FC868853
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868853 vs. ExPASy Swiss-Prot
Match: PP341_ARATH (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.199e-22 Identity = 31/54 (57.41%), Postives = 38/54 (70.37%), Query Frame = -1 Query: 108 PEAVIQVTKNVRVCNDYHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 269 P I++ KN+RVC D H+ + IS I R I+VRDANRFHHF+ G CSC DYW Sbjct: 739 PGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792 HSP 2 Score: 54.299 bits (129), Expect = 1.199e-22 Identity = 25/57 (43.86%), Postives = 38/57 (66.67%), Query Frame = -3 Query: 268 KEVYKKVESMSVEIKMAGCMPDLSCALHDVEVEDRELMMYYPSENLDVVFGIMNLIP 438 KE+Y+K+E + +++ AG P+ ALHDVE E+RELM+ SE L + FG++ P Sbjct: 683 KEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEP 739
BLAST of FC868853 vs. ExPASy Swiss-Prot
Match: PP347_ARATH (Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana GN=PCMP-H53 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.554e-22 Identity = 30/54 (55.56%), Postives = 41/54 (75.93%), Query Frame = -1 Query: 108 PEAVIQVTKNVRVCNDYHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 269 P I+V KN+RVC D H+A ++I+ +Y R+I++RDANRFH F+ G CSC DYW Sbjct: 937 PSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990 HSP 2 Score: 49.6766 bits (117), Expect = 1.554e-22 Identity = 23/55 (41.82%), Postives = 35/55 (63.64%), Query Frame = -3 Query: 268 VYKKVESMSVEIKMAGCMPDLSCALHDVEVEDRELMMYYPSENLDVVFGIMNLIP 432 +Y+KV+ M +IK G +P+ L DVE E++E +YY SE L V FG+++ P Sbjct: 883 IYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPP 937
BLAST of FC868853 vs. ExPASy Swiss-Prot
Match: PP316_ARATH (Pentatricopeptide repeat-containing protein At4g16835, mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 5.833e-22 Identity = 32/50 (64.00%), Postives = 39/50 (78.00%), Query Frame = -1 Query: 108 IQVTKNVRVCNDYHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 257 IQV KN+R+C D H A +FIS I +R+IIVRD RFHHF+ G+CSC DYW Sbjct: 612 IQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 661 HSP 2 Score: 47.7506 bits (112), Expect = 5.833e-22 Identity = 21/53 (39.62%), Postives = 36/53 (67.92%), Query Frame = -3 Query: 274 VYKKVESMSVEIKMAGCMPDLSCALHDVEVEDRELMMYYPSENLDVVFGIMNL 432 ++KK++ + ++K+AG P+L ALH+VE E +E ++ + SE L V FG + L Sbjct: 554 IHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKL 606
BLAST of FC868853 vs. ExPASy Swiss-Prot
Match: PP285_ARATH (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 7.549e-22 Identity = 34/55 (61.82%), Postives = 41/55 (74.55%), Query Frame = -1 Query: 108 SPEAVIQVTKNVRVCNDYHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 272 SP +I+V KN+RVCND H A +FIS I R+II+RD RFH F+ GTCSC DYW Sbjct: 836 SPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890 HSP 2 Score: 45.8246 bits (107), Expect = 7.549e-22 Identity = 19/51 (37.25%), Postives = 34/51 (66.67%), Query Frame = -3 Query: 268 VESMSVEIKMAGCMPDLSCALHDVEVEDRELMMYYPSENLDVVFGIMNLIP 420 +E++ ++ G +PD SC LH+VE +++E+++ SE L + FGI+N P Sbjct: 787 LETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSP 837
BLAST of FC868853 vs. ExPASy Swiss-Prot
Match: PP419_ARATH (Pentatricopeptide repeat-containing protein At5g46460, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H49 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 4.779e-21 Identity = 27/52 (51.92%), Postives = 37/52 (71.15%), Query Frame = -1 Query: 108 AVIQVTKNVRVCNDYHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 263 + + V KN+RVC D H+ + IS + R+I++RD RFHHF+ GTCSC DYW Sbjct: 646 SAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697 HSP 2 Score: 52.7582 bits (125), Expect = 4.779e-21 Identity = 23/54 (42.59%), Postives = 36/54 (66.67%), Query Frame = -3 Query: 271 VYKKVESMSVEIKMAGCMPDLSCALHDVEVEDRELMMYYPSENLDVVFGIMNLI 432 +Y+K+E + ++K G PD ALHDVE E +E M++Y SE L + FG++N + Sbjct: 590 IYEKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTV 643
BLAST of FC868853 vs. ExPASy Swiss-Prot
Match: PPR53_ARATH (Pentatricopeptide repeat-containing protein At1g20230 OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.776e-20 Identity = 27/50 (54.00%), Postives = 36/50 (72.00%), Query Frame = -1 Query: 108 IQVTKNVRVCNDYHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 257 +QV KN+R+C D H+ +FIS R+I +RD NRFHHF+ G CSC D+W Sbjct: 711 LQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760 HSP 2 Score: 49.6766 bits (117), Expect = 1.776e-20 Identity = 22/53 (41.51%), Postives = 39/53 (73.58%), Query Frame = -3 Query: 277 EVYKKVESMSVEIKMAGCMPDLSCALHDVEVEDRELMMYYPSENLDVVFGIMN 435 ++ +K++ +S E++ +G P+L ALHDVE +++E M++ SE L VVFG++N Sbjct: 652 QITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLN 704
BLAST of FC868853 vs. ExPASy Swiss-Prot
Match: PP406_ARATH (Pentatricopeptide repeat-containing protein At5g39680 OS=Arabidopsis thaliana GN=EMB2744 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.313e-20 Identity = 34/58 (58.62%), Postives = 44/58 (75.86%), Query Frame = -1 Query: 108 ILSPE-AVIQVTKNVRVCNDYHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 278 I +PE + + VTKNVR+C+D HSA + IS I +R I++RD+NRFHHF G CSC DYW Sbjct: 653 IKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710 HSP 2 Score: 43.8986 bits (102), Expect = 2.313e-20 Identity = 21/51 (41.18%), Postives = 32/51 (62.75%), Query Frame = -3 Query: 280 VYKKVESMSVEIKMAGCMPDLSCALHDVEVEDRELMMYYPSENLDVVFGIM 432 +Y KV+ + +IK G PD++ A HDV+ E RE + Y SE L V +G++ Sbjct: 603 IYAKVKEVMSKIKPLGYSPDVAGAFHDVDEEQREDNLSYHSEKLAVAYGLI 653
BLAST of FC868853 vs. ExPASy Swiss-Prot
Match: PP198_ARATH (Pentatricopeptide repeat-containing protein At2g41080 OS=Arabidopsis thaliana GN=PCMP-H29 PE=2 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 2.317e-20 Identity = 32/57 (56.14%), Postives = 41/57 (71.93%), Query Frame = -1 Query: 108 ILSPEAVIQVTKNVRVCNDYHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 278 IL A I++ KN+RVC+D H AF++IS I R+I +RD +RFHHF G CSC DYW Sbjct: 594 ILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 650 HSP 2 Score: 45.4394 bits (106), Expect = 2.317e-20 Identity = 20/55 (36.36%), Postives = 35/55 (63.64%), Query Frame = -3 Query: 274 KEVYKKVESMSVEIKMAGCMPDLSCALHDVEVEDRELMMYYPSENLDVVFGIMNL 438 KE+Y ++ +++E+K+ G PD + LHD++ E++E + SE L V F +M L Sbjct: 541 KEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMIL 595
BLAST of FC868853 vs. ExPASy Swiss-Prot
Match: PP373_ARATH (Putative pentatricopeptide repeat-containing protein At5g09950 OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.578e-20 Identity = 31/50 (62.00%), Postives = 42/50 (84.00%), Query Frame = -1 Query: 108 IQVTKNVRVCNDYHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 257 I++ KN+RVC D HSAF++IS I R+II+RD+NRFHHF+ G CSC+D+W Sbjct: 946 IRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995 HSP 2 Score: 40.4318 bits (93), Expect = 6.578e-20 Identity = 18/48 (37.50%), Postives = 33/48 (68.75%), Query Frame = -3 Query: 289 VYKKVESMSVEIKMAGCMPDLSCALHDVEVEDRELMMYYPSENLDVVF 432 +YKK++ ++ +++ AG +P AL+D+E E++E ++ Y SE L V F Sbjct: 887 IYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAF 934
BLAST of FC868853 vs. ExPASy Swiss-Prot
Match: PP168_ARATH (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana GN=PCMP-H41 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 6.606e-20 Identity = 30/53 (56.60%), Postives = 40/53 (75.47%), Query Frame = -1 Query: 108 EAVIQVTKNVRVCNDYHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 266 + +++ KN+RVCND H+A +FIS + R+IIVRD RFHHF+ G CSC DYW Sbjct: 734 KTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786 HSP 2 Score: 42.743 bits (99), Expect = 6.606e-20 Identity = 19/53 (35.85%), Postives = 34/53 (64.15%), Query Frame = -3 Query: 277 EVYKKVESMSVEIKMAGCMPDLSCALHDVEVEDRELMMYYPSENLDVVFGIMN 435 E+Y ++ + EIK G +PD + LHD+E E +E ++ + SE L + FG+++ Sbjct: 678 EIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLIS 730 The following BLAST results are available for this feature:
BLAST of FC868853 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868853 ID=FC868853; Name=FC868853; organism=Citrus clementina; type=EST; length=440bpback to top |