FC869038
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869038 vs. ExPASy Swiss-Prot
Match: WWOX_CHICK (WW domain-containing oxidoreductase OS=Gallus gallus GN=WWOX PE=2 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 8.489e-25 Identity = 60/145 (41.38%), Postives = 90/145 (62.07%), Query Frame = 3 Query: 282 FSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNXXXXXXXXXXXXDTMKKTA 716 + +STA E+ QG D +G I+TGA+SGIG ETA+ AL G +VI+A RNM+ G D + I++E AKV+AM LD++SL SV+ FA + S+ PL+IL+ NA I S + L++D +E F N D +++++ Sbjct: 107 YDGNSTAMEILQGRDLSGKVIIITGANSGIGFETAKSFALHGAYVILACRNMSRGNDAVQRILEEWHKAKVEAMTLDLASLRSVQNFAEAFKSKNMPLHILVCNAAIFGSSWCLTEDGLESTFQVNHLGHFYLVQLLEDILRRSS 251
BLAST of FC869038 vs. ExPASy Swiss-Prot
Match: WWOX_HUMAN (WW domain-containing oxidoreductase OS=Homo sapiens GN=WWOX PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.226e-24 Identity = 58/126 (46.03%), Postives = 81/126 (64.29%), Query Frame = 3 Query: 282 FSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATN 659 + S+TA E+ QG D TG +VTGA+SGIG ETA+ AL G HVI+A RNMA + I++E AKV+AM LD++ L SV+ FA + ++ PL++L+ NA A P+ L+KD +E F N Sbjct: 107 YDGSTTAMEILQGRDFTGKVVVVTGANSGIGFETAKSFALHGAHVILACRNMARASEAVSRILEEWHKAKVEAMTLDLALLRSVQHFAEAFKAKNVPLHVLVCNAATFALPWSLTKDGLETTFQVN 232
BLAST of FC869038 vs. ExPASy Swiss-Prot
Match: WWOX_PONAB (WW domain-containing oxidoreductase OS=Pongo abelii GN=WWOX PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.226e-23 Identity = 57/126 (45.24%), Postives = 81/126 (64.29%), Query Frame = 3 Query: 282 FSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATN 659 + S+TA E+ QG D TG +VTGA+SGIG ETA+ AL G HVI+A RNMA + I++E AKV+A+ LD++ L SV+ FA + ++ PL++L+ NA A P+ L+KD +E F N Sbjct: 107 YDGSTTALEILQGRDFTGKVVVVTGANSGIGFETAKSFALHGAHVILACRNMARASEAVSRILEEWHKAKVEAVTLDLALLRSVQHFAEAFKAKNVPLHVLVCNAATFALPWSLTKDGLETTFQVN 232
BLAST of FC869038 vs. ExPASy Swiss-Prot
Match: WWOX_MOUSE (WW domain-containing oxidoreductase OS=Mus musculus GN=Wwox PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.084e-23 Identity = 56/126 (44.44%), Postives = 81/126 (64.29%), Query Frame = 3 Query: 282 FSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATN 659 + S+TA E+ QG D TG +VTGA+SGIG ETA+ AL G HVI+A RN++ + I++E AKV+AM LD++ L SV+ FA + ++ L++L+ NAG A P+ L+KD +E F N Sbjct: 107 YDGSTTAMEILQGRDFTGKVVLVTGANSGIGFETAKSFALHGAHVILACRNLSRASEAVSRILEEWHKAKVEAMTLDLAVLRSVQHFAEAFKAKNVSLHVLVCNAGTFALPWGLTKDGLETTFQVN 232
BLAST of FC869038 vs. ExPASy Swiss-Prot
Match: WWOX_DANRE (WW domain-containing oxidoreductase OS=Danio rerio GN=wwox PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.081e-19 Identity = 50/126 (39.68%), Postives = 75/126 (59.52%), Query Frame = 3 Query: 273 PSGFSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQF 650 P + ++ A E+ G D + IVTGA+SGIG ETAR AL G HVI+A RN + I+ E A+V+ + LD++SL SVR+FA + + PL++L+ NA + + P+ L++D E F Sbjct: 101 PKRYDGNTGALEILHGQDLSDKVIIVTGANSGIGFETARSFALHGAHVILACRNQSRASKAASLIMGEWSKARVEVLPLDLASLRSVRQFAELFKATKLPLHVLVCNAAVCSQPWRLTEDGFESTF 226
BLAST of FC869038 vs. ExPASy Swiss-Prot
Match: RDH13_HUMAN (Retinol dehydrogenase 13 OS=Homo sapiens GN=RDH13 PE=1 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 6.515e-17 Identity = 53/132 (40.15%), Postives = 78/132 (59.09%), Query Frame = 3 Query: 333 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNM----AAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNXXXXXXXXXXXXDTMKKTA 716 G T IVTGA++GIG +TA LA RG ++I+A R+M AA KD+R E + V+A LD++SL S+R+FA++ + ++ILINNAG+M P ++D E+QF N D +K +A Sbjct: 38 GKTVIVTGANTGIGKQTALELARRGGNIILACRDMEKCEAAAKDIRG----ETLNHHVNARHLDLASLKSIREFAAKIIEEEERVDILINNAGVMRCPHWTTEDGFEMQFGVNHLGHFLLTNLLLDKLKASA 165
BLAST of FC869038 vs. ExPASy Swiss-Prot
Match: YJCD_SCHPO (Uncharacterized oxidoreductase C736.13 OS=Schizosaccharomyces pombe GN=SPCC736.13 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.896e-16 Identity = 51/133 (38.35%), Postives = 74/133 (55.64%), Query Frame = 3 Query: 324 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNXXXXXXXXXXXXDTMKKTAQK 722 D TG A+VTG+S GIG TA LA +G V +A RN + V + I E+ +K+ + LD+ SV + A + ++ L+IL+NNAGIM PF L+KD ELQ TN T+++TA++ Sbjct: 39 DLTGKVALVTGSSGGIGYVTALELARKGAKVYLAGRNEEKYQKVMKQIHDEVRHSKIRFLRLDLLDFESVYQAAESFIAKEEKLHILVNNAGIMNPPFELTKDGYELQIQTNYLSHYLFTELLLPTLRRTAEE 171
BLAST of FC869038 vs. ExPASy Swiss-Prot
Match: WWOX_DROME (WW domain-containing oxidoreductase OS=Drosophila melanogaster GN=Wwox PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.233e-16 Identity = 51/125 (40.80%), Postives = 72/125 (57.60%), Query Frame = 3 Query: 282 FSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDA--MELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQF 650 F + STA +V G D G TA++TGA+ GIG ETAR LA G +I A RN ++ + E I +E P+A+ LD+SSL SV++F E ++ LI NAG+ A P+ + D +E F Sbjct: 104 FDSCSTALQVLHGKDLHGRTALITGANCGIGYETARSLAHHGCEIIFACRNRSSAEAAIERIAQERPAARSRCRFAALDLSSLRSVQRFVEEIKQSVSHIDYLILNAGVFALPYTRTVDGLETTF 228
BLAST of FC869038 vs. ExPASy Swiss-Prot
Match: RDH12_MOUSE (Retinol dehydrogenase 12 OS=Mus musculus GN=Rdh12 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.233e-16 Identity = 45/135 (33.33%), Postives = 73/135 (54.07%), Query Frame = 3 Query: 312 TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNXXXXXXXXXXXXDTMKKTA 716 T + G ++TGA++GIG ETAR LA RG V +A R++ G+ I + +++V +LD+S S+R FA + ++ + L+ILINNAG+M P+ + D E F N + +K++A Sbjct: 32 TTNVQIPGKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIRADTKNSQVLVRKLDLSDTKSIRAFAERFLAEEKKLHILINNAGVMMCPYSKTTDGFETHFGVNHLGHFLLTYLLLERLKESA 166
BLAST of FC869038 vs. ExPASy Swiss-Prot
Match: DHRSX_MOUSE (Dehydrogenase/reductase SDR family member on chromosome X homolog OS=Mus musculus GN=Dhrsx PE=2 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 4.223e-16 Identity = 46/109 (42.20%), Postives = 69/109 (63.30%), Query Frame = 3 Query: 333 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATN 659 G AIVTGA++GIG TAR LA G+ V++A + G++V +I E+ S + + LD++SLASVR FA ++ + G PL++L+NNAG+M P ++D E N Sbjct: 43 GRVAIVTGATAGIGRSTARQLARLGMCVVVAGNDEHRGQEVVSSIRAEMGSDRAHFLPLDLASLASVRGFARDFQALGLPLHLLVNNAGVMLEPRAETEDGFERHLGVN 151 The following BLAST results are available for this feature:
BLAST of FC869038 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869038 ID=FC869038; Name=FC869038; organism=Citrus clementina; type=EST; length=736bpback to top |