FC872828
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872828 vs. ExPASy Swiss-Prot
Match: THD1_ARATH (Threonine dehydratase biosynthetic, chloroplastic OS=Arabidopsis thaliana GN=OMR1 PE=1 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.750e-31 Identity = 62/84 (73.81%), Postives = 72/84 (85.71%), Query Frame = 2 Query: 2 GRLSVENEVLCRFIFPERPGSLMKFLDAFSPRWNISLFHYRGQGETGANILVGIQVPENELAEFHGRANRLGYDYAVVTDDNNF 253 GR +V +EVLCRF FPERPG+LM FLD+FSPRWNI+LFHYRGQGETGAN+LVGIQVPE E+ EF RA LGYDY +V+DD+ F Sbjct: 504 GRSTVGDEVLCRFTFPERPGALMNFLDSFSPRWNITLFHYRGQGETGANVLVGIQVPEQEMEEFKNRAKALGYDYFLVSDDDYF 587
BLAST of FC872828 vs. ExPASy Swiss-Prot
Match: THD1_SOLTU (Threonine dehydratase biosynthetic (Fragment) OS=Solanum tuberosum GN=TD PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.942e-18 Identity = 41/84 (48.81%), Postives = 57/84 (67.86%), Query Frame = 2 Query: 2 GRLSVENEVLCRFIFPERPGSLMKFLDAFSPRWNISLFHYRGQGETGANILVGIQVPENELAEFHGRANRLGYDYAVVTDDNNF 253 G S+ +E+ FIFPE+ G+L FL+AFSPRWNI+L YR QG+ N+LVG QVP++E+ EF +A+ LGY Y + + F Sbjct: 270 GSASISDEIFGEFIFPEKAGTLSTFLEAFSPRWNITLCRYRDQGDINGNVLVGFQVPQSEMDEFKSQADGLGYPYELDNSNEAF 353
BLAST of FC872828 vs. ExPASy Swiss-Prot
Match: THD1_BURM1 (Threonine dehydratase biosynthetic OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=ilvA PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.041e-16 Identity = 41/69 (59.42%), Postives = 50/69 (72.46%), Query Frame = 2 Query: 20 NEVLCRFIFPERPGSLMKFLDAFSPRWNISLFHYRGQGETGANILVGIQVPENELAEFHGRANRLGYDY 226 +E L RF FPERPG+LMKFL + +P WNISLFHYR QG ++ILVG+QVP+ + AEF LGY Y Sbjct: 425 DERLFRFEFPERPGALMKFLSSMAPDWNISLFHYRNQGADYSSILVGLQVPQADHAEFERFLAALGYPY 493
BLAST of FC872828 vs. ExPASy Swiss-Prot
Match: THD1_SOLLC (Threonine dehydratase biosynthetic, chloroplastic OS=Solanum lycopersicum GN=TD PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.890e-16 Identity = 37/75 (49.33%), Postives = 53/75 (70.67%), Query Frame = 2 Query: 2 GRLSVENEVLCRFIFPERPGSLMKFLDAFSPRWNISLFHYRGQGETGANILVGIQVPENELAEFHGRANRLGYDY 226 G ++ +E+ FI PE+ +L FLDAFSPRWNI+L YR QG+ A++L+G QVP+ E+ EF +A++LGY Y Sbjct: 506 GSANISDEIFGEFIVPEKAETLKTFLDAFSPRWNITLCRYRNQGDINASLLMGFQVPQAEMDEFKNQADKLGYPY 580
BLAST of FC872828 vs. ExPASy Swiss-Prot
Match: THDH_ARXAD (Threonine dehydratase, mitochondrial OS=Arxula adeninivorans GN=ILV1 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.488e-14 Identity = 39/77 (50.65%), Postives = 49/77 (63.64%), Query Frame = 2 Query: 14 VENEVLCRFIFPERPGSLMKFLDAFSPRWNISLFHYRGQGETGANILVGIQVPENELAEFHGRANRLGYDYAVVTDD 244 V NE + RF FPERPG+L+KFL +WNI+LFHYR QG A +L GI VP +E +F + L Y YA TD+ Sbjct: 464 VTNERVFRFEFPERPGALVKFLHGVKSKWNITLFHYRNQGSDIAKVLAGISVPSHESDQFQQFLDNLEYPYAEETDN 540
BLAST of FC872828 vs. ExPASy Swiss-Prot
Match: THD1_HAEIN (Threonine dehydratase biosynthetic OS=Haemophilus influenzae GN=ilvA PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.645e-14 Identity = 38/84 (45.24%), Postives = 50/84 (59.52%), Query Frame = 2 Query: 2 GRLSVENEVLCRFIFPERPGSLMKFLDAFSPRWNISLFHYRGQGETGANILVGIQVPENELAEFHGRANRLGYDYAVVTDDNNF 253 GR + +NE L F FPE+ G+L+KFL+ RWNISLFHYR G NIL G Q+ + E AEF +L Y + VT ++ Sbjct: 425 GRAANDNERLYTFEFPEQKGALLKFLETLQNRWNISLFHYRAHGADYGNILAGFQIEQREQAEFEQGLAQLNYVFEDVTKSKSY 508
BLAST of FC872828 vs. ExPASy Swiss-Prot
Match: THDH_YEAST (Threonine dehydratase, mitochondrial OS=Saccharomyces cerevisiae GN=ILV1 PE=1 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 6.912e-12 Identity = 36/81 (44.44%), Postives = 43/81 (53.09%), Query Frame = 2 Query: 2 GRLSVENEVLCRFIFPERPGSLMKFLDAFSPRWNISLFHYRGQGETGANILVGIQVPENELAEFHGRANRLGYDYAVVTDD 244 G V NE + F FPERPG+L +FL S WN++LFHYR G +L GI VP E F LGY Y TD+ Sbjct: 487 GASKVPNERIISFEFPERPGALTRFLGGLSDSWNLTLFHYRNHGADIGKVLAGISVPPRENLTFQKFLEDLGYTYHDETDN 567 The following BLAST results are available for this feature:
BLAST of FC872828 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872828 ID=FC872828; Name=FC872828; organism=Citrus clementina; type=EST; length=776bpback to top |