DY271115
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271115 vs. ExPASy Swiss-Prot
Match: RL24_PRUAV (60S ribosomal protein L24 OS=Prunus avium GN=RPL24 PE=2 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 8.923e-57 Identity = 108/112 (96.43%), Postives = 110/112 (98.21%), Query Frame = 1 Query: 19 MVLKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL 354 MVLKTELC+FSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIA EAVKK+RR TKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL Sbjct: 1 MVLKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL 112 HSP 2 Score: 23.8682 bits (50), Expect = 8.923e-57 Identity = 7/18 (38.89%), Postives = 13/18 (72.22%), Query Frame = 3 Query: 462 GCRPEGPQARRWWWKAVN 515 G +P+GP+ W W+A++ Sbjct: 149 GAQPKGPKLGGWRWQALS 166
BLAST of DY271115 vs. ExPASy Swiss-Prot
Match: RL24_CICAR (60S ribosomal protein L24 OS=Cicer arietinum GN=RPL24 PE=2 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 6.662e-54 Identity = 103/112 (91.96%), Postives = 108/112 (96.43%), Query Frame = 1 Query: 19 MVLKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL 354 MVLKTELC+FSGAKIYPG+GIRFIR DSQVFLF NSKCKRYFHNRLKPSKLTWTAM+RKQHKKD A EAVKK+RRATKKPYSRSIVGATLEVIQK+RTEKPEVRDAAREAAL Sbjct: 1 MVLKTELCRFSGAKIYPGRGIRFIRGDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHKKDAAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAAL 112
BLAST of DY271115 vs. ExPASy Swiss-Prot
Match: RL24_HORVU (60S ribosomal protein L24 OS=Hordeum vulgare GN=RPL24 PE=2 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 5.640e-53 Identity = 102/112 (91.07%), Postives = 106/112 (94.64%), Query Frame = 1 Query: 19 MVLKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL 354 MVLKTELC+FSG KIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKP+KL WTAMYRKQHKKDI AEA KK+RR TKKPYSRSIVGATLEVIQK+R EKPEVRDAAREAAL Sbjct: 1 MVLKTELCRFSGQKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPAKLCWTAMYRKQHKKDIHAEAAKKRRRTTKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAAL 112
BLAST of DY271115 vs. ExPASy Swiss-Prot
Match: RL242_ARATH (60S ribosomal protein L24-2 OS=Arabidopsis thaliana GN=RPL24B PE=2 SV=2) HSP 1 Score: 206.453 bits (524), Expect = 2.799e-52 Identity = 100/112 (89.29%), Postives = 106/112 (94.64%), Query Frame = 1 Query: 19 MVLKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL 354 MVLKTELC+FSG KIYPG+GIRFIRSDSQVFLF NSKCKRYFHN+LKPSKL WTAMYRKQHKKD A EAVK++RRATKKPYSRSIVGATLEVIQK+R EKPEVRDAAREAAL Sbjct: 1 MVLKTELCRFSGQKIYPGRGIRFIRSDSQVFLFLNSKCKRYFHNKLKPSKLAWTAMYRKQHKKDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAAL 112
BLAST of DY271115 vs. ExPASy Swiss-Prot
Match: RL241_ARATH (60S ribosomal protein L24-1 OS=Arabidopsis thaliana GN=RPL24A PE=1 SV=2) HSP 1 Score: 206.068 bits (523), Expect = 3.655e-52 Identity = 100/112 (89.29%), Postives = 106/112 (94.64%), Query Frame = 1 Query: 19 MVLKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL 354 MVLKTELC+FSG KIYPG+GIRFIRSDSQVFLF NSKCKRYFHN+LKPSKL WTAMYRKQHKKD A EAVK++RRATKKPYSRSIVGATLEVIQK+R EKPEVRDAAREAAL Sbjct: 1 MVLKTELCRFSGQKIYPGRGIRFIRSDSQVFLFLNSKCKRYFHNKLKPSKLCWTAMYRKQHKKDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAAL 112
BLAST of DY271115 vs. ExPASy Swiss-Prot
Match: RL24B_SCHPO (60S ribosomal protein L24-B OS=Schizosaccharomyces pombe GN=rpl24b PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 1.710e-25 Identity = 56/110 (50.91%), Postives = 77/110 (70.00%), Query Frame = 1 Query: 25 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL 354 +K E+C FSG+K+YPG G F+R D++VF F N K + F R P +L+WT +YR+ HKK I+ E KK+ R T K + R IVGA L+VI+++R ++PEVR AAR AAL Sbjct: 1 MKVEVCSFSGSKVYPGAGRLFVRGDNKVFRFVNKKSESLFLQRKNPRRLSWTVLYRRMHKKGISEEHAKKRTRRTVK-HQRGIVGANLDVIKEKRNQRPEVRAAARAAAL 109
BLAST of DY271115 vs. ExPASy Swiss-Prot
Match: RL24A_SCHPO (60S ribosomal protein L24-A OS=Schizosaccharomyces pombe GN=rpl24a PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 1.710e-25 Identity = 56/110 (50.91%), Postives = 77/110 (70.00%), Query Frame = 1 Query: 25 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL 354 +K E+C FSG+K+YPG G F+R D++VF F N K + F R P +L+WT +YR+ HKK I+ E KK+ R T K + R IVGA L+VI+++R ++PEVR AAR AAL Sbjct: 1 MKVEVCSFSGSKVYPGAGRLFVRGDNKVFRFVNKKSESLFLQRKNPRRLSWTVLYRRMHKKGISEEHAKKRTRRTVK-HQRGIVGANLDVIKEKRNQRPEVRAAARAAAL 109
BLAST of DY271115 vs. ExPASy Swiss-Prot
Match: RL24_DEBHA (60S ribosomal protein L24 OS=Debaryomyces hansenii GN=RPL24 PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 4.975e-25 Identity = 55/110 (50.00%), Postives = 78/110 (70.91%), Query Frame = 1 Query: 25 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL 354 +K EL FSG KIYPG+G F+R DS++F F +SK FH R P +++WT +YR+QHKK I+ E+ K++ R T K R+IVGA+LE+I++RR++KP R AAR+ L Sbjct: 1 MKVELDSFSGTKIYPGRGTLFVRGDSKIFRFQSSKSASLFHQRKNPRRISWTVLYRRQHKKGISEESAKRRTRKTVK-NQRAIVGASLELIKERRSQKPSDRKAARDVKL 109
BLAST of DY271115 vs. ExPASy Swiss-Prot
Match: RL24_ASHGO (60S ribosomal protein L24 OS=Ashbya gossypii GN=RPL24 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.891e-24 Identity = 54/107 (50.47%), Postives = 74/107 (69.16%), Query Frame = 1 Query: 25 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAARE 345 +K E+ FSGAKIYPG+G F+R DS+VF F +SK FH R P ++ WT +YR+ HKK I E KK+ R T K R++VGA+LE+I++RR+ KPE+R A R+ Sbjct: 1 MKVEIDSFSGAKIYPGRGTLFVRGDSKVFRFHSSKSASLFHQRKNPRRIAWTVLYRRHHKKGITEEVAKKRSRKTVKA-QRAVVGASLELIKERRSLKPEIRKAKRD 106
BLAST of DY271115 vs. ExPASy Swiss-Prot
Match: RL24_CANGA (60S ribosomal protein L24 OS=Candida glabrata GN=RPL24 PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 4.212e-24 Identity = 55/107 (51.40%), Postives = 73/107 (68.22%), Query Frame = 1 Query: 25 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAARE 345 +K E+ FSGAKIYPG+G F+R DS++F F NSK F R P ++ WT +YR+ HKK I E KK+ R T K R+IVGA+LE+I++RR+ KPEVR A R+ Sbjct: 1 MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQNSKSASLFKQRKNPRRVAWTVLYRRHHKKGITEEVAKKRSRKTVKA-QRAIVGASLELIKERRSLKPEVRKAKRD 106 The following BLAST results are available for this feature:
BLAST of DY271115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >DY271115 ID=DY271115; Name=DY271115; organism=Citrus clementina; type=EST; length=1253bpback to top |