSLVKAALKPGFLDLIKDLNGNHVLQRCLQCLSNEDNEFIFYAAAKFCVDIATHQHGCCVLQRCIAHSIGRHRDKLITEISKNGRHLAQDPFGNYVVQYII----ELKIPSVSANLLSQFKGHYVHLLTQKFSNHVVE 446 +Q LIE +KT ++ +V +L+P + L KDLNGNHV+Q+CLQ L E+ +FIF A + C+DIATH+HGCCVLQRC+ H D L ++ L DPFGNYVVQYII E + ++ K + L KF ++V+E Sbjct: 653 LQKLIECIKTDEEAQIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFGSNVIE 803
BLAST of DY270413 vs. ExPASy Swiss-Prot
Match: YAD3_SCHPO (Pumilio domain-containing protein C4G8.03c OS=Schizosaccharomyces pombe GN=SPAC4G8.03c PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.901e-22 Identity = 59/183 (32.24%), Postives = 103/183 (56.28%), Query Frame = 3 Query: 6 VQLLIETLKTRQQVSLVKAALKPGFLDLIKDLNGNHVLQRCLQCLSNEDNEFIFYAAAKFCVDIATHQHGCCVLQRCIAHSIGRHRDKLITEISKNGRHLAQDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHLLTQKFSNHVVEN-----GPGILEEGDLKLPIELPFSAQLSNSCSNNH 539 +Q +I+ L + +Q+SL+ + P L D NG HVLQ+C+ E E +F + + + +AT++HGCC+LQRC+ + G +++L+ I K+ L Q+ +GNY+VQ+++EL I + ++ +F G+ L QKFS++ +E P E+ L+ + P QL + C N+ Sbjct: 552 MQNIIDKLTSNEQISLLLKIIIPSLTTLACDNNGTHVLQKCIAKFPPEKLEPLFLSMEENLITLATNRHGCCILQRCLDRTNGDIQERLVNSIIKSCLLLVQNAYGNYLVQHVLELNIQPYTERIIEKFFGNICKLSLQKFSSNAIEQCIRTASPSTREQ-MLQEFLSFPNIEQLLDDCYANY 733
BLAST of DY270413 vs. ExPASy Swiss-Prot
Match: PUM2_MOUSE (Pumilio homolog 2 OS=Mus musculus GN=Pum2 PE=1 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 1.967e-19 Identity = 49/149 (32.89%), Postives = 87/149 (58.39%), Query Frame = 3 Query: 3 VVQLLIETLKTRQQV-SLVKAALKPGFLDLIKDLNGNHVLQRCLQCLSNEDNEFIFYAAAKFCVDIATHQHGCCVLQRCIAHSIGRHRDKLITEISKNGRHLAQDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHLLTQKFSNHVVE 446 V+Q +E++ + QQV S + L L +KD NGNHV+Q+C++C+ + +FI A ++TH +GC V+QR + H ++ E+ ++ L QD +GNYV+Q+++E P + ++S+ +G + L KF+++VVE Sbjct: 815 VIQKALESISSDQQVISEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVE 963
BLAST of DY270413 vs. ExPASy Swiss-Prot
Match: PUM2_HUMAN (Pumilio homolog 2 OS=Homo sapiens GN=PUM2 PE=1 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 1.967e-19 Identity = 49/149 (32.89%), Postives = 87/149 (58.39%), Query Frame = 3 Query: 3 VVQLLIETLKTRQQV-SLVKAALKPGFLDLIKDLNGNHVLQRCLQCLSNEDNEFIFYAAAKFCVDIATHQHGCCVLQRCIAHSIGRHRDKLITEISKNGRHLAQDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHLLTQKFSNHVVE 446 V+Q +E++ + QQV S + L L +KD NGNHV+Q+C++C+ + +FI A ++TH +GC V+QR + H ++ E+ ++ L QD +GNYV+Q+++E P + ++S+ +G + L KF+++VVE Sbjct: 815 VIQKALESISSDQQVISEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVE 963
BLAST of DY270413 vs. ExPASy Swiss-Prot
Match: PUM1_PONAB (Pumilio homolog 1 OS=Pongo abelii GN=PUM1 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 5.722e-19 Identity = 47/148 (31.76%), Postives = 88/148 (59.46%), Query Frame = 3 Query: 3 VVQLLIETLKTRQQVSLVKAALKPGFLDLIKDLNGNHVLQRCLQCLSNEDNEFIFYAAAKFCVDIATHQHGCCVLQRCIAHSIGRHRDKLITEISKNGRHLAQDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHLLTQKFSNHVVE 446 V+Q +E + + QQ +V+ L L +KD NGNHV+Q+C++C+ + +FI A ++TH +GC V+QR + H + ++ E+ ++ L QD +GNYV+Q+++E P + ++++ +G+ + L KF+++VVE Sbjct: 937 VIQKALEFIPSDQQNEMVRE-LDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVE 1083
BLAST of DY270413 vs. ExPASy Swiss-Prot
Match: PUM1_HUMAN (Pumilio homolog 1 OS=Homo sapiens GN=PUM1 PE=1 SV=3) HSP 1 Score: 95.9005 bits (237), Expect = 5.722e-19 Identity = 47/148 (31.76%), Postives = 88/148 (59.46%), Query Frame = 3 Query: 3 VVQLLIETLKTRQQVSLVKAALKPGFLDLIKDLNGNHVLQRCLQCLSNEDNEFIFYAAAKFCVDIATHQHGCCVLQRCIAHSIGRHRDKLITEISKNGRHLAQDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHLLTQKFSNHVVE 446 V+Q +E + + QQ +V+ L L +KD NGNHV+Q+C++C+ + +FI A ++TH +GC V+QR + H + ++ E+ ++ L QD +GNYV+Q+++E P + ++++ +G+ + L KF+++VVE Sbjct: 937 VIQKALEFIPSDQQNEMVRE-LDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVE 1083
BLAST of DY270413 vs. ExPASy Swiss-Prot
Match: PUM1_MOUSE (Pumilio homolog 1 OS=Mus musculus GN=Pum1 PE=1 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 2.174e-18 Identity = 47/149 (31.54%), Postives = 88/149 (59.06%), Query Frame = 3 Query: 3 VVQLLIETLKTRQQV-SLVKAALKPGFLDLIKDLNGNHVLQRCLQCLSNEDNEFIFYAAAKFCVDIATHQHGCCVLQRCIAHSIGRHRDKLITEISKNGRHLAQDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHLLTQKFSNHVVE 446 V+Q +E + + QQV + + L L +KD NGNHV+Q+C++C+ + +FI A ++TH +GC V+QR + H + ++ E+ ++ L QD +GNYV+Q+++E P + ++++ +G+ + L KF+++VVE Sbjct: 938 VIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVE 1086
BLAST of DY270413 vs. ExPASy Swiss-Prot
Match: PUM1_CHICK (Pumilio homolog 1 OS=Gallus gallus GN=PUM1 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.174e-18 Identity = 47/149 (31.54%), Postives = 87/149 (58.39%), Query Frame = 3 Query: 3 VVQLLIETLKTRQQV-SLVKAALKPGFLDLIKDLNGNHVLQRCLQCLSNEDNEFIFYAAAKFCVDIATHQHGCCVLQRCIAHSIGRHRDKLITEISKNGRHLAQDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHLLTQKFSNHVVE 446 V+Q +E + QQV + + L L +KD NGNHV+Q+C++C+ + +FI A ++TH +GC V+QR + H + ++ E+ ++ L QD +GNYV+Q+++E P + ++++ +G+ + L KF+++VVE Sbjct: 938 VIQKALEFIPPDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVE 1086
BLAST of DY270413 vs. ExPASy Swiss-Prot
Match: PUM_DROME (Maternal protein pumilio OS=Drosophila melanogaster GN=pum PE=1 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 1.079e-17 Identity = 47/148 (31.76%), Postives = 82/148 (55.41%), Query Frame = 3 Query: 3 VVQLLIETLKTRQQVSLVKAALKPGFLDLIKDLNGNHVLQRCLQCLSNEDNEFIFYAAAKFCVDIATHQHGCCVLQRCIAHSIGRHRDKLITEISKNGRHLAQDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHLLTQKFSNHVVE 446 V+Q +E++ QQ +V L L +KD NGNHV+Q+C++C+ +FI A ++TH +GC V+QR + H ++ E+ ++ L QD +GNYV+Q+++E + L++ +G + L KF+++VVE Sbjct: 1200 VIQKALESISPEQQQEIVHE-LDGHVLKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVE 1346 The following BLAST results are available for this feature:
BLAST of DY270413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY270413 ID=DY270413; Name=DY270413; organism=Citrus clementina; type=EST; length=1320bpback to top |