FC869190
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC869190 vs. ExPASy Swiss-Prot
Match: TOCC_ARATH (Tocopherol cyclase, chloroplastic OS=Arabidopsis thaliana GN=VTE1 PE=1 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 1.701e-39 Identity = 81/131 (61.83%), Postives = 97/131 (74.05%), Query Frame = 1 Query: 127 RTVEHLDSTLRPLLYTKR--RHFNRVLVLASSAQT-VGGVSVNPVYKPTPRNRELRTPHSGYHFDGSTRRFFEGWYFRVSIPERKQSFCIIYSVENPAFKKKLSSLEVAQHGPRFTGVGVQILGADDKYMC 510 R V L +L P TK R +RV S+ + +SV PVY PT NRELRTPHSGYHFDG+ R+FFEGWYFRVSIPE+++SFC +YSVENPAF++ LS LEVA +GPRFTGVG QILGA+DKY+C Sbjct: 21 RPVSPLTRSLVPFRSTKLVPRSISRVSASISTPNSETDKISVKPVYVPTSPNRELRTPHSGYHFDGTPRKFFEGWYFRVSIPEKRESFCFMYSVENPAFRQSLSPLEVALYGPRFTGVGAQILGANDKYLC 151
BLAST of FC869190 vs. ExPASy Swiss-Prot
Match: TOCC_MAIZE (Probable tocopherol cyclase, chloroplastic OS=Zea mays GN=SDX1 PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 2.152e-34 Identity = 67/118 (56.78%), Postives = 86/118 (72.88%), Query Frame = 1 Query: 172 TKRRHFNRVLVLASSAQTVGG-----VSVNPVYKPTPRNRELRTPHSGYHFDGSTRRFFEGWYFRVSIPERKQSFCIIYSVENPAFKKKLSSLEVAQHGPRFTGVGVQILGADDKYMC 510 + RRH R +V +++ +V + P+Y PTP++R LRTPHSGYHFDG+ R FFEGWYF+VSIPE +QSFC +YSVENP F+ +S L+ + PRFTGVG QILGADDKY+C Sbjct: 23 SSRRHCPRGVVPRAASSSVSSFTSPSAAAAPIYTPTPQDRSLRTPHSGYHFDGTARPFFEGWYFKVSIPECRQSFCFMYSVENPLFRDGMSDLDKLLYRPRFTGVGAQILGADDKYIC 140 The following BLAST results are available for this feature:
BLAST of FC869190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC869190 ID=FC869190; Name=FC869190; organism=Citrus clementina; type=EST; length=512bpback to top |