FC868765
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868765 vs. ExPASy Swiss-Prot
Match: AGO2_ORYSJ (Protein argonaute 2 OS=Oryza sativa subsp. japonica GN=AGO2 PE=2 SV=2) HSP 1 Score: 204.527 bits (519), Expect = 4.739e-52 Identity = 117/242 (48.35%), Postives = 151/242 (62.40%), Query Frame = 3 Query: 9 PVLSEPASMRLFSNVGGLQELLEDVTSRAYKIGKGHLQILICVMSRKDDGYKYLKWISETKVGVVTQCCLSTNANKGKGQDQYXXXXXXXXXXXXGGSNAELI-DRLPYFKGEDHVMFVGADVNHPGASNKTSPSIAAVVATVNWPAANRYVARVRPQDHRTEKILNFAGMCLEVVKSYVQLNKVRPQEIIVFRDGVSEGQFDMVLNEELVPLKMAFRSMDYHPRITLIVAQKRHQTRLFPR 731 P + + M + S+ L E L A K LQ+L C MS + GYK LK I ET++G+ TQC LS ANK +GQDQY GGSN +L + LP G + MF+GADVNHP N SPSIAAVVA+V+ A++YV R+R Q HR E I + MC E++ + + N+V+PQ II FRDGVS+GQFDMVLNEEL ++ A ++ DY P IT+IVA+KRH TRLFP+ Sbjct: 651 PCIVQLLDMEVLSDPHQLFEELNKAKQAAAS-KKQKLQLLFCPMSDQHPGYKTLKLICETQLGIQTQCFLSFLANKQQGQDQYMSNLALKINGKIGGSNIQLFGESLPRISGAPY-MFIGADVNHPSPGNVESPSIAAVVASVD-QGASKYVPRIRAQPHRCEVIQHLGDMCKELIGVFEKRNRVKPQRIIYFRDGVSDGQFDMVLNEELADMEKAIKTKDYSPTITVIVAKKRHHTRLFPK 889
BLAST of FC868765 vs. ExPASy Swiss-Prot
Match: AGO3_ORYSJ (Protein argonaute 3 OS=Oryza sativa subsp. japonica GN=AGO3 PE=2 SV=2) HSP 1 Score: 182.956 bits (463), Expect = 1.477e-45 Identity = 112/245 (45.71%), Postives = 149/245 (60.82%), Query Frame = 3 Query: 9 PVLSEPASMRLFSNVGGLQELLEDVTSRAYKIGKGHLQILICVMSRKDDGYKYLKWISETKVGVVTQCCLSTNANKG-KGQDQYXXXXXXXXXXXXGGSNAELI-DRLPYFKGEDHVMFVGADVNHPGASN--KTSPSIAAVVATVNWPAANRYVARVRPQDHRTEKILNFAGMCLEVVKSYVQLNKVRPQEIIVFRDGVSEGQFDMVLNEELVPLKMAFRSMDYHPRITLIVAQKRHQTRLFPR 731 P ++M + S+ L++ L + A + K LQ+L C M + GYK LK + ET++G+ TQC LST A K QDQY GGSN +L D +P +D MF+GADVNHP N K PSIAAVVA+V+ A++YV R+R Q HR E I N +C E++ +Y ++NK +P II FRDGVS+GQFDMVLNEEL ++ DY P+IT+IVA+KRH TRLFP+ Sbjct: 683 PCYEHVSNMEVLSDPKSLRDALIEAKRAAEEEDK-KLQLLFCPMLNRCHGYKTLKLMCETELGIQTQCFLSTAAKLDEKRQDQYITNLALKINGKIGGSNMQLDPDSIPVVSAKDF-MFIGADVNHPPPGNVSKDIPSIAAVVASVD-KGASKYVTRIRAQYHRCEMIQNLGDICKELIGAYEKVNKKKPDSIIYFRDGVSDGQFDMVLNEELADMENKIMVGDY-PKITVIVAKKRHHTRLFPK 923
BLAST of FC868765 vs. ExPASy Swiss-Prot
Match: AGO7_ORYSJ (Protein argonaute 7 OS=Oryza sativa subsp. japonica GN=AGO7 PE=2 SV=2) HSP 1 Score: 173.326 bits (438), Expect = 1.170e-42 Identity = 104/239 (43.51%), Postives = 139/239 (58.16%), Query Frame = 3 Query: 33 MRLFSNVGGLQELLEDVTSRAYKIGKGHLQILICVMSRKDDGYKYLKWISETKVGVVTQCCLSTNANKGKGQDQYXXXXXXXXXXXXGGSNAELIDRLP-----YFKGEDHVMFVGADVNHPGASNKTSPSIAAVVATVNWPAANRYVARVRPQDHRTEKILNFAGMCLEVVKSYVQLNKVRPQEIIVFRDGVSEGQFDMVLNEELVPLK-MAFRSMDYHPRITLIVAQKRHQTRLFPR 731 ++L +NVG L+ L+ + A G+LQ+LICVM R+ GY LK I+ET +GVVTQCCL +N +K Q + GG N L P F E+ VMF+GADV HP + +SPS+ AVVA++NWP+AN+Y++R+R Q HR E I M E+++ +++ P II FRDGVSE QF VL EE+ ++ R Y P IT IV QKRH TRLF R Sbjct: 683 IQLLNNVGILEGKLKKIQEAA----SGNLQLLICVMERRHQGYADLKRIAETSIGVVTQCCLYSNLSKLTSQ--FLTNLALKINAKLGGCNIALYSSFPCQIPRIFLSEEPVMFMGADVTHPHPLDDSSPSVVAVVASMNWPSANKYISRMRSQTHRKEIIEQLDVMAGELLEEFLKEVGKLPSRIIFFRDGVSETQFYKVLKEEMHAVRTTCSRYPGYKPLITFIVVQKRHHTRLFHR 915
BLAST of FC868765 vs. ExPASy Swiss-Prot
Match: AGO12_ORYSJ (Protein argonaute 12 OS=Oryza sativa subsp. japonica GN=AGO12 PE=2 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 8.404e-33 Identity = 86/223 (38.57%), Postives = 115/223 (51.57%), Query Frame = 3 Query: 117 LQILICVMSRKDDGYKYLKWISETKVGVVTQCCLSTNANKGKGQDQYXXXXXXXXXXXXGGSNAELID----RLPYFKGEDHVMFVGADVNHPGASNKTSPSIAAVVATVNWPAANRYVARVRPQDHRTEKILNF-------------AGMCLEVVKSYVQLNKVRPQEIIVFRDGVSEGQFDMVLNEELVPLKMAFRSMD--YHPRITLIVAQKRHQTRLFP 728 LQ+LI +++ Y +K I ET+VGV+TQCC + KG QY GG N L D ++P ++F GADV HP SPSIAAVVA+++WP +Y V Q HR E I N GM E+++S+ Q +P II +RDG+SEGQF VL E+ ++ A S+ Y P +T +V QKRH TRLFP Sbjct: 692 LQLLIVILTEISGSYGRIKRICETEVGVITQCCAPKSLQKGG--KQYLENLALKMNVKVGGRNTVLEDALHKKIPILTDRPTIVF-GADVTHPSPGEDASPSIAAVVASMDWPEVTKYKCLVSTQSHREEIISNLYTEVKDPLKGIIRGGMIRELLRSFYQETGQKPSRIIFYRDGISEGQFSQVLLYEMDAIRKACASLQEGYLPPVTFVVVQKRHHTRLFP 911
BLAST of FC868765 vs. ExPASy Swiss-Prot
Match: MEL1_ORYSJ (Protein argonaute MEL1 OS=Oryza sativa subsp. japonica GN=MEL1 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.612e-31 Identity = 88/252 (34.92%), Postives = 132/252 (52.38%), Query Frame = 3 Query: 45 SNVGGLQELLEDVTSRAYKI----GKGHLQILICVMSRKDDGYKYLKWISETKVGVVTQCCLSTNANKGKGQDQYXXXXXXXXXXXXGGSN-----AELIDRLPYFKGEDHVMFVGADVNHPGASNKTSPSIAAVVATVNWPAANRYVARVRPQDHRTE-------------KILNFAGMCLEVVKSYVQLNKVRPQEIIVFRDGVSEGQFDMVLNEELVPLKMAFRSMD--YHPRITLIVAQKRHQTRLFP 728 +N ++ L DV R ++ GKG LQ+LI ++ Y +K + ET +G+V+QCCL +A++ QY GG N A + + +P+ ++F GADV HP ++ SIAAVVA+++WP +Y V Q HR E K++N GM E++ ++ + RP+ II +RDGVSEGQF VL E+ ++ A S++ Y P +T +V QKRH TRLFP Sbjct: 666 TNPNNIENALRDVHRRTSELLAREGKGGLQLLIVILPEVSGSYGKIKRVCETDLGIVSQCCLPRHASRPN--KQYLENVALKINVKVGGRNTVLERAFIRNGIPFVSEVPTIIF-GADVTHPPPGEDSASSIAAVVASMDWPEITKYRGLVSAQPHRQEIIEDLFSVGKDPVKVVN-GGMIRELLIAFRKKTGRRPERIIFYRDGVSEGQFSHVLLHEMDAIRKACASLEEGYLPPVTFVVVQKRHHTRLFP 913
BLAST of FC868765 vs. ExPASy Swiss-Prot
Match: AGOL_ARATH (Argonaute-like protein At2g27880 OS=Arabidopsis thaliana GN=At2g27880 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.989e-30 Identity = 87/242 (35.95%), Postives = 121/242 (50.00%), Query Frame = 3 Query: 60 LQELLEDVTSRAYKIGKGHLQILICVMSRKDDGYKYLKWISETKVGVVTQCCLSTNANKGKGQDQYXXXXXXXXXXXXGGSNAELID----RLPYFKGEDHVMFVGADVNHPGASNKTSPSIAAVVATVNWPAANRYVARVRPQDHRTEKILNFAGMCLEVVKSYVQLNKVR-------------PQEIIVFRDGVSEGQFDMVLNEELVPLKMAFRSM--DYHPRITLIVAQKRHQTRLFP 728 ++E L D+ RA LQ+LI ++ Y +K I ET++G+V+QCC NK QY GG N L D +P ++ +GADV HP +SPSIAAVVA+++WP N+Y V Q HR E I + + + + V +R PQ II +RDGVSEGQF VL E+ ++ A S+ +Y PR+T ++ QKRH TRLFP Sbjct: 622 IEEALLDIHKRA-----PGLQLLIVILPDVTGSYGKIKRICETELGIVSQCCQPRQVNKLN--KQYMENVALKINVKTGGRNTVLNDAIRRNIPLITDRPTII-MGADVTHPQPGEDSSPSIAAVVASMDWPEINKYRGLVSAQAHREEIIQDLYKLVQDPQRGLVHSGLIREHFIAFRRATGQIPQRIIFYRDGVSEGQFSQVLLHEMTAIRKACNSLQENYVPRVTFVIVQKRHHTRLFP 855
BLAST of FC868765 vs. ExPASy Swiss-Prot
Match: AGO1A_ORYSJ (Protein argonaute 1A OS=Oryza sativa subsp. japonica GN=AGO1A PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.989e-30 Identity = 87/225 (38.67%), Postives = 116/225 (51.56%), Query Frame = 3 Query: 111 GHLQILICVMSRKDDG-YKYLKWISETKVGVVTQCCLSTNANKGKGQDQYXXXXXXXXXXXXGGSNAELID----RLPYFKGEDHVMFVGADVNHPGASNKTSPSIAAVVATVNWPAANRYVARVRPQDHRTEKILNF-------------AGMCLEVVKSYVQLNKVRPQEIIVFRDGVSEGQFDMVLNEELVPLKMAFRSM--DYHPRITLIVAQKRHQTRLF 725 G L +LI ++ + Y LK I ET +G+V+QCCL+ + K QY GG N L+D R+P ++F GADV HP +SPSIAAVVA+ +WP +Y V Q HR E I + GM E++ S+ + +PQ II +RDGVSEGQF VL EL ++ A S+ DY P +T +V QKRH TRLF Sbjct: 705 GELDLLIAILPDNNGSLYGDLKRICETDLGLVSQCCLTKHVFKMS--KQYLANVALKINVKVGGRNTVLVDALTRRIPLVSDRPTIIF-GADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVSAQAHRQELIQDLFKVWKDPQRGTVSGGMIRELLISFKRATGQKPQRIIFYRDGVSEGQFYQVLFYELDAIRKACASLEADYQPPVTFVVVQKRHHTRLF 926
BLAST of FC868765 vs. ExPASy Swiss-Prot
Match: AGO18_ORYSJ (Protein argonaute 18 OS=Oryza sativa subsp. japonica GN=AGO18 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.659e-30 Identity = 77/211 (36.49%), Postives = 124/211 (58.77%), Query Frame = 3 Query: 117 LQILICVMSRKDDG---YKYLKWISETKVGVVTQCCLSTNANKGKGQDQYXXXXXXXXXXXXGGSNAELID---RLPYFKGEDHVMFVGADVNHPGASNKTSPSIAAVVATVNWPAANRYVARVRPQDHRTEKILNFAGMCLEVVKSYVQLNKVRPQEIIVFRDGVSEGQFDMVLNEELVPLKMAFRSM-DYHPRITLIVAQKRHQTRLFP 728 + +L+ VM+ + Y +K I ET++GV++QCC + K + QY GG N+ ++ LP ++F GADV HPG+ ++++PSIA+VVA+ +WP +Y + VR Q R E I + + E++ ++ + +K+ P+++I +RDGVSEGQF V+ E+ ++ A++S+ PRIT IV QKRH TRLFP Sbjct: 745 IDLLLVVMTDDKNNASLYGDVKRICETEIGVLSQCCRAKQVYKERNV-QYCANVALKINAKAGGRNSVFLNVEASLPVVSKSPTIIF-GADVTHPGSFDESTPSIASVVASADWPEVTKYNSVVRMQASRKEIIQDLDSIVRELLNAFKRDSKMEPKQLIFYRDGVSEGQFQQVVESEIPEIEKAWKSLYAGKPRITFIVVQKRHHTRLFP 953
BLAST of FC868765 vs. ExPASy Swiss-Prot
Match: AGO1B_ORYSJ (Protein argonaute 1B OS=Oryza sativa subsp. japonica GN=AGO1B PE=2 SV=3) HSP 1 Score: 127.872 bits (320), Expect = 5.637e-29 Identity = 85/223 (38.12%), Postives = 115/223 (51.57%), Query Frame = 3 Query: 117 LQILICVMSRKDDG-YKYLKWISETKVGVVTQCCLSTNANKGKGQDQYXXXXXXXXXXXXGGSNAELID----RLPYFKGEDHVMFVGADVNHPGASNKTSPSIAAVVATVNWPAANRYVARVRPQDHRTEKILNF-------------AGMCLEVVKSYVQLNKVRPQEIIVFRDGVSEGQFDMVLNEELVPLKMAFRSMD--YHPRITLIVAQKRHQTRLF 725 L +LI ++ + Y LK I ET +G+V+QCCL+ + K QY GG N L+D R+P ++F GADV HP +SPSIAAVVA+ +WP +Y V Q HR E I + GM E++ S+ + +PQ II +RDGVSEGQF VL EL ++ A S++ Y P +T +V QKRH TRLF Sbjct: 744 LDLLIVILPDNNGSLYGDLKRICETDLGLVSQCCLTKHVFKMS--KQYLANVALKINVKVGGRNTVLVDALTRRIPLVSDRPTIIF-GADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVSAQAHRQELIQDLFKVWQDPHRGTVTGGMIKELLISFKRATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLF 963
BLAST of FC868765 vs. ExPASy Swiss-Prot
Match: AGO11_ORYSJ (Protein argonaute 11 OS=Oryza sativa subsp. japonica GN=AGO11 PE=2 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 1.256e-28 Identity = 81/210 (38.57%), Postives = 111/210 (52.86%), Query Frame = 3 Query: 159 YKYLKWISETKVGVVTQCCLSTNANKGKGQDQYXXXXXXXXXXXXGGSNAELID----RLPYFKGEDHVMFVGADVNHPGASNKTSPSIAAVVATVNWPAANRYVARVRPQDHRTEKI-------------LNFAGMCLEVVKSYVQLN-KVRPQEIIVFRDGVSEGQFDMVLNEELVPLKMAFRSMD--YHPRITLIVAQKRHQTRLFP 728 Y +K + ET++GV+TQCCL+ N GG N L D R+P ++F GADV HP A +SPSIAAVVA+++WP ++Y V Q HR E I L + GM E+++S+ + N +P II +RDGVSEGQF VL E+ ++ A S++ Y P +T +V QKRH TRLFP Sbjct: 555 YGRIKRLCETELGVITQCCLARNVQN------------------VGGRNTVLEDALHRRIPLLTDMPTMIF-GADVTHPPAGEDSSPSIAAVVASMDWPEVSKYKCSVSSQSHREEIIADLFTEVKDSQNRLVYGGMIRELIESFRKANGSYKPGRIIFYRDGVSEGQFSQVLLSEMDAIRKACASIEEGYLPPVTFVVVQKRHHTRLFP 745 The following BLAST results are available for this feature:
BLAST of FC868765 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868765 ID=FC868765; Name=FC868765; organism=Citrus clementina; type=EST; length=732bpback to top |