FC868990
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868990 vs. ExPASy Swiss-Prot
Match: GI1L3_ARATH (Probable gibberellin receptor GID1L3 OS=Arabidopsis thaliana GN=GID1L3 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.022e-19 Identity = 68/221 (30.77%), Postives = 95/221 (42.99%), Query Frame = 1 Query: 43 DGTITRDYSNYPSTTATPDPNDHTIAVSKDVPVNQSNKTWVRIFLPRQALDSSTKTKL---------PLIVYVHGGGLILLSAATKIYHDLCSDIAARVPAVIVSVDYRLAPEHRLPAAYYDALEVLHWIKTTQEHWLIQYAD-L*SCFIMGDSGGGNVAYHXXXXXXXXXXXXXXXXXXXXXXXXXFFGGVKRTESELRLANQPILLPSSTDLLWQLALP 675 DGT R + + + N S DV +++ R++ P A S + T L P+IV+ HGG SA + IY LC + AV+VSV+YR APE+R P AY D VL W+ ++ WL D F+ GDS GGN+ ++ FGG +RTESE RL + + D W+ LP Sbjct: 38 DGTFNRHLAEFLDRKVPANANPVNGVFSFDVIIDRQTNLLSRVYRPADAGTSPSITDLQNPVDGEIVPVIVFFHGGSFAHSSANSAIYDTLCRRLVGLCGAVVVSVNYRRAPENRYPCAYDDGWAVLKWVNSSS--WLRSKKDSKVRIFLAGDSSGGNIVHN-----VAVRAVESRIDVLGNILLNPMFGGTERTESEKRLDGKYFVTVRDRDWYWRAFLP 251
BLAST of FC868990 vs. ExPASy Swiss-Prot
Match: GID1_ORYSJ (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 8.696e-18 Identity = 69/235 (29.36%), Postives = 98/235 (41.70%), Query Frame = 1 Query: 28 VIVNADGTITRDYSNYPSTTATPDPNDHTIAVSKDVPVNQSNKTWVRIF--------------LPRQAL----DSSTKTKLPLIVYVHGGGLILLSAATKIYHDLCSDIAARVPAVIVSVDYRLAPEHRLPAAYYDALEVLHWIKTTQEHWLIQYADL*S-CFIMGDSGGGNVAYHXXXXXXXXXXXXXXXXXXXXXXXXXFFGGVKRTESELRLANQPILLPSSTDLLWQLALP 675 ++ ADGT RD Y + S D ++QS VRI+ + R L D+ P+I++ HGG + SA++ IY LC V+VSV+YR APEHR P AY D L W+ + + ++ D + F+ GDS GGN+A+H FGG +RTESE RL + + D W+ LP Sbjct: 33 ILRRADGTFERDLGEYLDRRVPANARPLEGVSSFDHIIDQSVGLEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMS--QPFMRSGGDAQARVFLSGDSSGGNIAHH-----VAVRAADEGVKVCGNILLNAMFGGTERTESERRLDGKYFVTLQDRDWYWKAYLP 260
BLAST of FC868990 vs. ExPASy Swiss-Prot
Match: GI1L1_ARATH (Probable gibberellin receptor GID1L1 OS=Arabidopsis thaliana GN=GID1L1 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.388e-15 Identity = 64/228 (28.07%), Postives = 93/228 (40.79%), Query Frame = 1 Query: 28 VIVNADGTITRDYSNYPSTTATPDPNDHTIAVSKDVPVNQSNKTWVRIFLPRQALDSSTKTKL-----------PLIVYVHGGGLILLSAATKIYHDLCSDIAARVPAVIVSVDYRLAPEHRLPAAYYDALEVLHWIKTTQEHWLIQYAD-L*SCFIMGDSGGGNVAYHXXXXXXXXXXXXXXXXXXXXXXXXXFFGGVKRTESELRLANQPILLPSSTDLLWQLALP 675 ++ DGT R + Y T + N S DV +++ R++ P A + L P+I++ HGG SA + IY LC + V+VSV+YR APE+ P AY D L+W+ + WL D F+ GDS GGN+A++ FGG +RTESE L + + D W+ LP Sbjct: 33 ILRRPDGTFNRHLAEYLDRKVTANANPVDGVFSFDVLIDRRINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWVNS--RSWLKSKKDSKVHIFLAGDSSGGNIAHN-----VALRAGESGIDVLGNILLNPMFGGNERTESEKSLDGKYFVTVRDRDWYWKAFLP 253
BLAST of FC868990 vs. ExPASy Swiss-Prot
Match: GI1L2_ARATH (Probable gibberellin receptor GID1L2 OS=Arabidopsis thaliana GN=GID1L2 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.368e-15 Identity = 64/231 (27.71%), Postives = 94/231 (40.69%), Query Frame = 1 Query: 28 VIVNADGTITRDYSNY--PSTTATPDPNDHTIAVSKDVPVNQSNKTWVRIFLPRQALDS------------STKTKLPLIVYVHGGGLILLSAATKIYHDLCSDIAARVPAVIVSVDYRLAPEHRLPAAYYDALEVLHWIKTTQEHWLIQYADL-*SCFIMGDSGGGNVAYHXXXXXXXXXXXXXXXXXXXXXXXXXFFGGVKRTESELRLANQPILLPSSTDLLWQLALP 675 V+ DG+ RD + + A P D + V+ + RI+ P L ST +P++++ HGG SA + IY C + V+VSVDYR +PEHR P AY D L+W+K+ WL D ++ GDS GGN+A++ FGG +RT+SE L + + D W+ LP Sbjct: 33 VLRRPDGSFNRDLAEFLDRKVPANSFPLDGVFSFDH---VDSTTNLLTRIYQPASLLHQTRHGTLELTKPLSTTEIVPVLIFFHGGSFTHSSANSAIYDTFCRRLVTICGVVVVSVDYRRSPEHRYPCAYDDGWNALNWVKS--RVWLQSGKDSNVYVYLAGDSSGGNIAHN-----VAVRATNEGVKVLGNILLHPMFGGQERTQSEKTLDGKYFVTIQDRDWYWRAYLP 253 The following BLAST results are available for this feature:
BLAST of FC868990 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868990 ID=FC868990; Name=FC868990; organism=Citrus clementina; type=EST; length=676bpback to top |