FC868564
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868564 vs. ExPASy Swiss-Prot
Match: CD48D_ARATH (Cell division control protein 48 homolog D OS=Arabidopsis thaliana GN=CDC48D PE=1 SV=1) HSP 1 Score: 392.889 bits (1008), Expect = 8.996e-109 Identity = 189/212 (89.15%), Postives = 202/212 (95.28%), Query Frame = 2 Query: 74 MSNQAESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVRSGDENRLDEVGYDDVGG 709 M+NQAESSD+KGTK+DFSTAILE+KKA NRLVVDEAINDDNSVV LHPDTMEKLQ FRGDTILIKGKKRKDTVCIALAD+TC+EPKIRMNKVVRSNLRVRLGDV+SVHQC DVKYG RVHILP+DDTIEGV+GN+FDAYLKPYF EAYRPVRKGDLFLVRGGMRS+EFKVIETDP EYCVVAPDTEIFCEGEP++ DE RLDEVGYDDVGG Sbjct: 1 MANQAESSDSKGTKKDFSTAILEKKKAANRLVVDEAINDDNSVVSLHPDTMEKLQLFRGDTILIKGKKRKDTVCIALADETCDEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGNRVHILPLDDTIEGVSGNIFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSIEFKVIETDPAEYCVVAPDTEIFCEGEPIKREDEERLDEVGYDDVGG 212
BLAST of FC868564 vs. ExPASy Swiss-Prot
Match: CD48E_ARATH (Cell division control protein 48 homolog E OS=Arabidopsis thaliana GN=CDC48E PE=2 SV=2) HSP 1 Score: 391.349 bits (1004), Expect = 2.617e-108 Identity = 193/212 (91.04%), Postives = 201/212 (94.81%), Query Frame = 2 Query: 74 MSNQAESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVRSGDENRLDEVGYDDVGG 709 MSN+ ESSD+K TK+DFSTAILERKK+PNRLVVDEAINDDNSVV LHP TMEKLQ FRGDTILIKGKKRKDTVCIALAD+TCEEPKIRMNKVVRSNLRVRLGDV+SVHQC DVKYGKRVHILPVDDT+EGVTGNLFDAYLKPYF EAYRPVRKGDLFLVRGGMRSVEFKVIETDP EYCVVAPDTEIFCEGEPV+ DE RLDEVGYDDVGG Sbjct: 1 MSNEPESSDSK-TKKDFSTAILERKKSPNRLVVDEAINDDNSVVSLHPTTMEKLQLFRGDTILIKGKKRKDTVCIALADETCEEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGKRVHILPVDDTVEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYCVVAPDTEIFCEGEPVKREDEERLDEVGYDDVGG 211
BLAST of FC868564 vs. ExPASy Swiss-Prot
Match: CD48A_ARATH (Cell division control protein 48 homolog A OS=Arabidopsis thaliana GN=CDC48A PE=1 SV=1) HSP 1 Score: 386.726 bits (992), Expect = 6.447e-107 Identity = 191/212 (90.09%), Postives = 200/212 (94.34%), Query Frame = 2 Query: 74 MSNQAESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVRSGDENRLDEVGYDDVGG 709 MS AESSD+K +K+DFSTAILERKK+PNRLVVDEAINDDNSVV LHP TMEKLQ FRGDTILIKGKKRKDTVCIALAD+TCEEPKIRMNKVVRSNLRVRLGDV+SVHQC DVKYGKRVHILPVDDT+EGVTGNLFDAYLKPYF EAYRPVRKGDLFLVRGGMRSVEFKVIETDP EYCVVAPDTEIFCEGEPV+ DE RLD+VGYDDVGG Sbjct: 1 MSTPAESSDSK-SKKDFSTAILERKKSPNRLVVDEAINDDNSVVSLHPATMEKLQLFRGDTILIKGKKRKDTVCIALADETCEEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGKRVHILPVDDTVEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYCVVAPDTEIFCEGEPVKREDEERLDDVGYDDVGG 211
BLAST of FC868564 vs. ExPASy Swiss-Prot
Match: CDC48_SOYBN (Cell division cycle protein 48 homolog OS=Glycine max GN=CDC48 PE=2 SV=1) HSP 1 Score: 386.341 bits (991), Expect = 8.420e-107 Identity = 186/212 (87.74%), Postives = 197/212 (92.92%), Query Frame = 2 Query: 74 MSNQAESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVRSGDENRLDEVGYDDVGG 709 MS Q ESSD K K+DFSTAILERKK+PNRLVVDEA+NDDNSVV +HP TMEKLQ FRGDTILIKGKKRKDT+CIALAD+ CEEPKIRMNKVVRSNLRVRLGDVVSVHQC DVKYGKRVHILP+DDTIEGVTGNLFDA+LKPYF EAYRPVRKGDLFLVRGGMRSVEFKV+ETDP EYCVVAPDTEIFCEGEP++ DE RLDEVGYDDVGG Sbjct: 1 MSQQGESSDPKSGKKDFSTAILERKKSPNRLVVDEAVNDDNSVVTMHPQTMEKLQLFRGDTILIKGKKRKDTICIALADENCEEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVHILPIDDTIEGVTGNLFDAFLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVVETDPGEYCVVAPDTEIFCEGEPLKREDEERLDEVGYDDVGG 212
BLAST of FC868564 vs. ExPASy Swiss-Prot
Match: CDC48_CAPAN (Cell division cycle protein 48 homolog OS=Capsicum annuum GN=CAFP PE=2 SV=1) HSP 1 Score: 378.637 bits (971), Expect = 1.756e-104 Identity = 185/212 (87.26%), Postives = 198/212 (93.40%), Query Frame = 2 Query: 74 MSNQAESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVRSGDENRLDEVGYDDVGG 709 M++QAESSD+K K+DFSTAILERKKA NRLVVDEA+NDDNSVV LHP TMEKLQ FRGDTILIKGKKRKDTV IALAD+TC+EPKIRMNKVVRSNLRVRLGDVVSVHQC DVKYGKRVHILP+DDTIEG+TG+LFDA+LKPYF EAYRP+RKGD FLVRGGMRSVEFKVIETDP EYCVVAPDTEIFCEGEPV+ DE RLDEVGYDDVGG Sbjct: 1 MTDQAESSDSKNAKKDFSTAILERKKAANRLVVDEAVNDDNSVVALHPATMEKLQLFRGDTILIKGKKRKDTVVIALADETCDEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVHILPIDDTIEGLTGDLFDAFLKPYFLEAYRPLRKGDNFLVRGGMRSVEFKVIETDPGEYCVVAPDTEIFCEGEPVKREDEERLDEVGYDDVGG 212
BLAST of FC868564 vs. ExPASy Swiss-Prot
Match: TERA_RAT (Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus GN=Vcp PE=1 SV=3) HSP 1 Score: 311.612 bits (797), Expect = 2.636e-84 Identity = 144/209 (68.90%), Postives = 177/209 (84.69%), Query Frame = 2 Query: 86 AESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPV-RSGDENRLDEVGYDDVGG 709 A +D+KG D STAIL++K PNRL+VDEAIN+DNSVV L M++LQ FRGDT+L+KGKKR++ VCI L+DDTC + KIRMN+VVR+NLRVRLGDV+S+ C DVKYGKR+H+LP+DDT+EG+TGNLF+ YLKPYF EAYRP+RKGD+FLVRGGMR+VEFKV+ETDP YC+VAPDT I CEGEP+ R +E L+EVGYDD+GG Sbjct: 2 ASGADSKGD--DLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGG 208
BLAST of FC868564 vs. ExPASy Swiss-Prot
Match: TERA_MOUSE (Transitional endoplasmic reticulum ATPase OS=Mus musculus GN=Vcp PE=1 SV=4) HSP 1 Score: 311.612 bits (797), Expect = 2.636e-84 Identity = 144/209 (68.90%), Postives = 177/209 (84.69%), Query Frame = 2 Query: 86 AESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPV-RSGDENRLDEVGYDDVGG 709 A +D+KG D STAIL++K PNRL+VDEAIN+DNSVV L M++LQ FRGDT+L+KGKKR++ VCI L+DDTC + KIRMN+VVR+NLRVRLGDV+S+ C DVKYGKR+H+LP+DDT+EG+TGNLF+ YLKPYF EAYRP+RKGD+FLVRGGMR+VEFKV+ETDP YC+VAPDT I CEGEP+ R +E L+EVGYDD+GG Sbjct: 2 ASGADSKGD--DLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGG 208
BLAST of FC868564 vs. ExPASy Swiss-Prot
Match: TERA_HUMAN (Transitional endoplasmic reticulum ATPase OS=Homo sapiens GN=VCP PE=1 SV=4) HSP 1 Score: 311.612 bits (797), Expect = 2.636e-84 Identity = 144/209 (68.90%), Postives = 177/209 (84.69%), Query Frame = 2 Query: 86 AESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPV-RSGDENRLDEVGYDDVGG 709 A +D+KG D STAIL++K PNRL+VDEAIN+DNSVV L M++LQ FRGDT+L+KGKKR++ VCI L+DDTC + KIRMN+VVR+NLRVRLGDV+S+ C DVKYGKR+H+LP+DDT+EG+TGNLF+ YLKPYF EAYRP+RKGD+FLVRGGMR+VEFKV+ETDP YC+VAPDT I CEGEP+ R +E L+EVGYDD+GG Sbjct: 2 ASGADSKGD--DLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGG 208
BLAST of FC868564 vs. ExPASy Swiss-Prot
Match: TERA_PIG (Transitional endoplasmic reticulum ATPase OS=Sus scrofa GN=VCP PE=1 SV=5) HSP 1 Score: 309.686 bits (792), Expect = 1.002e-83 Identity = 143/209 (68.42%), Postives = 176/209 (84.21%), Query Frame = 2 Query: 86 AESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPV-RSGDENRLDEVGYDDVGG 709 A +D+KG D STAIL++K PNRL+VDEAIN+DNSVV L M++LQ FRGDT+L+KGKKR++ VCI L+DDTC + KIRMN+VVR+NLRV LGDV+S+ C DVKYGKR+H+LP+DDT+EG+TGNLF+ YLKPYF EAYRP+RKGD+FLVRGGMR+VEFKV+ETDP YC+VAPDT I CEGEP+ R +E L+EVGYDD+GG Sbjct: 2 ASGADSKGD--DLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVHLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGG 208
BLAST of FC868564 vs. ExPASy Swiss-Prot
Match: TERA_BOVIN (Transitional endoplasmic reticulum ATPase OS=Bos taurus GN=VCP PE=1 SV=1) HSP 1 Score: 309.686 bits (792), Expect = 1.002e-83 Identity = 143/209 (68.42%), Postives = 176/209 (84.21%), Query Frame = 2 Query: 86 AESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPV-RSGDENRLDEVGYDDVGG 709 A +D+KG D STAIL++K PNRL+VDEAIN+DNSVV L M++LQ FRGDT+L+KGKKR++ VCI L+DDTC + KIRMN+VVR+NLRV LGDV+S+ C DVKYGKR+H+LP+DDT+EG+TGNLF+ YLKPYF EAYRP+RKGD+FLVRGGMR+VEFKV+ETDP YC+VAPDT I CEGEP+ R +E L+EVGYDD+GG Sbjct: 2 ASGADSKGD--DLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVHLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGG 208 The following BLAST results are available for this feature:
BLAST of FC868564 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868564 ID=FC868564; Name=FC868564; organism=Citrus clementina; type=EST; length=710bpback to top |