FC868525

Overview
NameFC868525
Unique NameFC868525
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868525 vs. ExPASy Swiss-Prot
Match: S17P_ARATH (Sedoheptulose-1,7-bisphosphatase, chloroplastic OS=Arabidopsis thaliana GN=At3g55800 PE=1 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 4.719e-62
Identity = 121/179 (67.60%), Postives = 135/179 (75.42%), Query Frame = 3
Query:  159 METGITCYSRGVVTPTVSSQRYTXXXXXXXXXXXXXXXXXXXXXXFGESLRVVPRSAVKVSKTKNS--PLVTKCELGDSLEEFLTKATPDKALIRLMMCMGEALRTIAFKVRTASCGGTACVNSFGDEQLAVDMLADKLLFEALTYSHFCKYACSEEVPELQDMGGPAEGGFSXAFDHL 689
            MET I CYSRG++ P+VSSQR +                      FG+SLR+ P+S +K +K K++    VTKCE+G SLEEFL +ATPDK L  L+MCMGEALRTIAFKVRTASCGGTACVNSFGDEQLAVDMLADKLLFEAL YSH CKYACSEEVPELQDMGGP EGGFS AFD L
Sbjct:    1 METSIACYSRGILPPSVSSQRSSTLVSPPSYSTSSSFKRLKSSSIFGDSLRLAPKSQLKATKAKSNGASTVTKCEIGQSLEEFLAQATPDKGLRTLLMCMGEALRTIAFKVRTASCGGTACVNSFGDEQLAVDMLADKLLFEALQYSHVCKYACSEEVPELQDMGGPVEGGFSVAFDPL 179          
BLAST of FC868525 vs. ExPASy Swiss-Prot
Match: S17P_SPIOL (Sedoheptulose-1,7-bisphosphatase, chloroplastic OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 2.342e-61
Identity = 120/177 (67.80%), Postives = 133/177 (75.14%), Query Frame = 3
Query:  159 METGITCYSRGVVTPTVSSQRYTXXXXXXXXXXXXXXXXXXXXXXFGESLRVVPRSAVKVSKTKNSPLVTKCELGDSLEEFLTKATPDKALIRLMMCMGEALRTIAFKVRTASCGGTACVNSFGDEQLAVDMLADKLLFEALTYSHFCKYACSEEVPELQDMGGPAEGGFSXAFDHL 689
            MET + C SR +V P VS Q  +                      FGESLR+  +S+V+V+K KNS LVTKCELGDSLEEFL KAT DK LIRLMMCMGEALRTI FKVRTASCGGT CVN+FGDEQLA+D+LADKLLFEAL YSHFCKYACSEE+PELQDMGGP +GGFS AFD L
Sbjct:    1 METSMACCSRSIVLPRVSPQHSSALVPSSINLKSLKSSSL-----FGESLRMTTKSSVRVNKAKNSSLVTKCELGDSLEEFLAKATTDKGLIRLMMCMGEALRTIGFKVRTASCGGTQCVNTFGDEQLAIDVLADKLLFEALNYSHFCKYACSEELPELQDMGGPVDGGFSVAFDPL 172          
BLAST of FC868525 vs. ExPASy Swiss-Prot
Match: S17P_WHEAT (Sedoheptulose-1,7-bisphosphatase, chloroplastic OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 5.782e-52
Identity = 103/137 (75.18%), Postives = 113/137 (82.48%), Query Frame = 3
Query:  294 FGESLRV-VPRSAVKVSK----TKNSPLVTKCELGDSLEEFLTKATPDKALIRLMMCMGEALRTIAFKVRTASCGGTACVNSFGDEQLAVDMLADKLLFEALTYSHFCKYACSEEVPELQDMGGPAEGGFSXAFDHL 689
            +GESLR    R++    +       + L T+C +GDSLEEFLTKATPDK LIRL++CMGEA+RTIAFKVRTASCGGTACVNSFGDEQLAVDMLADKLLFEAL YSH CKYACSEEVPELQDMGGP EGGFS AFD L
Sbjct:   42 YGESLRANTARTSFPAGRQSKAASRAALTTRCAIGDSLEEFLTKATPDKNLIRLLICMGEAMRTIAFKVRTASCGGTACVNSFGDEQLAVDMLADKLLFEALEYSHVCKYACSEEVPELQDMGGPVEGGFSVAFDPL 178          
BLAST of FC868525 vs. ExPASy Swiss-Prot
Match: S17P_CHLRE (Sedoheptulose-1,7-bisphosphatase, chloroplastic OS=Chlamydomonas reinhardtii GN=CSBP PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.607e-36
Identity = 78/116 (67.24%), Postives = 90/116 (77.59%), Query Frame = 3
Query:  342 KTKNSPLVTKCELGDSLEEFLTKATPDKALIRLMMCMGEALRTIAFKVRTASCGGTACVNSFGDEQLAVDMLADKLLFEALTYSHFCKYACSEEVPELQDMGGPAEGGFSXAFDHL 689
            +++ + ++T+ ++GDSL EFL +ATPD  L  +MM M EA RTIA KVRTASC GTACVNSFGDEQLAVDM+ADKLLFEAL YSH CK ACSEEVPE  DMGG    GF  AFD L
Sbjct:   63 QSRRTAVLTQAKIGDSLAEFLVEATPDPKLRHVMMSMAEATRTIAHKVRTASCAGTACVNSFGDEQLAVDMVADKLLFEALKYSHVCKLACSEEVPEPVDMGGE---GFCVAFDPL 175          
The following BLAST results are available for this feature:
BLAST of FC868525 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
S17P_ARATH4.719e-6267.60Sedoheptulose-1,7-bisphosphatase, chloroplastic OS... [more]
S17P_SPIOL2.342e-6167.80Sedoheptulose-1,7-bisphosphatase, chloroplastic OS... [more]
S17P_WHEAT5.782e-5275.18Sedoheptulose-1,7-bisphosphatase, chloroplastic OS... [more]
S17P_CHLRE2.607e-3667.24Sedoheptulose-1,7-bisphosphatase, chloroplastic OS... [more]
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Properties
Property NameValue
Genbank descriptionC31001E04EF AbioticL1 Citrus clementina cDNA clone C31001E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868525 ID=FC868525; Name=FC868525; organism=Citrus clementina; type=EST; length=703bp
GAATGTTAACTGCTTATCTGCTATCCAAGTTTCCATGACCAAAAAAAATC
AATAACAGAACTGAAATATTGATACTACTACGACTACTAACAACTATAAG
CTTAGCTAGCATTAGCAAGAGTTTCTGAGCAGTGAAGTTTTATCAAAGCT
CTTGGAAAATGGAGACTGGTATCACGTGCTATTCTCGTGGCGTTGTTACT
CCCACTGTTTCTTCTCAGCGTTACACCGCTCTAGCCTCACCAACATCCGT
TTCTTCATCTTTCAGCTCAAGGAGCCTGAAAGCTAGCTCCCTATTTGGGG
AATCACTTAGAGTGGTGCCAAGATCAGCAGTAAAGGTTTCAAAGACAAAA
AACTCTCCTCTTGTGACTAAATGTGAGCTTGGTGATAGCTTGGAAGAATT
TCTGACTAAGGCAACACCAGATAAGGCATTGATTCGGTTGATGATGTGCA
TGGGAGAAGCATTAAGGACTATAGCTTTTAAAGTCAGGACAGCTTCCTGT
GGAGGAACAGCTTGCGTCAATTCTTTTGGAGACGAGCAACTAGCTGTTGA
TATGCTTGCTGACAAGCTTCTTTTTGAGGCCCTGACTTACTCACACTTCT
GCAAATATGCTTGCTCCGAAGAAGTACCTGAACTCCAAGATATGGGAGGC
CCGGCTGAAGGTGGATTTAGTGNTGCGTTTGATCACTTGATGGATCTAGC
ATG
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