FC869096
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869096 vs. ExPASy Swiss-Prot
Match: CCD55_MOUSE (Coiled-coil domain-containing protein 55 OS=Mus musculus GN=Ccdc55 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 7.208e-24 Identity = 60/147 (40.82%), Postives = 88/147 (59.86%), Query Frame = 3 Query: 198 VEGEISRQAIKNRALKEIEEQQRKALAEDPNVFDYDGCYDEMKQKSVRR--KVQDRADTQPKYIHKLIHKADERKREHDIIYERKLTKERSKEDHLFADKEKFVTGAYKKKLEEQQRWAREQALRDLRDERDDVTKKTDVSDFYFNL 632 V + R+A K +A+K+ + + +KALAED V++YD YDEM++K K+ D +PKYIH L+ + RK+E + E+K+ +ER E+ F DKE FVT AYKKKLEE+ + + DVTK+ D+S FY +L Sbjct: 40 VSESLQREAAKKQAMKQTKLEIQKALAEDSTVYEYDSVYDEMQKKKEENNPKLLPGKDRKPKYIHNLLKAVEIRKKEQEKRMEKKIQREREMENGEFDDKEAFVTSAYKKKLEERAEEEEREKRAAALEAHLDVTKQKDLSGFYRHL 186
BLAST of FC869096 vs. ExPASy Swiss-Prot
Match: CCD55_RAT (Coiled-coil domain-containing protein 55 OS=Rattus norvegicus GN=Ccdc55 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.229e-23 Identity = 60/147 (40.82%), Postives = 88/147 (59.86%), Query Frame = 3 Query: 198 VEGEISRQAIKNRALKEIEEQQRKALAEDPNVFDYDGCYDEMKQKSVRR--KVQDRADTQPKYIHKLIHKADERKREHDIIYERKLTKERSKEDHLFADKEKFVTGAYKKKLEEQQRWAREQALRDLRDERDDVTKKTDVSDFYFNL 632 V + R+A K +A+++ + + +KALAED V++YD YDEM++K K+ D +PKYIH L+ + RK+E + E+K+ +ER E F DKE FVT AYKKKLEE+ + + R DVTK+ D+S FY +L Sbjct: 40 VSESLQREAAKKQAMRQTKLEIQKALAEDSTVYEYDSIYDEMQKKKEENNPKLLMGKDRKPKYIHNLLKAVEIRKKEQEKRMEKKIQREREMEKGEFDDKEAFVTSAYKKKLEERAEEEEREKRAAALEARLDVTKQKDLSGFYRHL 186
BLAST of FC869096 vs. ExPASy Swiss-Prot
Match: CCD55_BOVIN (Coiled-coil domain-containing protein 55 OS=Bos taurus GN=CCDC55 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.097e-23 Identity = 60/147 (40.82%), Postives = 88/147 (59.86%), Query Frame = 3 Query: 198 VEGEISRQAIKNRALKEIEEQQRKALAEDPNVFDYDGCYDEMKQKSVRR--KVQDRADTQPKYIHKLIHKADERKREHDIIYERKLTKERSKEDHLFADKEKFVTGAYKKKLEEQQRWAREQALRDLRDERDDVTKKTDVSDFYFNL 632 V + R+A K +A+K+ + + +KALAED V++YD YDEM++K K+ D +PKYIH L+ + RK+E + E+K+ +ER E F DKE FVT AYKKKL+E+ + + R DVTK+ D+S FY +L Sbjct: 42 VSESLQREAAKKQAMKQTKLEIQKALAEDSTVYEYDSIYDEMQKKKEESNPKLLLGKDRKPKYIHNLLKAVEIRKKEQEKRMEKKIQREREMEKGEFDDKEAFVTSAYKKKLQERAEEEERERRAAALEARLDVTKQRDLSGFYRHL 188
BLAST of FC869096 vs. ExPASy Swiss-Prot
Match: CCD55_HUMAN (Coiled-coil domain-containing protein 55 OS=Homo sapiens GN=CCDC55 PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.041e-22 Identity = 64/151 (42.38%), Postives = 90/151 (59.60%), Query Frame = 3 Query: 198 VEGEISRQAIKNRALKEIEEQQRKALAEDPNVFDYDGCYDEMKQKSVRR--KVQDRADTQPKYIHKLIHKADERKREHDIIYERKLTKERSKEDHLFADKEKFVTGAYKKKL----EEQQRWAREQALRDLRDERDDVTKKTDVSDFYFNL 632 V + R+A K +A+K+ + + +KALAED V++YD YDEM++K K+ D +PKYIH L+ + RK+E + E+K+ +ER E F DKE FVT AYKKKL EE++R R AL DVTK+ D+S FY +L Sbjct: 41 VSESLQREAAKKQAMKQTKLEIQKALAEDATVYEYDSIYDEMQKKKEENNPKLLLGKDRKPKYIHNLLKAVEIRKKEQEKRMEKKIQREREMEKGEFDDKEAFVTSAYKKKLQERAEEEEREKRAAALEACL----DVTKQKDLSGFYRHL 187
BLAST of FC869096 vs. ExPASy Swiss-Prot
Match: CCD55_DANRE (Coiled-coil domain-containing protein 55 OS=Danio rerio GN=ccdc55 PE=1 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 3.955e-22 Identity = 53/140 (37.86%), Postives = 87/140 (62.14%), Query Frame = 3 Query: 210 ISRQAIKNRALKEIEEQQRKALAEDPNVFDYDGCYDEMKQKSVR--RKVQDRADTQPKYIHKLIHKADERKREHDIIYERKLTKERSKEDHLFADKEKFVTGAYKKKLEEQQRWAREQALRDLRDERDDVTKKTDVSDFY 623 + ++AIK + +K+ + +KAL ED V++YD YD+++++ + +K+ D +PKYI++L+ +ERK+E + ERK+ KER E FADKE FVT AY++KL+E+Q + + DV K+ D+S FY Sbjct: 43 LQKEAIKKKMMKQTRLEMQKALEEDSTVYEYDNVYDDIQKQRLESNKKLLGGEDKKPKYINQLLRAVEERKKEQERRDERKIQKEREAEGEKFADKEAFVTSAYRQKLKERQEELEREKREAELEAALDVKKQKDLSGFY 182
BLAST of FC869096 vs. ExPASy Swiss-Prot
Match: CCD55_CAEBR (Coiled-coil domain-containing protein 55 homolog OS=Caenorhabditis briggsae GN=ccdc-55 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.779e-14 Identity = 48/126 (38.10%), Postives = 72/126 (57.14%), Query Frame = 3 Query: 234 RALKEIEEQQRKALAEDPNVFDYDGCYDEMKQ-KSVRRKVQDRADT--QPKYIHKLIHKADERKREHDIIYERKLTKERSKEDHLFADKEKFVTGAYKKKLEEQQRWAREQALRDLRDERDDVTKK 602 R K E + +KA AEDP +FDYDG YDE++ K+ +++ +AD + KY +I R+ E ER+ KER KE F DKE FVTGAY+K+ EE +++ ++A ++ V K+ Sbjct: 51 RIQKAAEREHQKAEAEDPTIFDYDGNYDEIQAIKNEKKEEARKADKNKESKYAEAIIKAHARRQLEQFSREERQQIKEREKEAGEFDDKEVFVTGAYRKQQEEVKKYREQEAEEAAFNDMTSVQKQ 176
BLAST of FC869096 vs. ExPASy Swiss-Prot
Match: CCD55_CAEEL (Coiled-coil domain-containing protein 55 homolog OS=Caenorhabditis elegans GN=ccdc-55 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.964e-14 Identity = 47/126 (37.30%), Postives = 71/126 (56.35%), Query Frame = 3 Query: 234 RALKEIEEQQRKALAEDPNVFDYDGCYDEMKQ-KSVRRKVQDRADT--QPKYIHKLIHKADERKREHDIIYERKLTKERSKEDHLFADKEKFVTGAYKKKLEEQQRWAREQALRDLRDERDDVTKK 602 R K E + +KA AEDP +FDYDG YDE++ K+ +++ +AD + KY +I R+ E ER+ +ER KE F DKE FVTGAY+K+ EE ++ ++A ++ V K+ Sbjct: 51 RVQKAAEREHQKAEAEDPTIFDYDGNYDEIQAIKNEKKEEARKADKNRESKYAENIIKAHARRQLEQFSREERQQLREREKEGDEFDDKEVFVTGAYRKQQEEVKKHREQEAEEAAFNDMTSVQKQ 176 The following BLAST results are available for this feature:
BLAST of FC869096 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC869096 ID=FC869096; Name=FC869096; organism=Citrus clementina; type=EST; length=636bpback to top |