FC870626

Overview
NameFC870626
Unique NameFC870626
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length499
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC870626 vs. ExPASy Swiss-Prot
Match: RL72_ARATH (60S ribosomal protein L7-2 OS=Arabidopsis thaliana GN=RPL7B PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 6.319e-12
Identity = 32/46 (69.57%), Postives = 34/46 (73.91%), Query Frame = 3 
Query:    3 EANNFLWPFXXXXXXXXXXXXRNHYVEGGDAGNREDYINELIRRMN 140
            EANNFLWPF            RNHYVEGGDAGNRE++INELIRRMN
Sbjct:  197 EANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELIRRMN 242
[Close]
BLAST of FC870626 vs. ExPASy Swiss-Prot
Match: RL74_ARATH (60S ribosomal protein L7-4 OS=Arabidopsis thaliana GN=RPL7D PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 8.253e-12
Identity = 31/46 (67.39%), Postives = 34/46 (73.91%), Query Frame = 3 
Query:    3 EANNFLWPFXXXXXXXXXXXXRNHYVEGGDAGNREDYINELIRRMN 140
            EANNFLWPF            RNHYVEGGDAGNRE++INEL+RRMN
Sbjct:  199 EANNFLWPFQLKAPLGGMKKKRNHYVEGGDAGNRENFINELVRRMN 244
[Close]
BLAST of FC870626 vs. ExPASy Swiss-Prot
Match: RL73_ARATH (60S ribosomal protein L7-3 OS=Arabidopsis thaliana GN=RPL7C PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 8.253e-12
Identity = 31/46 (67.39%), Postives = 34/46 (73.91%), Query Frame = 3 
Query:    3 EANNFLWPFXXXXXXXXXXXXRNHYVEGGDAGNREDYINELIRRMN 140
            EANNFLWPF            RNHYVEGGDAGNRE++INEL+RRMN
Sbjct:  197 EANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELVRRMN 242
The following BLAST results are available for this feature:
BLAST of FC870626 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
RL72_ARATH6.319e-1269.5760S ribosomal protein L7-2 OS=Arabidopsis thaliana... [more]
RL74_ARATH8.253e-1267.3960S ribosomal protein L7-4 OS=Arabidopsis thaliana... [more]
RL73_ARATH8.253e-1267.3960S ribosomal protein L7-3 OS=Arabidopsis thaliana... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAA3DC06ZM1 AbsAOv1 Citrus clementina cDNA clone KN0AAA3DC06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC870626 ID=FC870626; Name=FC870626; organism=Citrus clementina; type=EST; length=499bp
GGGAGGCAAACAACTTCCTATGGCCCTTCAAGCTCAAGGCACCATTGGGT
GGCCTGAAGAAGAAGAGGAACCACTATGTTGAAGGCGGTGATGCAGGAAA
CCGTGAAGATTACATCAATGAGCTCATCAGAAGGATGAACTAGGCTTCTG
CAGAATATCCTACCCCTTTTGAAGAAGTTTTGATGTGATCAATATCTTAA
ATTTTGGCTTTTAGTGTTTCCTATTATTCCCAGCCTTTTCCCTGGAAGTT
AAGTAGAAACTTTCTTACTTTTTATAACAGTGACAGTGTTGTTATTTTGG
CTTCAGACTGGATTATCATTCCAAATTTTATTTTTTGTTTTCATGTGTTT
TAGTTTCAGTTATGAAAGTGGCGGATCTGTTTTTAATTTGATGGTACTAC
TATCAAATTTTCTGAGCTGACGTTGCGCATTCATGCTTCTATTACACAGC
ACGCCATTCTCCTTCGCATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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