FC868767
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868767 vs. ExPASy Swiss-Prot
Match: SF3B4_RAT (Splicing factor 3B subunit 4 OS=Rattus norvegicus GN=Sf3b4 PE=2 SV=1) HSP 1 Score: 290.426 bits (742), Expect = 5.797e-85 Identity = 138/173 (79.77%), Postives = 156/173 (90.17%), Query Frame = 3 Query: 174 QAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRP 692 QAGPVVN ++PKDRVT HQGYGFVEF SEEDADYAIK++NMIKLYGKPIRVNKAS K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI+ PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGERHG+ AER+LAA NP SQ RP Sbjct: 35 QAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLSQADRP 207 HSP 2 Score: 45.8246 bits (107), Expect = 5.797e-85 Identity = 20/27 (74.07%), Postives = 23/27 (85.19%), Query Frame = 2 Query: 92 AERNQDATAYVGNLDPQVTEELLWELF 172 +ERNQDAT YVG LD +V+E LLWELF Sbjct: 7 SERNQDATVYVGGLDEKVSEPLLWELF 33
BLAST of FC868767 vs. ExPASy Swiss-Prot
Match: SF3B4_MOUSE (Splicing factor 3B subunit 4 OS=Mus musculus GN=Sf3b4 PE=2 SV=1) HSP 1 Score: 290.426 bits (742), Expect = 5.797e-85 Identity = 138/173 (79.77%), Postives = 156/173 (90.17%), Query Frame = 3 Query: 174 QAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRP 692 QAGPVVN ++PKDRVT HQGYGFVEF SEEDADYAIK++NMIKLYGKPIRVNKAS K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI+ PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGERHG+ AER+LAA NP SQ RP Sbjct: 35 QAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLSQADRP 207 HSP 2 Score: 45.8246 bits (107), Expect = 5.797e-85 Identity = 20/27 (74.07%), Postives = 23/27 (85.19%), Query Frame = 2 Query: 92 AERNQDATAYVGNLDPQVTEELLWELF 172 +ERNQDAT YVG LD +V+E LLWELF Sbjct: 7 SERNQDATVYVGGLDEKVSEPLLWELF 33
BLAST of FC868767 vs. ExPASy Swiss-Prot
Match: SF3B4_HUMAN (Splicing factor 3B subunit 4 OS=Homo sapiens GN=SF3B4 PE=1 SV=1) HSP 1 Score: 290.426 bits (742), Expect = 5.797e-85 Identity = 138/173 (79.77%), Postives = 156/173 (90.17%), Query Frame = 3 Query: 174 QAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRP 692 QAGPVVN ++PKDRVT HQGYGFVEF SEEDADYAIK++NMIKLYGKPIRVNKAS K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI+ PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGERHG+ AER+LAA NP SQ RP Sbjct: 35 QAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLSQADRP 207 HSP 2 Score: 45.8246 bits (107), Expect = 5.797e-85 Identity = 20/27 (74.07%), Postives = 23/27 (85.19%), Query Frame = 2 Query: 92 AERNQDATAYVGNLDPQVTEELLWELF 172 +ERNQDAT YVG LD +V+E LLWELF Sbjct: 7 SERNQDATVYVGGLDEKVSEPLLWELF 33
BLAST of FC868767 vs. ExPASy Swiss-Prot
Match: SF3B4_CAEEL (Splicing factor 3B subunit 4 OS=Caenorhabditis elegans GN=sap-49 PE=1 SV=2) HSP 1 Score: 271.552 bits (693), Expect = 2.861e-78 Identity = 130/173 (75.14%), Postives = 152/173 (87.86%), Query Frame = 3 Query: 174 QAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRP 692 QAGPVV+V +PKDRVT HQG+GFVEF EEDADYAIK+LNMIKLYGKPI+VNKAS +K++DVGAN+F+GNLDP+VDEKLLYDTFSAFGVI+ PKIMRD D+G S+GF FI++ SFEASD A+EAMNGQ+LCNR ITVSYA+K+D+KGERHGT AER+LAA NP K RP Sbjct: 35 QAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILNMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYAFKRDSKGERHGTAAERMLAAQNPLFPKDRP 207 HSP 2 Score: 42.3578 bits (98), Expect = 2.861e-78 Identity = 18/25 (72.00%), Postives = 21/25 (84.00%), Query Frame = 2 Query: 95 ERNQDATAYVGNLDPQVTEELLWEL 169 ERNQDAT YVG LD +V+E +LWEL Sbjct: 8 ERNQDATIYVGGLDEKVSESILWEL 32
BLAST of FC868767 vs. ExPASy Swiss-Prot
Match: SAP49_SCHPO (Spliceosome-associated protein 49 OS=Schizosaccharomyces pombe GN=sap49 PE=2 SV=2) HSP 1 Score: 220.32 bits (560), Expect = 6.784e-62 Identity = 105/169 (62.13%), Postives = 136/169 (80.47%), Query Frame = 3 Query: 159 FGSCFQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAA 662 F C QAGPVVN+++P+DRV N H G+GF EF E+D +YA ++LN +KL+GKPIRVN+ASQD+ + +GANLF+GNLDP VDE++LYDTFSA G +V P++ RD + G S+G+GF+SYDSFE +DAAIEAMN Q+L N+ ITVSYA+K++ KGERHG AER LAA Sbjct: 28 FELCLQAGPVVNIHIPRDRVRNSHNGFGFCEFLHEQDVEYACQILNQVKLFGKPIRVNRASQDRGVNTLIGANLFVGNLDPLVDERVLYDTFSALGQLVKAPQVARD-ENGRSKGYGFVSYDSFETADAAIEAMNNQFLMNKPITVSYAFKREGKGERHGDIAERKLAA 195 HSP 2 Score: 38.891 bits (89), Expect = 6.784e-62 Identity = 16/25 (64.00%), Postives = 22/25 (88.00%), Query Frame = 2 Query: 95 ERNQDATAYVGNLDPQVTEELLWEL 169 +RNQDAT Y+GNLD +VT+ +L+EL Sbjct: 6 DRNQDATIYLGNLDEKVTDSILFEL 30
BLAST of FC868767 vs. ExPASy Swiss-Prot
Match: SF3B4_DICDI (Splicing factor 3B subunit 4 OS=Dictyostelium discoideum GN=sf3b4 PE=3 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 5.538e-55 Identity = 97/164 (59.15%), Postives = 132/164 (80.49%), Query Frame = 3 Query: 174 QAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAAN 665 QA PVV V++PKD++T H G +VEF+S DA+YA+KV+ ++L+ K I++ K ++DK +D+GANLFIGNLD DVDE++L+DTFS FG I+ PK+MRD + G S+GF FI++DSFEASDAAIEAMN Q+LCN+ I+V+YA KKD+ ERHG+ AERI+AA+ Sbjct: 35 QAAPVVKVFIPKDKLTQQHSGRAYVEFQSSSDAEYALKVMKFVRLFNKEIKIKKENKDK--VDIGANLFIGNLDADVDERILHDTFSRFGTIIFTPKVMRD-ENGVSKGFAFINFDSFEASDAAIEAMNSQFLCNKPISVTYARKKDS-NERHGSSAERIIAAS 194 HSP 2 Score: 33.113 bits (74), Expect = 5.538e-55 Identity = 15/26 (57.69%), Postives = 18/26 (69.23%), Query Frame = 2 Query: 95 ERNQDATAYVGNLDPQVTEELLWELF 172 ERN +A + +LDP VTE LL ELF Sbjct: 8 ERNHEACLLIRDLDPMVTESLLMELF 33
BLAST of FC868767 vs. ExPASy Swiss-Prot
Match: PABP1_RAT (Polyadenylate-binding protein 1 OS=Rattus norvegicus GN=Pabpc1 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.161e-24 Identity = 56/152 (36.84%), Postives = 92/152 (60.53%), Query Frame = 3 Query: 177 AGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGE 626 AGP++++ V +D +T GY +V F+ DA+ A+ +N + GKP+R+ + +D G N+FI NLD +D K LYDTFSAFG I++ + D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E Sbjct: 34 AGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVC---DENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182 HSP 2 Score: 28.4906 bits (62), Expect = 1.161e-24 Identity = 12/21 (57.14%), Postives = 16/21 (76.19%), Query Frame = 2 Query: 110 ATAYVGNLDPQVTEELLWELF 172 A+ YVG+L P VTE +L+E F Sbjct: 11 ASLYVGDLHPDVTEAMLYEKF 31 HSP 3 Score: 85.1149 bits (209), Expect = 3.947e-16 Identity = 57/175 (32.57%), Postives = 91/175 (52.00%), Query Frame = 3 Query: 147 LRSYFGSCFQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKAS-----------------QDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 620 L+ FG + GP ++V V D + +G+GFV F EDA A+ +N +L GK I V +A QD+ + G NL++ NLD +D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A +K+ + Sbjct: 207 LKELFG---KFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTI-TSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEER 374 HSP 4 Score: 80.4925 bits (197), Expect = 9.722e-15 Identity = 48/137 (35.04%), Postives = 83/137 (60.58%), Query Frame = 3 Query: 222 NLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 611 N +GYGFV F ++E A+ AI+ +N + L + + V + S+ ++ ++GA N++I N D+D++ L + F FG ++ K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK Sbjct: 135 NGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALS-VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
BLAST of FC868767 vs. ExPASy Swiss-Prot
Match: PABP1_HUMAN (Polyadenylate-binding protein 1 OS=Homo sapiens GN=PABPC1 PE=1 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 1.161e-24 Identity = 56/152 (36.84%), Postives = 92/152 (60.53%), Query Frame = 3 Query: 177 AGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGE 626 AGP++++ V +D +T GY +V F+ DA+ A+ +N + GKP+R+ + +D G N+FI NLD +D K LYDTFSAFG I++ + D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E Sbjct: 34 AGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVC---DENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182 HSP 2 Score: 28.4906 bits (62), Expect = 1.161e-24 Identity = 12/21 (57.14%), Postives = 16/21 (76.19%), Query Frame = 2 Query: 110 ATAYVGNLDPQVTEELLWELF 172 A+ YVG+L P VTE +L+E F Sbjct: 11 ASLYVGDLHPDVTEAMLYEKF 31 HSP 3 Score: 85.1149 bits (209), Expect = 3.947e-16 Identity = 57/175 (32.57%), Postives = 91/175 (52.00%), Query Frame = 3 Query: 147 LRSYFGSCFQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKAS-----------------QDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 620 L+ FG + GP ++V V D + +G+GFV F EDA A+ +N +L GK I V +A QD+ + G NL++ NLD +D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A +K+ + Sbjct: 207 LKDLFG---KFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTI-TSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEER 374 HSP 4 Score: 82.0333 bits (201), Expect = 3.341e-15 Identity = 49/137 (35.77%), Postives = 83/137 (60.58%), Query Frame = 3 Query: 222 NLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 611 N +GYGFV F ++E A+ AI+ +N + L + + V + S+ ++ ++GA N++I N D+D++ L D F FG ++ K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK Sbjct: 135 NGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALS-VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
BLAST of FC868767 vs. ExPASy Swiss-Prot
Match: PABP1_BOVIN (Polyadenylate-binding protein 1 OS=Bos taurus GN=PABPC1 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.161e-24 Identity = 56/152 (36.84%), Postives = 92/152 (60.53%), Query Frame = 3 Query: 177 AGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGE 626 AGP++++ V +D +T GY +V F+ DA+ A+ +N + GKP+R+ + +D G N+FI NLD +D K LYDTFSAFG I++ + D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E Sbjct: 34 AGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVC---DENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182 HSP 2 Score: 28.4906 bits (62), Expect = 1.161e-24 Identity = 12/21 (57.14%), Postives = 16/21 (76.19%), Query Frame = 2 Query: 110 ATAYVGNLDPQVTEELLWELF 172 A+ YVG+L P VTE +L+E F Sbjct: 11 ASLYVGDLHPDVTEAMLYEKF 31 HSP 3 Score: 85.1149 bits (209), Expect = 3.947e-16 Identity = 57/175 (32.57%), Postives = 91/175 (52.00%), Query Frame = 3 Query: 147 LRSYFGSCFQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKAS-----------------QDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 620 L+ FG + GP ++V V D + +G+GFV F EDA A+ +N +L GK I V +A QD+ + G NL++ NLD +D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A +K+ + Sbjct: 207 LKDLFG---KFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTI-TSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEER 374 HSP 4 Score: 82.0333 bits (201), Expect = 3.341e-15 Identity = 49/137 (35.77%), Postives = 83/137 (60.58%), Query Frame = 3 Query: 222 NLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 611 N +GYGFV F ++E A+ AI+ +N + L + + V + S+ ++ ++GA N++I N D+D++ L D F FG ++ K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK Sbjct: 135 NGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALS-VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
BLAST of FC868767 vs. ExPASy Swiss-Prot
Match: PABP1_MOUSE (Polyadenylate-binding protein 1 OS=Mus musculus GN=Pabpc1 PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.511e-24 Identity = 56/152 (36.84%), Postives = 92/152 (60.53%), Query Frame = 3 Query: 177 AGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGE 626 AGP++++ V +D +T GY +V F+ DA+ A+ +N + GKP+R+ + +D G N+FI NLD +D K LYDTFSAFG I++ + D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E Sbjct: 34 AGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVC---DENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSQKEREAE 182 HSP 2 Score: 28.4906 bits (62), Expect = 1.511e-24 Identity = 12/21 (57.14%), Postives = 16/21 (76.19%), Query Frame = 2 Query: 110 ATAYVGNLDPQVTEELLWELF 172 A+ YVG+L P VTE +L+E F Sbjct: 11 ASLYVGDLHPDVTEAMLYEKF 31 HSP 3 Score: 85.1149 bits (209), Expect = 3.947e-16 Identity = 57/175 (32.57%), Postives = 91/175 (52.00%), Query Frame = 3 Query: 147 LRSYFGSCFQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKAS-----------------QDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 620 L+ FG + GP ++V V D + +G+GFV F EDA A+ +N +L GK I V +A QD+ + G NL++ NLD +D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A +K+ + Sbjct: 207 LKELFG---KFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTI-TSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEER 374 HSP 4 Score: 82.0333 bits (201), Expect = 3.341e-15 Identity = 49/137 (35.77%), Postives = 83/137 (60.58%), Query Frame = 3 Query: 222 NLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 611 N +GYGFV F ++E A+ AI+ +N + L + + V + SQ ++ ++GA N++I N D+D++ L + F FG ++ K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK Sbjct: 135 NGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSQKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALS-VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269 The following BLAST results are available for this feature:
BLAST of FC868767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 126
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868767 ID=FC868767; Name=FC868767; organism=Citrus clementina; type=EST; length=704bpback to top |