FC870627
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC870627 vs. ExPASy Swiss-Prot
Match: TRXL6_ARATH (Thioredoxin-like 6, chloroplastic OS=Arabidopsis thaliana GN=At4g29670 PE=2 SV=2) HSP 1 Score: 223.787 bits (569), Expect = 9.922e-58 Identity = 104/143 (72.73%), Postives = 122/143 (85.31%), Query Frame = 2 Query: 251 PRKRLISFKVHATLAETNQPKWWERNAPNMIDIHSTQEFLKALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDENKPMCKSLNVKVLPYFHFYRGAHGQLESFSCSLAKFQKIKEAIALHNTDRCSIG 679 P+ +++ KV +AET PKWWERNAPNM+DIHST+EFL ALS AG+RLVIVEFYGTWCASCRALFPKLC+TA EHP+IVFLKVNFDENKPMCKSLNV+VLP+FHFYRGA GQLESFSCSLA K+K+AI++ + +G Sbjct: 76 PKSQVVRVKVDENVAETEPPKWWERNAPNMVDIHSTEEFLSALSGAGERLVIVEFYGTWCASCRALFPKLCKTAVEHPDIVFLKVNFDENKPMCKSLNVRVLPFFHFYRGADGQLESFSCSLA---KVKKAISVSPFPQLELG 215
BLAST of FC870627 vs. ExPASy Swiss-Prot
Match: TRXL2_ARATH (Thioredoxin-like 2, chloroplastic OS=Arabidopsis thaliana GN=At4g26160 PE=2 SV=2) HSP 1 Score: 222.246 bits (565), Expect = 2.887e-57 Identity = 111/173 (64.16%), Postives = 127/173 (73.41%), Query Frame = 2 Query: 176 ISNNKRIYPLXXXXXXXGLARFSL------TPRKRLISFKVHATLAETNQPKWWERNA-PNMIDIHSTQEFLKALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDENKPMCKSLNVKVLPYFHFYRGAHGQLESFSCSLAKFQKIKEAIALHNTDRCS 673 +S+ R Y L L SL + R + +S KV A AET QPKWWER A PNMIDI S ++FL AL AGDRLVIV+FYGTWC SCRA+FPKLC+TA+EHP I+FLKVNFDENK +CKSLNVKVLPYFHFYRGA GQ+ESFSCSLAKFQK++EAI HN S Sbjct: 34 LSSCNRFYGLSSSSSSSSLTTSSLIGNLVFSSRNQSLSVKVQALAAETEQPKWWERKAGPNMIDITSAEQFLNALKDAGDRLVIVDFYGTWCGSCRAMFPKLCKTAKEHPNILFLKVNFDENKSLCKSLNVKVLPYFHFYRGADGQVESFSCSLAKFQKLREAIERHNVGSIS 206
BLAST of FC870627 vs. ExPASy Swiss-Prot
Match: TRXL1_ARATH (Thioredoxin-like 1 OS=Arabidopsis thaliana GN=At1g08570 PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 6.258e-36 Identity = 74/178 (41.57%), Postives = 111/178 (62.36%), Query Frame = 2 Query: 257 KRLISFKVHATLAETNQPKWWERNAP-NMIDIHSTQEFLKALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDENKPMCKSLNVKVLPYFHFYRGAHGQLESFSCSLAKFQKIKEAIALHNTDRCSIGPPKGVGDLSLEGIS-------------VPLEKPAGS 748 +R + TL KWWE+ NM +I S QE + +L+ AGD+LV+V+F+ C C+AL PK+C+ AE +P++ FL+VN++E+K MC SL V VLP+F FYRG+ G++ SFSC+ A +K ++A+A H DRCS+GP KG+ + L ++ VP+EK A + Sbjct: 71 RRSSAITAQTTLRIGTAQKWWEKGLKDNMREISSAQELVDSLTNAGDKLVVVDFFSPGCGGCKALHPKICQFAEMNPDVQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGSQGRVCSFSCTNATIKKFRDALAKHGPDRCSLGPTKGLEEKELVALAANKELNFTYTPKPVPVEKEAAT 248
BLAST of FC870627 vs. ExPASy Swiss-Prot
Match: TRXL7_ARATH (Thioredoxin-like 7, chloroplastic OS=Arabidopsis thaliana GN=At2g33270 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 1.180e-34 Identity = 67/157 (42.68%), Postives = 107/157 (68.15%), Query Frame = 2 Query: 245 LTPRKRLISF-KVHATLAETNQPKWWERNA-PNMIDIHSTQEFLKALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDENKPMCKSLNVKVLPYFHFYRGAHGQLESFSCSLAKFQKIKEAIALHNTDRCSIGPPKGVGDLSL 709 L +K++ +F + +L KWWE+ PNM + S Q+ + +L AGD+LV+V+F+ C C+AL PK+C+ AE++PE+ FL+VN++E++ +C+SLN+ VLP+F FYRG+ G++ SFSC+ A +K KEA+ H ++CSIG KG+ + L Sbjct: 62 LFSKKKIPAFVRCQTSLGIGRNQKWWEKELKPNMKSVTSPQDLVVSLRNAGDKLVVVDFFSPSCGGCKALHPKICKIAEKNPEVEFLQVNYEEHRSLCQSLNIHVLPFFRFYRGSSGRVCSFSCTNATIRKFKEALEKHGREQCSIGETKGLEEKEL 218
BLAST of FC870627 vs. ExPASy Swiss-Prot
Match: TRXL3_ARATH (Thioredoxin-like 3, chloroplastic OS=Arabidopsis thaliana GN=At5g61440 PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.907e-33 Identity = 62/138 (44.93%), Postives = 95/138 (68.84%), Query Frame = 2 Query: 311 KWWERNAP-NMIDIHSTQEFLKALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDENKPMCKSLNVKVLPYFHFYRGAHGQLESFSCSLAKFQKIKEAIALHNTDRCSIGPPKGVGDLSLEGIS 721 +WWE++ NM++I S + +L AGDRLV+++FY C C++L PK+C+ AE +P ++FLKVN +E + MC LNV VLP+F FYRGA G++ SFSC++A K K+A+ H ++RCS+G KG+ + L ++ Sbjct: 77 RWWEKSTNHNMLEIQSANHLVDSLLNAGDRLVVLDFYSPGCGGCKSLHPKICQLAETNPNVMFLKVNQEELRTMCHGLNVHVLPFFKFYRGAEGKVCSFSCTIATINKFKKALDKHGSERCSLGDAKGLDEKELAALA 214
BLAST of FC870627 vs. ExPASy Swiss-Prot
Match: THIO_GEOCY (Thioredoxin OS=Geodia cydonium GN=THIO PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.404e-11 Identity = 27/72 (37.50%), Postives = 47/72 (65.28%), Query Frame = 2 Query: 362 EFLKALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDENKPMCKSLNVKVLPYFHFYR 577 +F +AL AGD+LV+++F +WC C+ + PK A+E P+++F KV+ DEN ++ ++ +P F FY+ Sbjct: 10 DFDQALKDAGDKLVVIDFTASWCGPCQRIAPKYVEMAKEFPDVIFYKVDVDENDETAEAEKIQAMPTFKFYK 81
BLAST of FC870627 vs. ExPASy Swiss-Prot
Match: THIO_ICTPU (Thioredoxin OS=Ictalurus punctatus GN=txn PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.335e-11 Identity = 36/108 (33.33%), Postives = 61/108 (56.48%), Query Frame = 2 Query: 338 MIDIHSTQEFLKALSQAGDRLVIVEFYGTWCASCRALFP--KLCRTAEEHPEIVFLKVNFDENKPMCKSLNVKVLPYFHFYRGAHGQLESFSCSLAKFQKIKEAIALH 655 ++ I + F AL AGD+LV+V+F TWC C+ + P + +E++ +VFLKV+ D+ + ++K +P FHFY+ +++ FS A Q +K+ I H Sbjct: 2 VVHIENLNAFSAALKNAGDKLVVVDFTATWCGPCQKIGPIFETLSKSEDYQNVVFLKVDVDDAADVSSHCDIKCMPTFHFYKNGQ-KIDEFSG--ANEQTLKQKINDH 106
BLAST of FC870627 vs. ExPASy Swiss-Prot
Match: THIO_OPHHA (Thioredoxin OS=Ophiophagus hannah GN=TXN PE=3 SV=3) HSP 1 Score: 67.781 bits (164), Expect = 9.100e-11 Identity = 32/95 (33.68%), Postives = 58/95 (61.05%), Query Frame = 2 Query: 362 EFLKALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDENKPMCKSLNVKVLPYFHFYRGAHGQLESFSCSLAKFQKIKEAI 646 EF LS AG +L++V+F TWC C+ + P E++P++VF++++ D+ + + +VK +P F FY+ + ++ FS A +K++EAI Sbjct: 10 EFRAELSNAGSKLIVVDFSATWCGPCKMIKPFFHSMVEKYPDVVFIEIDVDDAQDVASHCDVKCMPTFQFYKN-NEKVHEFSG--ANKEKLEEAI 101 The following BLAST results are available for this feature:
BLAST of FC870627 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC870627 ID=FC870627; Name=FC870627; organism=Citrus clementina; type=EST; length=864bpback to top |