FC868992
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868992 vs. ExPASy Swiss-Prot
Match: TLP6_ORYSJ (Tubby-like F-box protein 6 OS=Oryza sativa subsp. japonica GN=TULP6 PE=2 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 9.158e-61 Identity = 117/176 (66.48%), Postives = 134/176 (76.14%), Query Frame = 1 Query: 175 SIIHDMMWRRSHRVVGDAADHDMAGGSSPTC----CWANLPQELLREILAKIEAADSAWPSRRSVVACAGVCRSWRQITKEIVKVPELSGYLTFPISVKQPGPRDYLLQCFIKRNRSTQTYHLYLSLTNALADDGKFLLAARKCRRATCTDYIISLHSDDMSKGSSTYLGKLRSNF 690 SI + RSHR G A G + CWA LP ELLRE+L +IE ++ WPSRR VVACAGVCRSWR ITKEIV+VPE SG LTFPIS+KQPGPRD L+CFI+RNR+TQTY+LY+ LT ALADDGKFLLAARKCR+ TCTDY+ISL DMSKGS+TY+GKLRSNF Sbjct: 16 SISRHSLRSRSHRGGGGAPRVAAVGPAEAAAMQQSCWAQLPPELLREVLVRIEESEVWWPSRRDVVACAGVCRSWRGITKEIVRVPEASGKLTFPISLKQPGPRDGTLKCFIRRNRTTQTYYLYIGLTEALADDGKFLLAARKCRKPTCTDYLISLDMSDMSKGSNTYIGKLRSNF 191
BLAST of FC868992 vs. ExPASy Swiss-Prot
Match: TLP9_ARATH (Tubby-like F-box protein 9 OS=Arabidopsis thaliana GN=TULP9 PE=1 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 3.257e-58 Identity = 115/177 (64.97%), Postives = 136/177 (76.84%), Query Frame = 1 Query: 163 MTIKSIIHDMMWRRSHRVVGDAADHDMAGGSSPTCCWANLPQELLREILAKIEAADSA-WPSRRSVVACAGVCRSWRQITKEIVKVPELSGYLTFPISVKQPGPRDYLLQCFIKRNRSTQTYHLYLSLTNALADDGKFLLAARKCRRATCTDYIISLHSDDMSKGSSTYLGKLRSNF 690 MT +S++ +M R HRVV AA SS W+ LP+ELLREIL ++E D WPSRR+VVACAGVCRSWR +TKEIV VPE S LTFPIS+KQ GPRD L+QCFIKRNR+TQ+YHLYL LT +L D+GKFLLAA K +RATCTDYIISL SDD+SK S+ YLG++RSNF Sbjct: 1 MTFRSLLQEMR-SRPHRVVHAAAS---TANSSDPFSWSELPEELLREILIRVETVDGGDWPSRRNVVACAGVCRSWRILTKEIVAVPEFSSKLTFPISLKQSGPRDSLVQCFIKRNRNTQSYHLYLGLTTSLTDNGKFLLAASKLKRATCTDYIISLRSDDISKRSNAYLGRMRSNF 173
BLAST of FC868992 vs. ExPASy Swiss-Prot
Match: TLP11_ARATH (Tubby-like F-box protein 11 OS=Arabidopsis thaliana GN=TULP11 PE=2 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 3.257e-58 Identity = 117/180 (65.00%), Postives = 136/180 (75.56%), Query Frame = 1 Query: 163 MTIKSIIHDMMWRRSHRVVGD---AADHDMAGGSSPTCCWANLPQELLREILAKIEAADSA-WPSRRSVVACAGVCRSWRQITKEIVKVPELSGYLTFPISVKQPGPRDYLLQCFIKRNRSTQTYHLYLSLTNALADDGKFLLAARKCRRATCTDYIISLHSDDMSKGSSTYLGKLRSNF 690 MT++S+I +M R HRVV D AA D SS W+ +P+ELLREIL ++EAAD WPSRRSVVACAGVCR WR + E V VPE+S LTFPIS+KQPGPRD L+QCFIKRNR TQ+YHLYL LTN+L DDGKFLLAA K + TCTDYIISL SDDMS+ S Y+GK+RSNF Sbjct: 1 MTLRSLILEMR-SRPHRVVHDLAAAAAADSTSVSSQDYRWSEIPEELLREILIRVEAADGGGWPSRRSVVACAGVCRGWRLLMNETVVVPEISSKLTFPISLKQPGPRDSLVQCFIKRNRITQSYHLYLGLTNSLTDDGKFLLAACKLKHTTCTDYIISLRSDDMSRRSQAYVGKVRSNF 179
BLAST of FC868992 vs. ExPASy Swiss-Prot
Match: TLP11_ORYSJ (Tubby-like F-box protein 11 OS=Oryza sativa subsp. japonica GN=TULP11 PE=2 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.281e-54 Identity = 97/141 (68.79%), Postives = 118/141 (83.69%), Query Frame = 1 Query: 268 CWANLPQELLREILAKIEAADSAWPSRRSVVACAGVCRSWRQITKEIVKVPELSGYLTFPISVKQPGPRDYLLQCFIKRNRSTQTYHLYLSLTNALADDGKFLLAARKCRRATCTDYIISLHSDDMSKGSSTYLGKLRSNF 690 CW LP ELLRE+LA++E ++ WP RR VVACAGVCRSWR I +EIV+ PE SG LTFPIS+KQPGPRD ++CFI RNR+TQTY+LY+ LT+AL DDGKFLLAARKCRR TCT+Y+ISL +D+SK + +Y+GKLRSNF Sbjct: 54 CWTQLPPELLREVLARVEESEGWWPRRRDVVACAGVCRSWRGIVREIVRTPEASGNLTFPISLKQPGPRDAPMKCFIVRNRTTQTYYLYIGLTDALTDDGKFLLAARKCRRTTCTEYLISLDMNDISKRTDSYVGKLRSNF 194
BLAST of FC868992 vs. ExPASy Swiss-Prot
Match: TLP3_ARATH (Tubby-like F-box protein 3 OS=Arabidopsis thaliana GN=TULP3 PE=2 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 1.673e-54 Identity = 105/164 (64.02%), Postives = 131/164 (79.88%), Query Frame = 1 Query: 202 RSHRVVGDAADHDMAGGSSPTCCWANLPQELLREILAKIEAADSAWPSRRSVVACAGVCRSWRQITKEIVKVPELSGYLTFPISVKQPGPRDYLLQCFIKRNRSTQTYHLYLSLTNALA-DDGKFLLAARKCRRATCTDYIISLHSDDMSKGSSTYLGKLRSNF 690 RS RVV D + A S CWA++P ELLR++L +IE ++ WPSR++VV+CAGVCR+WR+I KEIV+VPELS LTFPIS+KQPGPR L+QC+I RNRS QTY+LYL L A + DDGKFLLAA++ RR TCTDYIISL+ DD+S+GS+TY+GKLRSNF Sbjct: 32 RSQRVVQDTSVPVDAFKQS---CWASMPPELLRDVLMRIEQSEDTWPSRKNVVSCAGVCRNWREIVKEIVRVPELSSKLTFPISLKQPGPRGSLVQCYIMRNRSNQTYYLYLGLNQAASNDDGKFLLAAKRFRRPTCTDYIISLNCDDVSRGSNTYIGKLRSNF 192
BLAST of FC868992 vs. ExPASy Swiss-Prot
Match: TLP8_ORYSJ (Tubby-like F-box protein 8 OS=Oryza sativa subsp. japonica GN=TULP8 PE=2 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 6.157e-49 Identity = 91/164 (55.49%), Postives = 127/164 (77.44%), Query Frame = 1 Query: 202 RSHRVVGDAADHDMAGGSSPTCCWANLPQELLREILAKIEAADSAWPSRRSVVACAGVCRSWRQITKEIVKVPELSGYLTFPISVKQPGPRDYLLQCFIKRNRSTQTYHLYLSLTNA-LADDGKFLLAARKCRRATCTDYIISLHSDDMSKGSSTYLGKLRSNF 690 +S V + D D+ S WA+LP ELLR+++ ++EA++S WPSR+ VV+CA VC++WR++ KEIV PE G LTFP+S+KQPGPRD ++QCFIKR++S TYHLYL L+ A LAD GKFLL+A++ R+ TCT+Y+IS+ +D++S+ SSTY+GKLRSNF Sbjct: 39 KSQSTVHELCDADLIIQESR---WASLPPELLRDVIRRLEASESTWPSRKDVVSCAAVCKAWREMCKEIVLSPEFCGKLTFPLSLKQPGPRDGMIQCFIKRDKSKSTYHLYLCLSTAVLADSGKFLLSAKRHRKTTCTEYVISMDADNISRSSSTYIGKLRSNF 199
BLAST of FC868992 vs. ExPASy Swiss-Prot
Match: TLP1_ARATH (Tubby-like F-box protein 1 OS=Arabidopsis thaliana GN=TULP1 PE=2 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 6.157e-49 Identity = 87/141 (61.70%), Postives = 118/141 (83.69%), Query Frame = 1 Query: 271 WANLPQELLREILAKIEAADSAWPSRRSVVACAGVCRSWRQITKEIVKVPELSGYLTFPISVKQPGPRDYLLQCFIKRNRSTQTYHLYLSLTNA-LADDGKFLLAARKCRRATCTDYIISLHSDDMSKGSSTYLGKLRSNF 690 WANLP ELLR+++ ++E ++S WP+RR VVACA VCRSWR + KEIV+ PELSG +TFP+S+KQPGPRD +QCFIKR++S TYHLYL L+ A L ++GKFLL+A++ RR T T+Y+IS+H+D +S+ S+TY+GK+RSNF Sbjct: 57 WANLPPELLRDVIKRLEESESVWPARRHVVACASVCRSWRDMCKEIVQSPELSGKITFPVSLKQPGPRDATMQCFIKRDKSNLTYHLYLCLSPALLVENGKFLLSAKRIRRTTYTEYVISMHADTISRSSNTYIGKIRSNF 197
BLAST of FC868992 vs. ExPASy Swiss-Prot
Match: TLP14_ORYSJ (Tubby-like F-box protein 14 OS=Oryza sativa subsp. japonica GN=TULP14 PE=2 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.791e-48 Identity = 90/166 (54.22%), Postives = 128/166 (77.11%), Query Frame = 1 Query: 202 RSHRVVGDAADHDMAGGSSP---TCCWANLPQELLREILAKIEAADSAWPSRRSVVACAGVCRSWRQITKEIVKVPELSGYLTFPISVKQPGPRDYLLQCFIKRNRSTQTYHLYLSLTNA-LADDGKFLLAARKCRRATCTDYIISLHSDDMSKGSSTYLGKLRSN 687 RSH V + D A ++ + CWANLP ELLR+++ ++EA+++AWPSR++VVACA VCR+WR + +EIVK PE G +TFP+S+KQPGPR+ +QCFIKR++STQTY+LYL L++A L + GKFLL+A++ RATCT+Y I + +D+ S+ S+ Y+GKLRSN Sbjct: 33 RSHSAVHELRDGHAAAAAADVVQSSCWANLPPELLRDVIERLEASEAAWPSRKNVVACAAVCRTWRDMCREIVKNPEFCGKITFPVSLKQPGPRNGAIQCFIKRDKSTQTYNLYLCLSSAVLVESGKFLLSAKRYSRATCTEYTIFMSADNTSRSSNMYIGKLRSN 198
BLAST of FC868992 vs. ExPASy Swiss-Prot
Match: TLP13_ORYSJ (Tubby-like F-box protein 13 OS=Oryza sativa subsp. japonica GN=TULP13 PE=2 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.340e-48 Identity = 86/142 (60.56%), Postives = 123/142 (86.62%), Query Frame = 1 Query: 268 CWANLPQELLREILAKIEAADSAWPSRRSVVACAGVCRSWRQITKEIVKVPELSGYLTFPISVKQPGPRDYLLQCFIKRNRSTQTYHLYLSLTNA-LADDGKFLLAARKCRRATCTDYIISLHSDDMSKGSSTYLGKLRSNF 690 CWA+LP ELLR+I+ ++E +++ WPSR+ VVACAGVCR+WR++ KEIVK PEL G +TFPIS++QPGPRD +QCFI+R++STQTY+LYLSL +A L D+GKFLL+A++ ATCT+Y+IS++++++S+ ++T +GKLRSNF Sbjct: 52 CWASLPPELLRDIIERLEESEATWPSRKHVVACAGVCRTWREMCKEIVKNPELCGKITFPISLRQPGPRDGTMQCFIRRDKSTQTYYLYLSLGSAVLVDNGKFLLSAKRNWHATCTEYVISMNANNLSRSTNTNIGKLRSNF 193
BLAST of FC868992 vs. ExPASy Swiss-Prot
Match: TLP5_ARATH (Tubby-like F-box protein 5 OS=Arabidopsis thaliana GN=TULP5 PE=2 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 3.991e-48 Identity = 85/141 (60.28%), Postives = 119/141 (84.40%), Query Frame = 1 Query: 271 WANLPQELLREILAKIEAADSAWPSRRSVVACAGVCRSWRQITKEIVKVPELSGYLTFPISVKQPGPRDYLLQCFIKRNRSTQTYHLYLSLTNA-LADDGKFLLAARKCRRATCTDYIISLHSDDMSKGSSTYLGKLRSNF 690 WANLP LLR+++ K++ ++S WP+R+ VVACAGVC++WR + K+IVK PE SG LTFP+S+KQPGPRD ++QC+IKR++S TYHLYLSL+ A L + GKFLL+A++ RRAT T+Y+IS+ +D++S+ SSTY+GKL+SNF Sbjct: 55 WANLPAALLRDVMKKLDESESTWPARKQVVACAGVCKTWRLMCKDIVKSPEFSGKLTFPVSLKQPGPRDGIIQCYIKRDKSNMTYHLYLSLSPAILVESGKFLLSAKRSRRATYTEYVISMDADNISRSSSTYIGKLKSNF 195 The following BLAST results are available for this feature:
BLAST of FC868992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868992 ID=FC868992; Name=FC868992; organism=Citrus clementina; type=EST; length=714bpback to top |