FC872426
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872426 vs. ExPASy Swiss-Prot
Match: LOX2_ARATH (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.227e-13 Identity = 37/68 (54.41%), Postives = 49/68 (72.06%), Query Frame = 2 Query: 5 WGEDKIIKGAFEKFQGRLMELKGIINLRNADKNLKNRHGAGSLPYELLMPLADKSGVTGKGVPYSISI 208 W + +I AFE+F+G+L L+G+I+ RN + LKNR GAG + YELL P ++ GVTG GVPYSISI Sbjct: 830 WANEPVINAAFERFKGKLQYLEGVIDERNVNITLKNRAGAGVVKYELLKPTSE-HGVTGMGVPYSISI 896
BLAST of FC872426 vs. ExPASy Swiss-Prot
Match: LOX23_HORVU (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.094e-13 Identity = 37/68 (54.41%), Postives = 49/68 (72.06%), Query Frame = 2 Query: 5 WGEDKIIKGAFEKFQGRLMELKGIINLRNADKNLKNRHGAGSLPYELLMPLADKSGVTGKGVPYSISI 208 W + ++K AFEKF GRL E +G I++RN + KNR GAG +PYELL P ++ GVTG+G+P SISI Sbjct: 830 WLAEPMVKAAFEKFSGRLKEAEGTIDMRNNNPENKNRCGAGIVPYELLKPFSE-PGVTGRGIPNSISI 896
BLAST of FC872426 vs. ExPASy Swiss-Prot
Match: LOXC1_ORYSJ (Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 2.734e-13 Identity = 35/68 (51.47%), Postives = 48/68 (70.59%), Query Frame = 2 Query: 5 WGEDKIIKGAFEKFQGRLMELKGIINLRNADKNLKNRHGAGSLPYELLMPLADKSGVTGKGVPYSISI 208 W D ++ A++ F RL E++G+I+ RN D+ LKNR GAG LPY+L+ P +D SGVTG G+P S SI Sbjct: 858 WNSDAAVQAAYDGFAARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSD-SGVTGMGIPNSTSI 924
BLAST of FC872426 vs. ExPASy Swiss-Prot
Match: LOXC2_ORYSJ (Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.357e-12 Identity = 34/68 (50.00%), Postives = 47/68 (69.12%), Query Frame = 2 Query: 5 WGEDKIIKGAFEKFQGRLMELKGIINLRNADKNLKNRHGAGSLPYELLMPLADKSGVTGKGVPYSISI 208 W D ++ A+ F RL E++G+I+ RN D+ LKNR GAG LPY+L+ P +D +GVTG G+P S SI Sbjct: 875 WNSDAAVQAAYAGFTARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSD-AGVTGMGIPNSTSI 941
BLAST of FC872426 vs. ExPASy Swiss-Prot
Match: LOX6_ARATH (Lipoxygenase 6, choloroplastic OS=Arabidopsis thaliana GN=LOX6 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.559e-11 Identity = 35/68 (51.47%), Postives = 45/68 (66.18%), Query Frame = 2 Query: 5 WGEDKIIKGAFEKFQGRLMELKGIINLRNADKNLKNRHGAGSLPYELLMPLADKSGVTGKGVPYSISI 208 W +D+ + F KF L++++ IN RN DK LKNR GAG PYELL+P GVTG+G+P SISI Sbjct: 851 WFQDEQVVKYFNKFSEELVKIEKTINERNKDKKLKNRTGAGMPPYELLLP-TSPHGVTGRGIPNSISI 917 The following BLAST results are available for this feature:
BLAST of FC872426 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872426 ID=FC872426; Name=FC872426; organism=Citrus clementina; type=EST; length=513bpback to top |