FC872024
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872024 vs. ExPASy Swiss-Prot
Match: ARPC3_HUMAN (Actin-related protein 2/3 complex subunit 3 OS=Homo sapiens GN=ARPC3 PE=1 SV=3) HSP 1 Score: 140.584 bits (353), Expect = 9.991e-33 Identity = 66/146 (45.21%), Postives = 97/146 (66.44%), Query Frame = 3 Query: 225 KKPYKGSCPCF*SRTDIVDEAITFFRANVFFINFDIKSSADKLLIYLTFYINVALKRLEGRKTLAEGTKAIINLGLEKVPVPGEPNFPFPGLFALPQSQKEAELFRNYLKQIKEETSGRLLSVAYRP-NGTPNKWWLAFAKRKFMN 659 + +KG P TDIVDEAI +F+ANVFF N++IK+ AD+ LIY+T YI+ LK+L+ + ++G K + LG+ P+PGEP FP ++A P +++E E+ R YL+Q+++ET RL + P N P+KWW F KR+FMN Sbjct: 25 RSQFKGPAPRETKDTDIVDEAIYYFKANVFFKNYEIKNEADRTLIYITLYISECLKKLQKCNSKSQGEKEMYTLGITNFPIPGEPGFPLNAIYAKPANKQEDEVMRAYLQQLRQETGLRLCEKVFDPQNDKPSKWWTCFVKRQFMN 170
BLAST of FC872024 vs. ExPASy Swiss-Prot
Match: ARPC3_BOVIN (Actin-related protein 2/3 complex subunit 3 OS=Bos taurus GN=ARPC3 PE=1 SV=3) HSP 1 Score: 140.584 bits (353), Expect = 9.991e-33 Identity = 66/146 (45.21%), Postives = 97/146 (66.44%), Query Frame = 3 Query: 225 KKPYKGSCPCF*SRTDIVDEAITFFRANVFFINFDIKSSADKLLIYLTFYINVALKRLEGRKTLAEGTKAIINLGLEKVPVPGEPNFPFPGLFALPQSQKEAELFRNYLKQIKEETSGRLLSVAYRP-NGTPNKWWLAFAKRKFMN 659 + +KG P TDIVDEAI +F+ANVFF N++IK+ AD+ LIY+T YI+ LK+L+ + ++G K + LG+ P+PGEP FP ++A P +++E E+ R YL+Q+++ET RL + P N P+KWW F KR+FMN Sbjct: 25 RSQFKGPAPRETKDTDIVDEAIYYFKANVFFKNYEIKNEADRTLIYITLYISECLKKLQKCNSKSQGEKEMYTLGITNFPIPGEPGFPLNAIYAKPANKQEDEVMRAYLQQLRQETGLRLCEKVFDPQNDKPSKWWTCFVKRQFMN 170
BLAST of FC872024 vs. ExPASy Swiss-Prot
Match: ARPC3_MOUSE (Actin-related protein 2/3 complex subunit 3 OS=Mus musculus GN=Arpc3 PE=1 SV=3) HSP 1 Score: 140.198 bits (352), Expect = 1.305e-32 Identity = 66/146 (45.21%), Postives = 97/146 (66.44%), Query Frame = 3 Query: 225 KKPYKGSCPCF*SRTDIVDEAITFFRANVFFINFDIKSSADKLLIYLTFYINVALKRLEGRKTLAEGTKAIINLGLEKVPVPGEPNFPFPGLFALPQSQKEAELFRNYLKQIKEETSGRLLSVAYRP-NGTPNKWWLAFAKRKFMN 659 + +KG P TDIVDEAI +F+ANVFF N++IK+ AD+ LIY+T YI+ LK+L+ + ++G K + LG+ P+PGEP FP ++A P S++E E+ R YL+Q+++ET RL + P + P+KWW F KR+FMN Sbjct: 25 RSQFKGPAPRETKDTDIVDEAIYYFKANVFFKNYEIKNEADRTLIYITLYISECLKKLQKCNSKSQGEKEMYTLGITNFPIPGEPGFPLNAIYAKPASKQEDEMMRAYLQQLRQETGLRLCEKVFDPQSDKPSKWWTCFVKRQFMN 170
BLAST of FC872024 vs. ExPASy Swiss-Prot
Match: ARPC3_CAEEL (Probable actin-related protein 2/3 complex subunit 3 OS=Caenorhabditis elegans GN=arx-5 PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.113e-26 Identity = 59/144 (40.97%), Postives = 90/144 (62.50%), Query Frame = 3 Query: 234 YKGSCPCF*SRTDIVDEAITFFRANVFFINFDIKSSADKLLIYLTFYINVALKRLEGRKTLAEGTKAIINLGLEK-VPVPGEPNFPFPGLFALPQSQKEAELFRNYLKQIKEETSGRLLSVAY-RPNGTPNKWWLAFAKRKFMN 659 +KG P ++ DI+DEA+T+F+ N+FF F+IK AD+ +IYL FYI L++L+ G K + L L +P+PGE FP ++ PQS+ + + R YL+QI++E RL +A+ P P+KWWL FA+R+FM+ Sbjct: 31 FKGPAPQT-NQDDIIDEALTYFKPNIFFREFEIKGPADRTMIYLIFYITECLRKLQKSPNKIAGQKDLHALALSHLLPIPGENGFPLNSMYKAPQSKPDEDEMRAYLQQIRQEIGARLCDLAFPDPQDRPSKWWLCFARRRFMD 173
BLAST of FC872024 vs. ExPASy Swiss-Prot
Match: ARPC3_SCHPO (Actin-related protein 2/3 complex subunit 3 OS=Schizosaccharomyces pombe GN=arc3 PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.001e-24 Identity = 63/149 (42.28%), Postives = 87/149 (58.39%), Query Frame = 3 Query: 216 TSFKKPYKGSCPCF*SRTDIVDEAITFFRANVFFINFDIKSSADKLLIYLTFYINVALKRLEGRKTLAEGTKAIINLGLEKVPVPGEPNFPFPGLFALPQSQKEAELFRNYLKQIKEETSGRLLSVAY-RPNGTPNKWWLAFAKRKFMN 659 T F+ P + P S+ DI+DE I FRAN FF NF+IK AD+ LIY T +I+ L R+ G + + + +L LE +PG FP L+A P S ++AE+ R YL Q ++E + RLLS Y P+KWW F+KR+FMN Sbjct: 27 TKFRGP---AYPADESQMDIIDECIGLFRANCFFRNFEIKGPADRTLIYGTLFISECLGRVNG-LNYRDAERQLNSLALENFSIPGSAGFPLNALYAPPLSPQDAEIMRTYLTQFRQELAYRLLSHVYATEKDHPSKWWTCFSKRRFMN 171
BLAST of FC872024 vs. ExPASy Swiss-Prot
Match: ARPC3_YEAST (Actin-related protein 2/3 complex subunit 3 OS=Saccharomyces cerevisiae GN=ARC18 PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.026e-23 Identity = 53/134 (39.55%), Postives = 80/134 (59.70%), Query Frame = 3 Query: 270 DIVDEAITFFRANVFFINFDIKSSADKLLIYLTFYINVALKRLEGRKTLAEGTKAIINLGLEKVPVPGEPNFPFPGLFALP-QSQKEAELFRNYLKQIKEETSGRLLSVAYRPNGT---PNKWWLAFAKRKFMN 659 DI+DE + FRAN FF NF+IKS AD++LIY +IN L L+ + E K + N+ L+ +PG P FP ++ +P Q +L + Y++Q ++E + RLL Y + P+K+WLAF +R+FMN Sbjct: 42 DIIDECLDLFRANSFFKNFEIKSPADRVLIYGILFINDCLAHLKITTSFNEAVKVLTNVALDNFTLPGTPGFPLNNVYQVPVQDHNSMDLLKTYIQQFRQELAMRLLERVYSSTDSKEYPSKFWLAFTRRRFMN 175 HSP 2 Score: 25.0238 bits (53), Expect = 1.026e-23 Identity = 13/37 (35.14%), Postives = 20/37 (54.05%), Query Frame = 1 Query: 160 YHSSFVDEEGVTKACG-CPLLPLKSHIKGPAPASDQE 267 YHS+F + + G LLPL + +GPA S+ + Sbjct: 4 YHSTFPVDPNTDRMVGNFALLPLNTKFRGPAYPSNSD 40
BLAST of FC872024 vs. ExPASy Swiss-Prot
Match: ARPC3_DICDI (Actin-related protein 2/3 complex subunit 3 OS=Dictyostelium discoideum GN=arcC PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.088e-22 Identity = 55/153 (35.95%), Postives = 86/153 (56.21%), Query Frame = 3 Query: 207 LPFTSFKKPYKGSCPCF*SRT-DIVDEAITFFRANVFFINFDIKSSADKLLIYLTFYINVALKRLEGRKTLAEGTKAIINLGLEKVPVPGEPNFPFPGLFALPQSQKEAELFRNYLKQIKEETSGRLLSVAYRPN-GTPNKWWLAFAKRKFMN 659 +P K +KG P + + DI+DEA+ F+AN+ F NF+++ + D++LIYLT YI L ++ A+ KA+ + E+ +PGE FP GL +P ++ A+ R Y Q++ E RL Y + NKWW+ F+KRKF+N Sbjct: 20 VPILPLKTTHKGPAPKGDANSVDIIDEALDLFKANILFRNFEVQGNGDRVLIYLTLYITKCLLKI-APMNKADAEKALFLIAQEQFSIPGESAFPLGGLVTVPNTRDAADTLRQYFTQLRLELGVRLCQRVYAVDPSKANKWWICFSKRKFLN 171 The following BLAST results are available for this feature:
BLAST of FC872024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872024 ID=FC872024; Name=FC872024; organism=Citrus clementina; type=EST; length=810bpback to top |