FC868864
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868864 vs. ExPASy Swiss-Prot
Match: PP348_ARATH (Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana GN=EMB2758 PE=2 SV=2) HSP 1 Score: 155.992 bits (393), Expect = 2.191e-41 Identity = 67/149 (44.97%), Postives = 104/149 (69.80%), Query Frame = -2 Query: 184 KLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVIQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 630 ++R KGL+K +S +E ++ F+T ++ +P ++E+Y+++ ++ ++KM GY+PD L DVED+++EH+L HSE+LA+AF ++ + I++ KNLRVC DCHS +FIS I R+IIVRD+NRFHHF+ G CSC DYW Sbjct: 675 EIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823 HSP 2 Score: 34.2686 bits (77), Expect = 2.191e-41 Identity = 13/22 (59.09%), Postives = 17/22 (77.27%), Query Frame = -3 Query: 633 EHTGYFVLMSNIYAASNKWREV 698 EH GY VL+SN+YA++ KW V Sbjct: 652 EHVGYHVLLSNMYASAGKWEGV 673
BLAST of FC868864 vs. ExPASy Swiss-Prot
Match: PP301_ARATH (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana GN=PCMP-H24 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 6.318e-41 Identity = 72/150 (48.00%), Postives = 101/150 (67.33%), Query Frame = -2 Query: 184 GKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVIQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 633 GKLR M++KG+KK +S IE F D +P E++ +E + + +K AGY+ S LHDVE+E++E M+ YHSE+LAVA+GIM ++ I+V KNLRVC DCH+A ++++ I R II+RD NRFHHF+ G+CSC DYW Sbjct: 632 GKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781 HSP 2 Score: 33.8834 bits (76), Expect = 6.318e-41 Identity = 12/23 (52.17%), Postives = 20/23 (86.96%), Query Frame = -3 Query: 630 EHTGYFVLMSNIYAASNKWREVG 698 E++G +VL+SN+YA+S +W +VG Sbjct: 610 ENSGMYVLLSNLYASSGRWGDVG 632
BLAST of FC868864 vs. ExPASy Swiss-Prot
Match: PP271_ARATH (Putative pentatricopeptide repeat-containing protein At3g49140 OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 4.032e-40 Identity = 73/153 (47.71%), Postives = 97/153 (63.40%), Query Frame = -2 Query: 184 LREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEA-----VIQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 627 +R MK+KGLKK S +E + I F DR +P E+Y++++ + ++K GY+PD ALHDVE+ED+E L HSEKLA+ F +MN E I++TKNLR+C DCH A + IS I R+II+RD NRFH F G CSC DYW Sbjct: 534 IRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686 HSP 2 Score: 37.3502 bits (85), Expect = 4.032e-40 Identity = 16/33 (48.48%), Postives = 23/33 (69.70%), Query Frame = -3 Query: 600 EHTGYFVLMSNIYAASNKWREVGS*EKI*KIRG 698 E +GY+VL+SNIYA + +W EV + I K +G Sbjct: 510 EQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKG 542
BLAST of FC868864 vs. ExPASy Swiss-Prot
Match: PPR71_ARATH (Pentatricopeptide repeat-containing protein At1g34160 OS=Arabidopsis thaliana GN=PCMP-H68 PE=2 SV=2) HSP 1 Score: 149.828 bits (377), Expect = 3.354e-39 Identity = 67/153 (43.79%), Postives = 104/153 (67.97%), Query Frame = -2 Query: 184 GKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNL---TPEAVIQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 633 G++R+DM++K +KK S IE I F+ +D+ + W+E+Y+K++ + +I+ GY+ LHD+ +E++E+ L YHSEKLAVA+G+M + E+ ++V NLR+C DCH F+ IS IY+R+IIVRD RFH F+ G+CSC D+W Sbjct: 429 GRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKIREDGYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLMMMDGADEESPVRVINNLRICGDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581 HSP 2 Score: 33.113 bits (74), Expect = 3.354e-39 Identity = 12/20 (60.00%), Postives = 17/20 (85.00%), Query Frame = -3 Query: 630 GYFVLMSNIYAASNKWREVG 689 G FVL+SN+YAA +W++VG Sbjct: 410 GDFVLLSNVYAAQGRWKDVG 429
BLAST of FC868864 vs. ExPASy Swiss-Prot
Match: PP347_ARATH (Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana GN=PCMP-H53 PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 7.374e-39 Identity = 73/147 (49.66%), Postives = 97/147 (65.99%), Query Frame = -2 Query: 184 REDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVIQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 624 R MK +KK FS IE I F DR N + +Y+KV+ M +IK GY+P+ L DVE+E++E L YHSEKLAVAFG+++ P I+V KNLRVC DCH+A ++I+ +Y R+I++RDANRFH F+ G CSC DYW Sbjct: 844 RTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990 HSP 2 Score: 28.1054 bits (61), Expect = 7.374e-39 Identity = 10/17 (58.82%), Postives = 16/17 (94.12%), Query Frame = -3 Query: 633 FVLMSNIYAASNKWREV 683 +VL+SN+YAA++KW E+ Sbjct: 824 YVLLSNMYAAASKWDEM 840
BLAST of FC868864 vs. ExPASy Swiss-Prot
Match: PP168_ARATH (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana GN=PCMP-H41 PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 2.129e-38 Identity = 70/151 (46.36%), Postives = 101/151 (66.89%), Query Frame = -2 Query: 184 SGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVIQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 636 + K+R+ MK+ +KK FS IE + F D +P E+Y ++ + EIK GY+PD + LHD+E+E +E +L +HSEKLA+AFG+++ + +++ KNLRVCNDCH+A +FIS + R+IIVRD RFHHF+ G CSC DYW Sbjct: 636 AAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786 HSP 2 Score: 25.7942 bits (55), Expect = 2.129e-38 Identity = 9/27 (33.33%), Postives = 16/27 (59.26%), Query Frame = -3 Query: 618 EHTGYFVLMSNIYAASNKWREVGS*EK 698 E++G + ++N+Y+A KW E K Sbjct: 615 ENSGAYSALANLYSACGKWEEAAKIRK 641
BLAST of FC868864 vs. ExPASy Swiss-Prot
Match: PP251_ARATH (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 2.131e-38 Identity = 75/156 (48.08%), Postives = 103/156 (66.03%), Query Frame = -2 Query: 184 KQMARSGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVIQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 651 K+MA KLR M+ KGL+K A S IE GF + DR +P ++ + ++++ +++ GY+ D S LHDV++E + +L HSE+LAVAFGI+N P I+VTKN+R+C DCH A +FIS I R+IIVRD +RFHHF G CSC DYW Sbjct: 563 KEMA---KLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715 HSP 2 Score: 29.6462 bits (65), Expect = 2.131e-38 Identity = 10/22 (45.45%), Postives = 18/22 (81.82%), Query Frame = -3 Query: 633 EHTGYFVLMSNIYAASNKWREV 698 E+ G +VLM N+YA++ +W+E+ Sbjct: 544 ENMGAYVLMCNMYASNGRWKEM 565
BLAST of FC868864 vs. ExPASy Swiss-Prot
Match: PP316_ARATH (Pentatricopeptide repeat-containing protein At4g16835, mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=2) HSP 1 Score: 152.91 bits (385), Expect = 6.145e-38 Identity = 69/137 (50.36%), Postives = 97/137 (70.80%), Query Frame = -2 Query: 184 KPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVIQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 594 K +S IE + F ++DR++P ++KK++ + ++K+AGY P+L ALH+VE+E +E +L +HSEKLAVAFG + L + IQV KNLR+C DCH A +FIS I +R+IIVRD RFHHF+ G+CSC DYW Sbjct: 525 KVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 661 HSP 2 Score: 25.7942 bits (55), Expect = 6.145e-38 Identity = 8/17 (47.06%), Postives = 14/17 (82.35%), Query Frame = -3 Query: 633 FVLMSNIYAASNKWREV 683 +V ++NIYA+ N+W +V Sbjct: 490 YVQLANIYASKNRWEDV 506
BLAST of FC868864 vs. ExPASy Swiss-Prot
Match: PP285_ARATH (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2 SV=2) HSP 1 Score: 157.532 bits (397), Expect = 6.206e-38 Identity = 71/152 (46.71%), Postives = 107/152 (70.39%), Query Frame = -2 Query: 184 RSGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVIQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 639 ++ ++R +MK +G++K S IE+G ++ F D +P +++ +E++ ++ GY+PD SC LH+VE++++E +L HSEKLA+AFGI+N +P +I+V KNLRVCNDCH A +FIS I R+II+RD RFH F+ GTCSC DYW Sbjct: 739 KATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
BLAST of FC868864 vs. ExPASy Swiss-Prot
Match: PP341_ARATH (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 7.989e-38 Identity = 70/152 (46.05%), Postives = 103/152 (67.76%), Query Frame = -2 Query: 184 RSGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVIQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 639 ++ +R+ K + L K +++IE G+ F + D+ +P KE+Y+K+E + +++ AGY P+ ALHDVE+E+RE M+ HSE+LA+AFG++ P I++ KNLRVC DCH+ + IS I R I+VRDANRFHHF+ G CSC DYW Sbjct: 641 QAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792 HSP 2 Score: 23.483 bits (49), Expect = 7.989e-38 Identity = 8/24 (33.33%), Postives = 16/24 (66.67%), Query Frame = -3 Query: 627 EHTGYFVLMSNIYAASNKWREVGS 698 ++ GY VL+SNI++A + + + Sbjct: 621 DNVGYHVLLSNIHSADRNYPQAAT 644 The following BLAST results are available for this feature:
BLAST of FC868864 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 87
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868864 ID=FC868864; Name=FC868864; organism=Citrus clementina; type=EST; length=700bpback to top |