FC868753
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868753 vs. ExPASy Swiss-Prot
Match: CUL3_DICDI (Cullin-3 OS=Dictyostelium discoideum GN=culC PE=3 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 2.193e-52 Identity = 103/217 (47.47%), Postives = 147/217 (67.74%), Query Frame = 2 Query: 83 HRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYSGLVTTMTFHLTEICKSIEAAQGGLFLEELNRKWADHNKALQMIRDILMYMDRTFIPSTHKTPVHELGLNLWRDVVIHSSKIQTRLQDTLLELVQRERSGEVINRGLMRNITKMLMDLG---SFVYQDDFEKHFLEVSADFYRLESQEFIESCDCGDYLKKLK 724 H V+ DP + ++TWK+L+ A+ +I+ NAS LSFEELYRN YNMVL K G+ LY+ L + HL + K++ + FL ELN W +H ++ MIRDILMYMDR ++ + + V +LGL L+RD V H S I+ RL +TLL +VQ+ER GEVI+R L++NI +ML+DLG VY +DFEK L ++ Y+ +SQ I++C C DY+KK++ Sbjct: 17 HGVLADPDFPKRTWKLLKTAMRQIHQQNASNLSFEELYRNGYNMVLQKHGDLLYNNLKKMVDKHLKAVAKTVSESIDEKFLLELNSSWINHKTSMLMIRDILMYMDRNYVKQNNLSSVFDLGLYLFRDNVAHCSTIKDRLLNTLLSMVQKEREGEVIDRILIKNIVQMLIDLGVNSKNVYIEDFEKPLLLKTSSHYQAQSQTLIQTCSCPDYMKKVE 233
BLAST of FC868753 vs. ExPASy Swiss-Prot
Match: CUL3_XENTR (Cullin-3 OS=Xenopus tropicalis GN=cul3 PE=2 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 7.055e-51 Identity = 106/229 (46.29%), Postives = 150/229 (65.50%), Query Frame = 2 Query: 50 KKRTFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYSGLVTTMTFHL-TEICKSIEAAQGGLFLEELNRKWADHNKALQMIRDILMYMDRTFIPSTHKTPVHELGLNLWRDVVIHSSKIQTRLQDTLLELVQRERSGEVINRGLMRNITKMLMDL---GSFVYQDDFEKHFLEVSADFYRLESQEFIESCDCGDYLKKLK 724 K +I AF + +D KY W +L++AI EI N SGLSFEELYRNAY MVLHK GEKLY+GL +T HL ++ + + + FL+ LN+ W DH A+ MIRDILMYMDR ++ + V+ LGL ++RD V+ I+ L+ TLL+++ RER GEV++RG +RN +MLM L G VY++DFE FLE+SA+F+++ESQ+F+ Y+KK++ Sbjct: 12 KDTKMRIRAFP--MTMDEKYVNSIWDLLKNAIQEIQRKNNSGLSFEELYRNAYTMVLHKHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVE 238
BLAST of FC868753 vs. ExPASy Swiss-Prot
Match: CUL3_MOUSE (Cullin-3 OS=Mus musculus GN=Cul3 PE=1 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 7.055e-51 Identity = 106/229 (46.29%), Postives = 150/229 (65.50%), Query Frame = 2 Query: 50 KKRTFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYSGLVTTMTFHL-TEICKSIEAAQGGLFLEELNRKWADHNKALQMIRDILMYMDRTFIPSTHKTPVHELGLNLWRDVVIHSSKIQTRLQDTLLELVQRERSGEVINRGLMRNITKMLMDL---GSFVYQDDFEKHFLEVSADFYRLESQEFIESCDCGDYLKKLK 724 K +I AF + +D KY W +L++AI EI N SGLSFEELYRNAY MVLHK GEKLY+GL +T HL ++ + + + FL+ LN+ W DH A+ MIRDILMYMDR ++ + V+ LGL ++RD V+ I+ L+ TLL+++ RER GEV++RG +RN +MLM L G VY++DFE FLE+SA+F+++ESQ+F+ Y+KK++ Sbjct: 12 KDTKMRIRAFP--MTMDEKYVNSIWDLLKNAIQEIQRKNNSGLSFEELYRNAYTMVLHKHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVE 238
BLAST of FC868753 vs. ExPASy Swiss-Prot
Match: CUL3_HUMAN (Cullin-3 OS=Homo sapiens GN=CUL3 PE=1 SV=2) HSP 1 Score: 200.675 bits (509), Expect = 7.055e-51 Identity = 106/229 (46.29%), Postives = 150/229 (65.50%), Query Frame = 2 Query: 50 KKRTFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYSGLVTTMTFHL-TEICKSIEAAQGGLFLEELNRKWADHNKALQMIRDILMYMDRTFIPSTHKTPVHELGLNLWRDVVIHSSKIQTRLQDTLLELVQRERSGEVINRGLMRNITKMLMDL---GSFVYQDDFEKHFLEVSADFYRLESQEFIESCDCGDYLKKLK 724 K +I AF + +D KY W +L++AI EI N SGLSFEELYRNAY MVLHK GEKLY+GL +T HL ++ + + + FL+ LN+ W DH A+ MIRDILMYMDR ++ + V+ LGL ++RD V+ I+ L+ TLL+++ RER GEV++RG +RN +MLM L G VY++DFE FLE+SA+F+++ESQ+F+ Y+KK++ Sbjct: 12 KDTKMRIRAFP--MTMDEKYVNSIWDLLKNAIQEIQRKNNSGLSFEELYRNAYTMVLHKHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVE 238
BLAST of FC868753 vs. ExPASy Swiss-Prot
Match: CUL3B_XENLA (Cullin-3-B OS=Xenopus laevis GN=cul3b PE=1 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 7.055e-51 Identity = 106/229 (46.29%), Postives = 150/229 (65.50%), Query Frame = 2 Query: 50 KKRTFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYSGLVTTMTFHL-TEICKSIEAAQGGLFLEELNRKWADHNKALQMIRDILMYMDRTFIPSTHKTPVHELGLNLWRDVVIHSSKIQTRLQDTLLELVQRERSGEVINRGLMRNITKMLMDL---GSFVYQDDFEKHFLEVSADFYRLESQEFIESCDCGDYLKKLK 724 K +I AF + +D KY W +L++AI EI N SGLSFEELYRNAY MVLHK GEKLY+GL +T HL ++ + + + FL+ LN+ W DH A+ MIRDILMYMDR ++ + V+ LGL ++RD V+ I+ L+ TLL+++ RER GEV++RG +RN +MLM L G VY++DFE FLE+SA+F+++ESQ+F+ Y+KK++ Sbjct: 12 KDTKMRIRAFP--MTMDEKYVNSIWDLLKNAIQEIQRKNNSGLSFEELYRNAYTMVLHKHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVE 238
BLAST of FC868753 vs. ExPASy Swiss-Prot
Match: CUL3A_XENLA (Cullin-3-A OS=Xenopus laevis GN=cul3a PE=1 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 7.055e-51 Identity = 106/229 (46.29%), Postives = 150/229 (65.50%), Query Frame = 2 Query: 50 KKRTFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYSGLVTTMTFHL-TEICKSIEAAQGGLFLEELNRKWADHNKALQMIRDILMYMDRTFIPSTHKTPVHELGLNLWRDVVIHSSKIQTRLQDTLLELVQRERSGEVINRGLMRNITKMLMDL---GSFVYQDDFEKHFLEVSADFYRLESQEFIESCDCGDYLKKLK 724 K +I AF + +D KY W +L++AI EI N SGLSFEELYRNAY MVLHK GEKLY+GL +T HL ++ + + + FL+ LN+ W DH A+ MIRDILMYMDR ++ + V+ LGL ++RD V+ I+ L+ TLL+++ RER GEV++RG +RN +MLM L G VY++DFE FLE+SA+F+++ESQ+F+ Y+KK++ Sbjct: 12 KDTKMRIRAFP--MTMDEKYVNSIWDLLKNAIQEIQRKNNSGLSFEELYRNAYTMVLHKHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVE 238
BLAST of FC868753 vs. ExPASy Swiss-Prot
Match: CUL3_CAEEL (Cullin-3 OS=Caenorhabditis elegans GN=cul-3 PE=1 SV=2) HSP 1 Score: 171.4 bits (433), Expect = 4.584e-42 Identity = 88/195 (45.13%), Postives = 127/195 (65.13%), Query Frame = 2 Query: 95 VDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYSGLVTTMTFHLTEI-CKSIEAAQGGLFLEELNRKWADHNKALQMIRDILMYMDRTFI-PSTHKTPVHELGLNLWRDVVIHSSKIQTRLQDTLLELVQRERSGEVINRGLMRNITKMLMDLG---SFVYQDDFEKHFLEVSADFYR 664 +D +Y +TW++L+ AI EI N SGLSFEELYRNAY MVLHK GE+LY+GL + H+ + + IE+ G FLE + WADH A+ MIRDILMYMDR ++ + H PV+ LGL+ +R ++ + I R++D LLEL++ +R IN ++N ML+ LG VY+D+FE+ L+ ++D+YR Sbjct: 22 IDEQYVTQTWELLKRAIQEIQRKNNSGLSFEELYRNAYTMVLHKHGERLYNGLKDVIQDHMASVRIRIIESMNSGSFLETVAESWADHTVAMVMIRDILMYMDRIYVAQNNHVLPVYNLGLDAYRTEILRQNGIGDRIRDALLELIKLDRKSNQINWHGIKNACDMLISLGIDSRTVYEDEFERPLLKETSDYYR 216
BLAST of FC868753 vs. ExPASy Swiss-Prot
Match: CUL4B_HUMAN (Cullin-4B OS=Homo sapiens GN=CUL4B PE=1 SV=3) HSP 1 Score: 128.257 bits (321), Expect = 4.450e-29 Identity = 70/218 (32.11%), Postives = 121/218 (55.50%), Query Frame = 2 Query: 68 IEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYSGLVTTMTFHLTEICKSI--EAAQGGLFLEELNRKWADHNKALQMIRDILMYMDRTFIPSTHKTP-VHELGLNLWRDVVIHSSKIQTRLQDTLLELVQRERSGEVINRGLMRNITKMLMDLGSFVYQDDFEKHFLEVSADFYRLESQEFIESCDCGDYL 712 I+ FK + + Y ++TW+ L+ A+ I N + + EELY+ N+ +K LY L H+ ++ LFL++++R W +H + + MIR I +++DRT++ P + ++GL L+R +I K+Q + D +L L++RER+GE I+R L+R++ ML DL +YQD FE+ FLE + Y E Q+ ++ + +YL Sbjct: 181 IKNFKDKPKLPENYTDETWQKLKEAVEAIQNSTSIKYNLEELYQAVENLCSYKISANLYKQLRQICEDHIKAQIHQFREDSLDSVLFLKKIDRCWQNHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRAHIISDQKVQNKTIDGILLLIERERNGEAIDRSLLRSLLSMLSDLQ--IYQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYL 396
BLAST of FC868753 vs. ExPASy Swiss-Prot
Match: CUL3_SCHPO (Cullin-3 OS=Schizosaccharomyces pombe GN=cul3 PE=1 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 4.920e-28 Identity = 83/236 (35.17%), Postives = 120/236 (50.85%), Query Frame = 2 Query: 122 WKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYSGLVTTMTFHL-------------------------------TEICKSIEAAQGGLFLEELNRKWADHNKALQMIRDILMYMDRTFIPSTHKTPVHELGLNLWRDVV-IHSSKIQTRLQDTLLELVQRERSGEVINRGLMRNITKMLMDLGS-----FVYQDDFEKHFLEVSADFYRLESQEFIESCDCGDYLKK 718 W++L+ AI +I+ + S LSFEELYRNAY +VLHK+GEKLY+ + + L T +S+EAA FL L W DH ++QMI +L Y+D+ + S K PV+E G+ ++R+VV ++S +I + +T+L LV ER G INR L+ + ML L S +Y F FL + +FY +ES I +YLKK Sbjct: 26 WEVLQRAIGDIFQKSTSQLSFEELYRNAYILVLHKYGEKLYNHVQDVIRSRLKEETVPAIYKNYDASLLGNALLDIRKNDSYSTSWSRSLEAAH--RFLSSLVNSWKDHIVSMQMISSVLKYLDKVYSKSADKVPVNENGIYIFREVVLLNSFEIGEKCVETILILVYLERKGNTINRPLINDCLDMLNSLPSENKKETLYDVLFAPKFLSYTRNFYEIESSTVIGVFGVVEYLKK 259
BLAST of FC868753 vs. ExPASy Swiss-Prot
Match: CUL4A_MOUSE (Cullin-4A OS=Mus musculus GN=Cul4a PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.442e-27 Identity = 71/222 (31.98%), Postives = 117/222 (52.70%), Query Frame = 2 Query: 56 RTFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYSGLVTTMTFHLTEICKSI--EAAQGGLFLEELNRKWADHNKALQMIRDILMYMDRTFIPSTHKTP-VHELGLNLWRDVVIHSSKIQTRLQDTLLELVQRERSGEVINRGLMRNITKMLMDLGSFVYQDDFEKHFLEVSADFYRLESQEFIESCDCGDYL 712 R I+ F+ R + Y + TW+ L A+ I + + + EELY+ N+ HK LY L H+ ++ LFL+++N W DH + + MIR I +++DRT++ P + ++GL L+R+ +I +Q++ D +L L+ RERSGE ++R L+R++ ML DL VY+D FE FLE + Y E Q ++ + +YL Sbjct: 41 RKLVIKNFRDRPRLPDNYTQDTWRKLHEAVKAIQSSTSIRYNLEELYQAVENLCSHKVSPTLYKQLRQVCEDHVQAQILPFREDSLDSVLFLKKINTCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRNHIISDRMVQSKTIDGILLLIGRERSGEAVDRSLLRSLLSMLSDLQ--VYKDSFELKFLEETNCLYAAEGQRLMQDREVPEYL 260 The following BLAST results are available for this feature:
BLAST of FC868753 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868753 ID=FC868753; Name=FC868753; organism=Citrus clementina; type=EST; length=742bpback to top |