FC872490
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872490 vs. ExPASy Swiss-Prot
Match: DCS3_GOSAR ((+)-delta-cadinene synthase isozyme A OS=Gossypium arboreum GN=CAD1-A PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 9.100e-18 Identity = 52/130 (40.00%), Postives = 71/130 (54.62%), Query Frame = 3 Query: 6 TKDNFLCILKNAKSLKATDIIGRLMDDIAGYKFEQKRGHNPSAVECYKNQHGVSXXXXXXXXXXXXXNSWKDINEELLNPTTVPLPMLQRLLYFARSGHFIYDDGHDRYTH-SLMMKRQVALLLTEPLAI 392 T + F + K +KA+ II R MDDIA +KF +R + SA+ECY Q+GV+ +SWKD+NEE L PT +P P+L R L AR +Y +G D YTH K + LL +P+ I Sbjct: 427 TPETFKWAASDPKIIKASTIICRFMDDIAEHKFNHRREDDCSAIECYMKQYGVTAQEAYNEFNKHIESSWKDVNEEFLKPTEMPTPVLCRSLNLARVMDVLYREG-DGYTHVGKAAKGGITSLLIDPIQI 555
BLAST of FC872490 vs. ExPASy Swiss-Prot
Match: HUMS_ARATH (Alpha-humulene/(-)-(E)-beta-caryophyllene synthase OS=Arabidopsis thaliana GN=TPS21 PE=2 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 1.112e-15 Identity = 45/130 (34.62%), Postives = 67/130 (51.54%), Query Frame = 3 Query: 3 ATKDNFLCILKNAKSLKATDIIGRLMDDIAGYKFEQKRGHNPSAVECYKNQHGVSXXXXXXXXXXXXXNSWKDINEELLNPTTVPLPMLQRLLYFARSGHFIYDDGHDRYTHSLMMKRQVALLLTEPLAI 392 A D F + + K A++II R DDI+ Y+FE KR H + ++CY Q GVS ++WKD+N+EL+ P P P+L R+L +R Y D YT+ ++K + LL E + I Sbjct: 419 AKLDAFEWLSSHPKIRVASEIISRFTDDISSYEFEHKREHVATGIDCYMQQFGVSKERAVEVMGNIVSDAWKDLNQELMRPHVFPFPLLMRVLNLSRVIDVFY-RYQDAYTNPKLLKEHIVSLLIETIPI 547
BLAST of FC872490 vs. ExPASy Swiss-Prot
Match: DCS1_GOSAR ((+)-delta-cadinene synthase isozyme XC1 OS=Gossypium arboreum PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.453e-15 Identity = 46/130 (35.38%), Postives = 72/130 (55.38%), Query Frame = 3 Query: 6 TKDNFLCILKNAKSLKATDIIGRLMDDIAGYKFEQKRGHNPSAVECYKNQHGVSXXXXXXXXXXXXXNSWKDINEELLNPTTVPLPMLQRLLYFARSGHFIYDDGHDRYTH-SLMMKRQVALLLTEPLAI 392 T + F + K ++A+ II R MDD+A +KF+ +R + SA+ECY ++GV+ ++WKD+N+E L PT +P +L R L AR +Y +G D YT+ K + LL EP+A+ Sbjct: 426 TPETFKWAASDPKIIQASTIICRFMDDVAEHKFKHRREDDCSAIECYMEEYGVTAQEAYDVFNKHVESAWKDLNQEFLKPTEMPTEVLNRSLNLARVMDVLYREG-DGYTYVGKAAKGGITSLLIEPIAL 554
BLAST of FC872490 vs. ExPASy Swiss-Prot
Match: DCS2_GOSAR ((+)-delta-cadinene synthase isozyme XC14 OS=Gossypium arboreum PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.898e-15 Identity = 46/130 (35.38%), Postives = 72/130 (55.38%), Query Frame = 3 Query: 6 TKDNFLCILKNAKSLKATDIIGRLMDDIAGYKFEQKRGHNPSAVECYKNQHGVSXXXXXXXXXXXXXNSWKDINEELLNPTTVPLPMLQRLLYFARSGHFIYDDGHDRYTH-SLMMKRQVALLLTEPLAI 392 T + F + K ++A+ II R MDD+A +KF+ +R + SA+ECY ++GV+ ++WKD+N+E L PT +P +L R L AR +Y +G D YT+ K + LL EP+A+ Sbjct: 426 TPETFKWAANDPKIIQASTIICRFMDDVAEHKFKHRREDDCSAIECYMEEYGVTAQEAYDVFNKHVESAWKDVNKEFLKPTEMPTEVLNRSLNLARVMDVLYREG-DGYTYVGKAAKGGITSLLIEPVAL 554
BLAST of FC872490 vs. ExPASy Swiss-Prot
Match: DCS4_GOSAR ((+)-delta-cadinene synthase isozyme C2 OS=Gossypium arboreum GN=CAD1-C2 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.478e-15 Identity = 46/130 (35.38%), Postives = 71/130 (54.62%), Query Frame = 3 Query: 6 TKDNFLCILKNAKSLKATDIIGRLMDDIAGYKFEQKRGHNPSAVECYKNQHGVSXXXXXXXXXXXXXNSWKDINEELLNPTTVPLPMLQRLLYFARSGHFIYDDGHDRYTH-SLMMKRQVALLLTEPLAI 392 T + F + K ++A+ II R MDD+A +KF+ +R + SA+ECY ++GVS ++WKD+N+E PT +P +L R L AR +Y +G D YT+ K + LL EP+A+ Sbjct: 426 TPETFKWAANDPKIIQASTIICRFMDDVAEHKFKHRREDDCSAIECYMEEYGVSAQEAYDVFNKHVESAWKDVNQEFQKPTEMPTEVLNRSLNLARVMDVLYREG-DGYTYVGKAAKGGITSLLIEPIAL 554
BLAST of FC872490 vs. ExPASy Swiss-Prot
Match: DCS1_GOSHI ((+)-delta-cadinene synthase OS=Gossypium hirsutum GN=CDN1 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.098e-14 Identity = 44/130 (33.85%), Postives = 70/130 (53.85%), Query Frame = 3 Query: 6 TKDNFLCILKNAKSLKATDIIGRLMDDIAGYKFEQKRGHNPSAVECYKNQHGVSXXXXXXXXXXXXXNSWKDINEELLNPTTVPLPMLQRLLYFARSGHFIYDDGHDRYTH-SLMMKRQVALLLTEPLAI 392 T + F + K ++A+ II R MDD+ +KF+ +R + SA+ECY ++GV+ ++WKD+N+ L PT +P +L R L AR +Y +G D YT+ K + LL EP+A+ Sbjct: 426 TPETFKWAANDPKIIQASTIICRFMDDVTEHKFKHRREDDCSAIECYMEEYGVTAQEAYDVFNKHVESAWKDVNQGFLKPTEMPTEVLNRSLNLARVMDVLYREG-DGYTYVGKAAKGGITSLLIEPIAL 554
BLAST of FC872490 vs. ExPASy Swiss-Prot
Match: 5EAS_TOBAC (Aristolochene synthase OS=Nicotiana tabacum GN=EAS3 PE=1 SV=3) HSP 1 Score: 76.2554 bits (186), Expect = 1.360e-13 Identity = 46/131 (35.11%), Postives = 66/131 (50.38%), Query Frame = 3 Query: 3 ATKDNFLCILKNAKSLKATDIIGRLMDDIAGYKFEQKRGHNPSAVECYKNQHGVSXXXXXXXXXXXXXNSWKDINEELLNPTTVPLPMLQRLLYFARSGHFIYDDGHDRYTH-SLMMKRQVALLLTEPLAI 392 AT+ +F + KN K L+A+ II R++DD A Y+ E+ RG + +EC +G+S +WKDINE LL PT V L +L AR Y D YTH ++K + LL + + I Sbjct: 418 ATEQDFEWLSKNPKILEASVIICRVIDDTATYEVEKSRGQIATGIECCMRDYGISTKEAMAKFQNMAETAWKDINEGLLRPTPVSTEFLTPILNLARIVEVTYIHNLDGYTHPEKVLKPHIINLLVDSIKI 548
BLAST of FC872490 vs. ExPASy Swiss-Prot
Match: CASS_RICCO (Casbene synthase, chloroplastic OS=Ricinus communis PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.151e-12 Identity = 43/127 (33.86%), Postives = 65/127 (51.18%), Query Frame = 3 Query: 12 DNFLCILKNAKSLKATDIIGRLMDDIAGYKFEQKRGHNPSAVECYKNQHGVSXXXXXXXXXXXXXNSWKDINEELLNPTTVPLPMLQRLLYFARSGHFIYDDGHDRYTHSLMMKRQVALLLTEPLAI 392 + F + N K A+ RL++D+ + EQ+RGH S ++CY NQHGVS + WK+INEE + + V + L R++ AR Y G D YT S +K+ V L +P++I Sbjct: 476 NEFQWLETNPKLSYASGAFIRLVNDLTSHVTEQQRGHVASCIDCYMNQHGVSKDEAVKILQKMATDCWKEINEECMRQSQVSVGHLMRIVNLARLTDVSYKYG-DGYTDSQQLKQFVKGLFVDPISI 601 The following BLAST results are available for this feature:
BLAST of FC872490 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872490 ID=FC872490; Name=FC872490; organism=Citrus clementina; type=EST; length=604bpback to top |