EH406239
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RM02_ORYSJ (60S ribosomal protein L2, mitochondrial OS=Oryza sativa subsp. japonica GN=RPL2 PE=2 SV=2) HSP 1 Score: 195.282 bits (495), Expect = 2.764e-49 Identity = 94/126 (74.60%), Postives = 108/126 (85.71%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYK 382 GT +H+IE +PGQG KL RAAGT AKI+KEP S CLVRLPSG EKLID+RCRATIG VSNP+HGA+KLRKAGQSRW GRRP+VRGVAMNPVDHPHGGGEGR+K GR S++PWGKP K+G++ Sbjct: 372 GTWVHDIECHPGQGAKLARAAGTYAKIIKEPASQ-CLVRLPSGVEKLIDSRCRATIGIVSNPNHGARKLRKAGQSRWSGRRPIVRGVAMNPVDHPHGGGEGRTKG----GRPSVSPWGKPTKAGFR 492
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RM02_ORYSI (60S ribosomal protein L2, mitochondrial OS=Oryza sativa subsp. indica GN=RPL2 PE=2 SV=2) HSP 1 Score: 195.282 bits (495), Expect = 2.764e-49 Identity = 94/126 (74.60%), Postives = 108/126 (85.71%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYK 382 GT +H+IE +PGQG KL RAAGT AKI+KEP S CLVRLPSG EKLID+RCRATIG VSNP+HGA+KLRKAGQSRW GRRP+VRGVAMNPVDHPHGGGEGR+K GR S++PWGKP K+G++ Sbjct: 372 GTWVHDIECHPGQGAKLARAAGTYAKIIKEPASQ-CLVRLPSGVEKLIDSRCRATIGIVSNPNHGARKLRKAGQSRWSGRRPIVRGVAMNPVDHPHGGGEGRTKG----GRPSVSPWGKPTKAGFR 492
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RM02_ORYSA (60S ribosomal protein L2, mitochondrial OS=Oryza sativa GN=RPL2 PE=2 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 2.764e-49 Identity = 94/126 (74.60%), Postives = 108/126 (85.71%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYK 382 GT +H+IE +PGQG KL RAAGT AKI+KEP S CLVRLPSG EKLID+RCRATIG VSNP+HGA+KLRKAGQSRW GRRP+VRGVAMNPVDHPHGGGEGR+K GR S++PWGKP K+G++ Sbjct: 372 GTWVHDIECHPGQGAKLARAAGTYAKIIKEPASQ-CLVRLPSGVEKLIDSRCRATIGIVSNPNHGARKLRKAGQSRWSGRRPIVRGVAMNPVDHPHGGGEGRTKG----GRPSVSPWGKPTKAGFR 492
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RM02_MARPO (60S ribosomal protein L2, mitochondrial OS=Marchantia polymorpha GN=RPL2 PE=3 SV=2) HSP 1 Score: 182.185 bits (461), Expect = 2.421e-45 Identity = 89/128 (69.53%), Postives = 103/128 (80.47%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKIL-KEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKT 385 GT +HNIE NPGQG KL RAAGT A+I+ K + C+VRLPSG +KLID+RCRATIG VSN +HG +K KAGQSRWLGRRP+VRGVAMNPVDHPHGGGEGR+K GR S++PWGKP K G+KT Sbjct: 371 GTWVHNIERNPGQGAKLTRAAGTFAQIIQKVENTPQCIVRLPSGVDKLIDSRCRATIGIVSNLNHGKRKFNKAGQSRWLGRRPIVRGVAMNPVDHPHGGGEGRTKG----GRPSVSPWGKPTKGGFKT 494
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RM02_RECAM (60S ribosomal protein L2, mitochondrial OS=Reclinomonas americana GN=RPL2 PE=3 SV=2) HSP 1 Score: 150.984 bits (380), Expect = 5.977e-36 Identity = 72/122 (59.02%), Postives = 95/122 (77.87%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCK 370 GT+IHNIE+NPG+GGK+VR+AG+SA+++ + + FC+++LPSG +L ATIG +SN + K+ KAG+SRW+GRRP+VRGVAMNPVDHPHGGGEG K+SG GR S+TPW P K Sbjct: 138 GTMIHNIELNPGKGGKIVRSAGSSAQLISKDENGFCMLKLPSGEYRLFPNNSLATIGILSNIDNKNIKIGKAGRSRWMGRRPIVRGVAMNPVDHPHGGGEG--KTSG--GRPSVTPWSWPTK 255
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_DICT6 (50S ribosomal protein L2 OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=rplB PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 5.060e-35 Identity = 78/127 (61.42%), Postives = 91/127 (71.65%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKT 385 GT+IHN+E+ PG+GG+LVRAAGT+A+IL + + VRLPSG +L D CRATIG VSN H L KAG+SRWLGRRP VRG AMNPVDHPHGGGEG++ LTPWGKP GYKT Sbjct: 138 GTLIHNLELYPGRGGQLVRAAGTAAQILGKE-GKWAYVRLPSGEIRLFDLNCRATIGQVSNVDHQNVSLGKAGRSRWLGRRPHVRGSAMNPVDHPHGGGEGKAPIG---HPSPLTPWGKP-TLGYKT 259
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_THEPX (50S ribosomal protein L2 OS=Thermoanaerobacter sp. (strain X514) GN=rplB PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.127e-34 Identity = 78/127 (61.42%), Postives = 94/127 (74.02%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKT 385 GTIIHNIE+ PG+GG+LVRAAGT+A+++ + + VR+PSG +LI CRATIG VSN H K+ KAG+SRWLG RP VRG AMNPVDHPHGGGEG++ G+ G LTPWGKP GYKT Sbjct: 138 GTIIHNIELIPGKGGQLVRAAGTAAQLMAKE-GDYVQVRMPSGEIRLIKADCRATIGQVSNLDHENVKIGKAGRSRWLGIRPTVRGSAMNPVDHPHGGGEGKA-PIGHPG--PLTPWGKPA-LGYKT 259
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_THEP3 (50S ribosomal protein L2 OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=rplB PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.127e-34 Identity = 78/127 (61.42%), Postives = 94/127 (74.02%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKT 385 GTIIHNIE+ PG+GG+LVRAAGT+A+++ + + VR+PSG +LI CRATIG VSN H K+ KAG+SRWLG RP VRG AMNPVDHPHGGGEG++ G+ G LTPWGKP GYKT Sbjct: 138 GTIIHNIELIPGKGGQLVRAAGTAAQLMAKE-GDYVQVRMPSGEIRLIKADCRATIGQVSNLDHENVKIGKAGRSRWLGIRPTVRGSAMNPVDHPHGGGEGKA-PIGHPG--PLTPWGKPA-LGYKT 259
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_BACHK (50S ribosomal protein L2 OS=Bacillus thuringiensis subsp. konkukian GN=rplB PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.472e-34 Identity = 75/128 (58.59%), Postives = 95/128 (74.22%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCS-LTPWGKPCKSGYKT 385 GT++HNIE+ PG+GG+LVR+AGTSA++L + + LVRL SG +L+ + CRAT+G V N SH K+ KAG+SRWLG+RP VRG MNPVDHPHGGGEGRS GR S ++PWGKP G+KT Sbjct: 138 GTVVHNIELKPGRGGQLVRSAGTSAQVLGKE-GKYVLVRLTSGEVRLVLSACRATVGQVGNESHELIKIGKAGRSRWLGKRPTVRGSVMNPVDHPHGGGEGRSPI----GRKSPMSPWGKP-TLGFKT 259
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_BACCZ (50S ribosomal protein L2 OS=Bacillus cereus (strain ZK / E33L) GN=rplB PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.472e-34 Identity = 75/128 (58.59%), Postives = 95/128 (74.22%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCS-LTPWGKPCKSGYKT 385 GT++HNIE+ PG+GG+LVR+AGTSA++L + + LVRL SG +L+ + CRAT+G V N SH K+ KAG+SRWLG+RP VRG MNPVDHPHGGGEGRS GR S ++PWGKP G+KT Sbjct: 138 GTVVHNIELKPGRGGQLVRSAGTSAQVLGKE-GKYVLVRLTSGEVRLVLSACRATVGQVGNESHELIKIGKAGRSRWLGKRPTVRGSVMNPVDHPHGGGEGRSPI----GRKSPMSPWGKP-TLGFKT 259 The following BLAST results are available for this feature:
BLAST of EH406239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EH406239 ID=EH406239; Name=EH406239; organism=Citrus clementina; type=EST; length=716bpback to top |