FC872984
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872984 vs. ExPASy Swiss-Prot
Match: PGLR_VITVI (Probable polygalacturonase OS=Vitis vinifera GN=GSVIVT00026920001 PE=1 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 3.350e-59 Identity = 110/207 (53.14%), Postives = 144/207 (69.57%), Query Frame = 1 Query: 169 AILINGEVSDGQCDDQPTLDP--------RPHSVSITEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLEKGAVILGSQNPSHWDVVDPLPSYGRGIELPGRRYKSLINGYMLRDVVVTGDNGTIDGQGSVWWDWFSSQSLNYSRPHLVEFISSENVVVSNLTFLNAPAYNIHPVYCSNVHIQ 765 A+++ VS G+C L+ R HS S+ +FG VGDG+TLNT AFQ+A+ L + +GGAQLYVP+GKWLTGSF+LTSH TLFL + AV+L SQ+ S W V+ PLPSYGRG + RY SLI G L DV++TGDNGTIDGQG +WW F L Y+RP+L+E + S ++ +SNLT LN+P++N+HPVY N+ IQ Sbjct: 30 AVVLLLSVSRGECRKGRILEALEYSAISCRAHSASLVDFGGVGDGQTLNTKAFQDAVSELSKYGSEGGAQLYVPAGKWLTGSFSLTSHFTLFLHRDAVLLASQDISQWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIITGDNGTIDGQGGLWWQRFHGGKLKYTRPYLIELMYSADIQISNLTLLNSPSWNVHPVYSRNILIQ 236 The following BLAST results are available for this feature:
BLAST of FC872984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 1
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872984 ID=FC872984; Name=FC872984; organism=Citrus clementina; type=EST; length=765bpback to top |