FC873315
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873315 vs. ExPASy Swiss-Prot
Match: ODBA_DICDI (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Dictyostelium discoideum GN=bkdA PE=3 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 3.629e-46 Identity = 86/160 (53.75%), Postives = 113/160 (70.62%), Query Frame = 2 Query: 338 VPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAY 817 +PC+ ++D G + K SKE +KMY+ M+TL VMDS+LY+ QRQGR SFY+T+ GEEAI+IGSAAAL D I QYRE GV +WRG+T+ NQ N+ D GKGRQMP+H+GS+K+N TISSP+ TQLPQAVG +Y+ K+ + C + Y Sbjct: 64 IPCYTIMDQEGVVSKPDQDPNFSKEEVIKMYTTMLTLNVMDSILYDVQRQGRISFYMTSFGEEAIHIGSAAALEMSDTIFAQYRETGVFMWRGFTINDIINQCCTNEHDLGKGRQMPMHFGSRKINLQTISSPLTTQLPQAVGSSYAQKLAGEKNCTIVY 223
BLAST of FC873315 vs. ExPASy Swiss-Prot
Match: ODBA_RAT (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial (Fragment) OS=Rattus norvegicus GN=Bckdha PE=1 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 1.167e-44 Identity = 83/182 (45.60%), Postives = 118/182 (64.84%), Query Frame = 2 Query: 272 FPGGKVGYTSEMRFIPESSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAY 817 FPG + ++ FI + +P +RV+D G++I S+ + +E +K+Y M L MD +LYE+QRQGR SFY+T GEE ++GSAAAL D + QYRE GVL++R Y L+ F Q + N +D GKGRQMP+HYG K+ +++TISSP+ATQ+PQAVG AY+ K + + Y Sbjct: 50 FPGASAEFVDKLEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPQEEVLKLYRSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGSAAALERTDLVFGQYREAGVLMYRDYPLELFMAQCYGNVSDPGKGRQMPVHYGCKERHFVTISSPLATQIPQAVGAAYAAKRANANQIVICY 231
BLAST of FC873315 vs. ExPASy Swiss-Prot
Match: ODBA_PANTR (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Pan troglodytes GN=BCKDHA PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.525e-44 Identity = 84/182 (46.15%), Postives = 118/182 (64.84%), Query Frame = 2 Query: 272 FPGGKVGYTSEMRFIPESSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAY 817 FPG + ++ FI + +P +RV+D G++I S+ + KE +K+Y M L MD +LYE+QRQGR SFY+T GEE ++GSAAAL D + QYRE GVL++R Y L+ F Q + N +D GKGRQMP+HYG K+ +++TISSP+ATQ+PQAVG AY+ K + + Y Sbjct: 54 FPGASAEFIDKLEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGSAAALDNTDLVFGQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLATQIPQAVGAAYAAKRANANRVVICY 235
BLAST of FC873315 vs. ExPASy Swiss-Prot
Match: ODBA_MACFA (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Macaca fascicularis GN=BCKDHA PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.525e-44 Identity = 84/182 (46.15%), Postives = 118/182 (64.84%), Query Frame = 2 Query: 272 FPGGKVGYTSEMRFIPESSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAY 817 FPG + ++ FI + +P +RV+D G++I S+ + KE +K+Y M L MD +LYE+QRQGR SFY+T GEE ++GSAAAL D + QYRE GVL++R Y L+ F Q + N +D GKGRQMP+HYG K+ +++TISSP+ATQ+PQAVG AY+ K + + Y Sbjct: 54 FPGASAEFIDKLEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGSAAALDNTDLVFGQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLATQIPQAVGAAYAAKRANANRVVICY 235
BLAST of FC873315 vs. ExPASy Swiss-Prot
Match: ODBA_HUMAN (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Homo sapiens GN=BCKDHA PE=1 SV=2) HSP 1 Score: 179.874 bits (455), Expect = 1.525e-44 Identity = 84/182 (46.15%), Postives = 118/182 (64.84%), Query Frame = 2 Query: 272 FPGGKVGYTSEMRFIPESSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAY 817 FPG + ++ FI + +P +RV+D G++I S+ + KE +K+Y M L MD +LYE+QRQGR SFY+T GEE ++GSAAAL D + QYRE GVL++R Y L+ F Q + N +D GKGRQMP+HYG K+ +++TISSP+ATQ+PQAVG AY+ K + + Y Sbjct: 54 FPGASAEFIDKLEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGSAAALDNTDLVFGQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLATQIPQAVGAAYAAKRANANRVVICY 235
BLAST of FC873315 vs. ExPASy Swiss-Prot
Match: ODBA_MOUSE (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Mus musculus GN=Bckdha PE=1 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.436e-44 Identity = 82/182 (45.05%), Postives = 117/182 (64.29%), Query Frame = 2 Query: 272 FPGGKVGYTSEMRFIPESSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAY 817 FPG + ++ FI + +P +RV+D G++I S+ + +E +K Y M L MD +LYE+QR+GR SFY+T GEE ++GSAAAL D + QYRE GVL++R Y L+ F +Q + N D GKGRQMP+HYG K+ +++TISSP+ATQ+PQAVG AY+ K + + Y Sbjct: 51 FPGASAEFVDKLEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPQEEVLKFYRSMTLLNTMDRILYESQREGRISFYMTNYGEEGTHVGSAAALERTDLVFGQYREAGVLMYRDYPLELFMSQCYGNVNDPGKGRQMPVHYGCKERHFVTISSPLATQIPQAVGAAYAAKRANANRIVICY 232
BLAST of FC873315 vs. ExPASy Swiss-Prot
Match: ODBA_BOVIN (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Bos taurus GN=BCKDHA PE=2 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.291e-43 Identity = 82/182 (45.05%), Postives = 117/182 (64.29%), Query Frame = 2 Query: 272 FPGGKVGYTSEMRFIPESSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAY 817 FPG + ++ FI + +P +RV+D G++I S+ + +E +K Y M L MD +LYE+QRQGR SFY+T GEE ++GSAAAL D + QYRE GVL++R Y L+ F Q + N +D GKGRQMP+HYG ++ +++TISSP+ATQ+PQAVG AY+ K + + Y Sbjct: 64 FPGASAEFIDKLEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPQEKVLKFYKSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGSAAALDDTDLVFGQYREAGVLMYRDYPLELFMAQCYGNVSDLGKGRQMPVHYGCRERHFVTISSPLATQIPQAVGAAYAAKRANANRVVICY 245
BLAST of FC873315 vs. ExPASy Swiss-Prot
Match: ODBA_PSEAE (2-oxoisovalerate dehydrogenase subunit alpha OS=Pseudomonas aeruginosa GN=bkdA1 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.063e-21 Identity = 63/165 (38.18%), Postives = 94/165 (56.97%), Query Frame = 2 Query: 320 ESSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAV--GVAYSLKMEKKDACA 808 E+S+ RVLDD+G + G Q+S E ++ M+ ++ D+ + AQRQ + SFY+ +GEEAI AL D P YR+ G+L+ R Y L Q+ +N+AD KGRQ+PI Y SK+ + +IS +ATQ QAV G+A ++K + + A A Sbjct: 46 ETSDLAYSLVRVLDDDGHAV-GPWNPQLSNEQLLRGMRAMLKTRLFDARMLTAQRQKKLSFYMQCLGEEAIATAHTLALRDGDMCFPTYRQQGILITREYPLVDMICQLLSNEADPLKGRQLPIMYSSKEAGFFSISGNLATQFIQAVGWGMASAIKGDTRIASA 209
BLAST of FC873315 vs. ExPASy Swiss-Prot
Match: ODBA_BACSU (2-oxoisovalerate dehydrogenase subunit alpha OS=Bacillus subtilis GN=bfmBAA PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.040e-21 Identity = 56/138 (40.58%), Postives = 83/138 (60.14%), Query Frame = 2 Query: 401 VSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSAD-DFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKG-RQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACA 808 ++ + AV MY M+ + +D ++ R G+ F ++ G+EA +G+A AL + D++LP YR+ GV+L G T + FA AD G RQMP H+G KK +T SSP+ TQ+P AVG+A + +MEKKD A Sbjct: 11 LTDQEAVDMYRTMLLARKIDERMWLLNRSGKIPFVISCQGQEAAQVGAAFALDREMDYVLPYYRDMGVVLAFGMTAKDLMMSGFAKAADPNSGGRQMPGHFGQKKNRIVTGSSPVTTQVPHAVGIALAGRMEKKDIAA 148
BLAST of FC873315 vs. ExPASy Swiss-Prot
Match: ODBA_PSEPU (2-oxoisovalerate dehydrogenase subunit alpha OS=Pseudomonas putida GN=bkdA1 PE=1 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 2.619e-20 Identity = 57/155 (36.77%), Postives = 91/155 (58.71%), Query Frame = 2 Query: 350 RVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVG--VAYSLKMEKKDACA 808 RVLD+ G+ +G + + ++ + M+ ++ DS + AQRQ + SFY+ ++GEEAI G A AL+ D P YR+ +L+ R +L + Q+ +N+ D KGRQ+PI Y ++ + TIS +ATQ QAVG +A ++K + K A A Sbjct: 56 RVLDEQGDA-QGPWAEDIDPQILRQGMRAMLKTRIFDSRMVVAQRQKKMSFYMQSLGEEAIGSGQALALNRTDMCFPTYRQQSILMARDVSLVEMICQLLSNERDPLKGRQLPIMYSVREAGFFTISGNLATQFVQAVGWAMASAIKGDTKIASA 209 The following BLAST results are available for this feature:
BLAST of FC873315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873315 ID=FC873315; Name=FC873315; organism=Citrus clementina; type=EST; length=821bpback to top |