FC872390
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBC21_ARATH (Probable ubiquitin carrier protein E2 21 OS=Arabidopsis thaliana GN=UBC21 PE=1 SV=1) HSP 1 Score: 301.982 bits (772), Expect = 2.509e-81 Identity = 141/150 (94.00%), Postives = 147/150 (98.00%), Query Frame = 2 Query: 11 LFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAMPKKG 460 LFKEYKEVQREK ADPDIQL+CDD+NIFKWTALIKGPS+TPYEGGVFQLAF+VPE YPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGD+RGF SMA+MYTRLAAMPKKG Sbjct: 8 LFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMPKKG 157
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBCX_DICDI (Ubiquitin-conjugating enzyme E2 pex4 OS=Dictyostelium discoideum GN=pex4 PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 3.307e-49 Identity = 88/143 (61.54%), Postives = 115/143 (80.42%), Query Frame = 2 Query: 11 LFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRL 439 L KEYK +Q E+ D + D+S++++W A+IKGP TPYE G F+L +VP YPLQPP ++F+TKIFHPN+HFKTGEICLD+LK +WS +TLQSVCR+IIAL++ PE DSPLNCD+GNL+R+GD++G S+ARMYTRL Sbjct: 5 LMKEYKVLQNEEFEDI-LLYPRDESDLYRWVAIIKGPPDTPYENGKFELDISVPTNYPLQPPTIKFVTKIFHPNIHFKTGEICLDLLKTSWSAIYTLQSVCRSIIALLSLPEADSPLNCDAGNLIRNGDVKGHDSLARMYTRL 146
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBC16_SCHPO (Ubiquitin-conjugating enzyme E2 16 OS=Schizosaccharomyces pombe GN=ubc16 PE=2 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 2.153e-32 Identity = 69/148 (46.62%), Postives = 93/148 (62.84%), Query Frame = 2 Query: 11 LFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAMPK 454 L KEY Q + + D ++F W A+I+GP++TPYEGG + L V E YP+ PP V F TKI HPN+ + GE+C+DILK WSPAW+LQS C AII+L+++ + SPLN D+ LLR+GD + S+ R T L A K Sbjct: 8 LHKEYASFQAGDISGLLLLKPVTDVDMFHWKAVIEGPTETPYEGGQWVLDIHVHEGYPISPPSVYFQTKIVHPNISWTNGEVCMDILKTHWSPAWSLQSACLAIISLLSNYDASSPLNVDAAKLLRTGDKTAYNSLVRCTTYLYAKGK 155
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBCX_PICAN (Ubiquitin-conjugating enzyme E2-21 kDa OS=Pichia angusta GN=PEX4 PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.306e-29 Identity = 65/169 (38.46%), Postives = 97/169 (57.40%), Query Frame = 2 Query: 11 LFKEYKEVQREKSADPD-------IQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLT----------------------KIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMY 430 L KEY+ V++E + + L + +F+W+A+I+GP ++P+E +++L +P YPL PP+++F+ K+ HPNV+FKTGEICLDIL+ WSPAWTLQS AI+ L+A+PEP SPLN D NLL+ D ++ + Y Sbjct: 8 LLKEYRAVKKELTEKRSPIHDTGIVDLHPLEDGLFRWSAVIRGPDQSPFEDALWKLEIDIPTNYPLDPPKIKFVVFGEEKIRQLQRKTSSGARKVCYKMPHPNVNFKTGEICLDILQQKWSPAWTLQSALVAIVVLLANPEPLSPLNIDMANLLKCDDTTAYKDLVHYY 176
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBE2N_RAT (Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus GN=Ube2n PE=1 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.710e-26 Identity = 64/142 (45.07%), Postives = 91/142 (64.08%), Query Frame = 2 Query: 26 KEVQREKSAD-PDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAM 448 KE QR + P I+ D+SN + +I GP +P+EGG F+L +PE+YP+ P+VRF+TKI+HPNV K G ICLDILK+ WSPA +++V +I AL++ P PD PL D +S + + ++ AR +TRL AM Sbjct: 10 KETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVD-KLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKSNEAQAIET-ARAWTRLYAM 149
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.710e-26 Identity = 60/146 (41.10%), Postives = 88/146 (60.27%), Query Frame = 2 Query: 11 LFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAM 448 + KE K++Q++ V +D +F W A I GPS++PY GGVF + P YP +PP+V F TK+FHPN++ G ICLDILK WSPA T+ V +I +L+ P PD PL + ++ ++ D ++S AR +T+ AM Sbjct: 6 ILKELKDLQKDPPTSCSAGPVAED--MFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKT-DKNKYESTARSWTQKYAM 147
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBE2N_MACFA (Ubiquitin-conjugating enzyme E2 N OS=Macaca fascicularis GN=UBE2N PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.763e-26 Identity = 63/142 (44.37%), Postives = 92/142 (64.79%), Query Frame = 2 Query: 26 KEVQREKSAD-PDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAM 448 KE QR + P I+ D+SN + +I GP +P+EGG F+L +PE+YP+ P+VRF+TKI+HPNV K+G ICLDILK+ WSPA +++V +I AL++ P PD PL D ++ + + ++ AR +TRL AM Sbjct: 10 KETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVD-KSGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIET-ARAWTRLYAM 149
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBC9_ARATH (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.763e-26 Identity = 60/146 (41.10%), Postives = 87/146 (59.59%), Query Frame = 2 Query: 11 LFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAM 448 + KE K++Q++ V +D +F W A I GPS +PY GGVF + P YP +PP+V F TK+FHPN++ G ICLDILK WSPA T+ V +I +L+ P PD PL + ++ ++ D ++S AR +T+ AM Sbjct: 6 ILKELKDLQKDPPTSCSAGPVAED--MFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKT-DKNKYESTARTWTQKYAM 147
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBC28_ARATH (Ubiquitin carrier protein E2 28 OS=Arabidopsis thaliana GN=UBC28 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.763e-26 Identity = 61/146 (41.78%), Postives = 87/146 (59.59%), Query Frame = 2 Query: 11 LFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAM 448 + KE K++Q++ V +D +F W A I GPS +PY GGVF + P YP +PP+V F TK+FHPNV+ G ICLDILK WSPA T+ V +I +L+ P PD PL + ++ ++ D ++S AR +T+ AM Sbjct: 6 ILKELKDLQKDPPTSCSAGPVAED--MFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKT-DRAKYESTARSWTQKYAM 147
BLAST of FC872390 vs. ExPASy Swiss-Prot
Match: UBE2N_PONAB (Ubiquitin-conjugating enzyme E2 N OS=Pongo abelii GN=UBE2N PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.495e-25 Identity = 63/142 (44.37%), Postives = 91/142 (64.08%), Query Frame = 2 Query: 26 KEVQREKSAD-PDIQLVCDDSNIFKWTALIKGPSKTPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAM 448 KE QR + P I+ D+SN + +I GP +P+EGG F+L +PE+YP+ P+VRF+TKI+HPNV K G ICLDILK+ WSPA +++V +I AL++ P PD PL D ++ + + ++ AR +TRL AM Sbjct: 10 KETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVD-KLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIET-ARAWTRLYAM 149 The following BLAST results are available for this feature:
BLAST of FC872390 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 239
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872390 ID=FC872390; Name=FC872390; organism=Citrus clementina; type=EST; length=793bpback to top |