FC873058
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873058 vs. ExPASy Swiss-Prot
Match: SGS3_SOLLC (Protein SUPPRESSOR OF GENE SILENCING 3 OS=Solanum lycopersicum GN=SGS3 PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.947e-18 Identity = 68/200 (34.00%), Postives = 88/200 (44.00%), Query Frame = 3 Query: 78 MSARRGGKSPIAAGSSNTSVKGKNVTEVSNSQVDHLSGSVADISLDSAQDDGGWEVYVRKSKNKAGSGTTKSFGSQ--------NSNYKAWGHLDSTQKPGMRGNGSSGRAPAKTWTTVNADSKIPAGRVNARPQLTNWVPETNNMATQTGIRPPLEHGWNWQSRAGSTIFKHSEDG--------------HDKESGNLD 611 MS + G P SN+S K K S V+ ++ V DI L+S Q++G WEVY RK KNK GS K + Q N N KAWGH D +K G R N SGR W+T + K+ ARP L + + + P L++GW+W SR S H +D HD E LD Sbjct: 1 MSFSKWGGKP-----SNSSEKQK---ASSTPTVEEINRGVGDIGLNSEQNEG-WEVYARKPKNKGGSSAGKQWAPQNPSPKAWGNQNTKAWGHPDVGKKSGTRNNAGSGRGSGNNWSTPSDPQKL------ARPHLYD-----GGFPSSAPVPPALKNGWDWSSRVASA---HPKDNSQVAAAADDDKASEHDAEDNELD 177
BLAST of FC873058 vs. ExPASy Swiss-Prot
Match: SGS3_ARATH (Protein SUPPRESSOR OF GENE SILENCING 3 OS=Arabidopsis thaliana GN=SGS3 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.658e-15 Identity = 54/144 (37.50%), Postives = 76/144 (52.78%), Query Frame = 3 Query: 138 KGKNVTEVSNSQVDHLSGSVADISLDSAQDDGG-WEVYVRKSKNKAGSGTTKSFGSQNSN-YKAWGHLDSTQKPGM--RGNGSSGRAPAKTWTTVNADSKIPAGRVNARPQLTNWVPETNNMATQTGIRPPLEHGWNWQSRAGS 557 K KNV +V+ L +A L S+QDDGG WEV +K+KNK G+ + K++ SQNSN +AWG + + RGN SGR N + + ++ R + + + N +A RPPLE GWNWQ+R GS Sbjct: 10 KEKNVQGGYRPEVEQLVQGLAGTRLASSQDDGGEWEVISKKNKNKPGNTSGKTWVSQNSNPPRAWGGQQQGRGSNVSGRGNNVSGRG--------NGNGRGIQANISGRGRALSRKYDNNFVAPPPVSRPPLEGGWNWQARGGS 145 The following BLAST results are available for this feature:
BLAST of FC873058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873058 ID=FC873058; Name=FC873058; organism=Citrus clementina; type=EST; length=721bpback to top |