FC869144
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC869144 vs. ExPASy Swiss-Prot
Match: CSK2E_ARATH (Putative casein kinase II subunit beta-4 OS=Arabidopsis thaliana GN=At2g44680 PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 8.290e-37 Identity = 82/148 (55.41%), Postives = 96/148 (64.86%), Query Frame = 3 Query: 252 MYRDR-------GGGASKSEIVAGPLDRKRINDALDKHLEKTSPSTSRALSSKDKERLSVPSTSAGKSQLDHRDSRSASLPKNKCXXXXXXXXXXXXXXXXXXXXXXXWISWFCNLRGNEFFCEVDDEYIQDDFYLCGVSSQAPYYDY 674 MY+DR GGG+S+SEI+ G +DRKRINDALDKHL+K+SPSTSR +SKDK+ SVPSTS KSQL R S ++ WISWFCNLRGNEFFCEVD++YIQDDF LCG+S Q PYYDY Sbjct: 1 MYKDRSGGGIMGGGGSSRSEILGGAIDRKRINDALDKHLKKSSPSTSRVFTSKDKD--SVPSTSTAKSQLHSRSPDVESDTDSE-----------GSDVSGSEGDDTSWISWFCNLRGNEFFCEVDEDYIQDDFNLCGLSGQVPYYDY 135
BLAST of FC869144 vs. ExPASy Swiss-Prot
Match: CSK2D_ARATH (Casein kinase II subunit beta-3 OS=Arabidopsis thaliana GN=CKB3 PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 8.877e-31 Identity = 75/147 (51.02%), Postives = 92/147 (62.59%), Query Frame = 3 Query: 252 MYRDR----GGGASKSEIVAGPLDRKRINDALDKHLEK--TSPSTSRALSSKDKERLSVPSTSAGKSQLDHRDSRSASLPKNKCXXXXXXXXXXXXXXXXXXXXXXXWISWFCNLRGNEFFCEVDDEYIQDDFYLCGVSSQAPYYDY 674 MY++R GGG+S+SEI+ G +DRKRINDAL+K LEK TS +TSR SSKDK+ S ST K+QL +S + S + WISWFCNLRGN+FFCEVD++YIQDDF LCG+S Q PYYDY Sbjct: 1 MYKERSGGGGGGSSRSEILGGAIDRKRINDALNKKLEKSSTSTTTSRVFSSKDKDPFSFTST---KTQLPDVESETDSEGSD---------------VSGSEGDDTSWISWFCNLRGNDFFCEVDEDYIQDDFNLCGLSGQVPYYDY 129
BLAST of FC869144 vs. ExPASy Swiss-Prot
Match: CSK2B_ARATH (Casein kinase II subunit beta OS=Arabidopsis thaliana GN=CKB1 PE=1 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.583e-30 Identity = 77/148 (52.03%), Postives = 91/148 (61.49%), Query Frame = 3 Query: 252 MYRDRGGGASKSEIVAGPLDRKRINDALDKHLEKTSPSTSRALSSKDKERLSVPSTSA---GKSQ---LDHRDSRSASLPKNKCXXXXXXXXXXXXXXXXXXXXXXX-WISWFCNLRGNEFFCEVDDEYIQDDFYLCGVSSQAPYYDY 674 MYRDRG S+ E+V DRKRINDAL E+ SPSTSR ++ K K ++ +T+A GK Q ++HRDSRSASL KN WISWFCNLRGNEFFCEVDD+YIQDDF LCG+SS PYY+Y Sbjct: 1 MYRDRGTVNSRPEVV----DRKRINDAL----ERPSPSTSRQVNGKGKGTVTAATTTANLIGKQQSNNINHRDSRSASLSKNNTVSDDESDTDSEESDVSGSDGEDTSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSLVPYYEY 140
BLAST of FC869144 vs. ExPASy Swiss-Prot
Match: CSK2C_ARATH (Casein kinase II subunit beta' OS=Arabidopsis thaliana GN=CKB2 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.766e-24 Identity = 67/144 (46.53%), Postives = 77/144 (53.47%), Query Frame = 3 Query: 252 MYRDRGGGASKSEIVAGPLDRKRINDALDKHLEKTSPSTSRALSSKDKERLSVPSTSAGKSQL-DHRDSRSASLPKNKCXXXXXXXXXXXXXXXXXXXXXXX--WISWFCNLRGNEFFCEVDDEYIQDDFYLCGVSSQAPYYDY 674 MYR+RG SKSE+V DRKRIN+ D PS S + K +++ S GK QL D SRS S+ K WISWFCNLRGNEFFCEVDD+YIQDDF LCG+S Q PYYDY Sbjct: 1 MYRERGMVGSKSEVV----DRKRINEIHDNR-----PSHSMSQPVNGKGKVTSTSVLMGKQQLHDKESSRSGSISKTNISDAVDISDTDSEESEVSGSDGEDTSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSHQVPYYDY 135
BLAST of FC869144 vs. ExPASy Swiss-Prot
Match: CSK2B_XENLA (Casein kinase II subunit beta OS=Xenopus laevis GN=csnk2b PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.056e-11 Identity = 27/38 (71.05%), Postives = 32/38 (84.21%), Query Frame = 3 Query: 555 WISWFCNLRGNEFFCEVDDEYIQDDFYLCGVSSQAPYY 668 WISWFC LRGNEFFCEVD++YIQD F L G++ Q P+Y Sbjct: 9 WISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHY 46
BLAST of FC869144 vs. ExPASy Swiss-Prot
Match: CSK2B_RAT (Casein kinase II subunit beta OS=Rattus norvegicus GN=Csnk2b PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.056e-11 Identity = 27/38 (71.05%), Postives = 32/38 (84.21%), Query Frame = 3 Query: 555 WISWFCNLRGNEFFCEVDDEYIQDDFYLCGVSSQAPYY 668 WISWFC LRGNEFFCEVD++YIQD F L G++ Q P+Y Sbjct: 9 WISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHY 46
BLAST of FC869144 vs. ExPASy Swiss-Prot
Match: CSK2B_RABIT (Casein kinase II subunit beta OS=Oryctolagus cuniculus GN=CSNK2B PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.056e-11 Identity = 27/38 (71.05%), Postives = 32/38 (84.21%), Query Frame = 3 Query: 555 WISWFCNLRGNEFFCEVDDEYIQDDFYLCGVSSQAPYY 668 WISWFC LRGNEFFCEVD++YIQD F L G++ Q P+Y Sbjct: 9 WISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHY 46
BLAST of FC869144 vs. ExPASy Swiss-Prot
Match: CSK2B_PIG (Casein kinase II subunit beta OS=Sus scrofa GN=CSNK2B PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.056e-11 Identity = 27/38 (71.05%), Postives = 32/38 (84.21%), Query Frame = 3 Query: 555 WISWFCNLRGNEFFCEVDDEYIQDDFYLCGVSSQAPYY 668 WISWFC LRGNEFFCEVD++YIQD F L G++ Q P+Y Sbjct: 9 WISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHY 46
BLAST of FC869144 vs. ExPASy Swiss-Prot
Match: CSK2B_MOUSE (Casein kinase II subunit beta OS=Mus musculus GN=Csnk2b PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.056e-11 Identity = 27/38 (71.05%), Postives = 32/38 (84.21%), Query Frame = 3 Query: 555 WISWFCNLRGNEFFCEVDDEYIQDDFYLCGVSSQAPYY 668 WISWFC LRGNEFFCEVD++YIQD F L G++ Q P+Y Sbjct: 9 WISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHY 46
BLAST of FC869144 vs. ExPASy Swiss-Prot
Match: CSK2B_HUMAN (Casein kinase II subunit beta OS=Homo sapiens GN=CSNK2B PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.056e-11 Identity = 27/38 (71.05%), Postives = 32/38 (84.21%), Query Frame = 3 Query: 555 WISWFCNLRGNEFFCEVDDEYIQDDFYLCGVSSQAPYY 668 WISWFC LRGNEFFCEVD++YIQD F L G++ Q P+Y Sbjct: 9 WISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHY 46 The following BLAST results are available for this feature:
BLAST of FC869144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869144 ID=FC869144; Name=FC869144; organism=Citrus clementina; type=EST; length=674bpback to top |