FC873643
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873643 vs. ExPASy Swiss-Prot
Match: SVOP_BOVIN (Synaptic vesicle 2-related protein OS=Bos taurus GN=SVOP PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.822e-24 Identity = 64/168 (38.10%), Postives = 96/168 (57.14%), Query Frame = 3 Query: 48 TTLLLWFLFFGNSFVYYGVILLTSEL-------------NSEEARCGSTLLLLEHAQDASLYVNVFITSLAELPGLLLSAVIVDRVGRKISMAIMSXXXXXXXXXXXXHQPVTLTTVLLFGARMFANGTFAVACVYAPEVYPTSLRATGAGIASAVGRIGGMVCPLVS 512 TTLLLWF++F N+F YYG++LLT+EL + EA+C L E+ + Y+++ T+L+E PG+L++ I+DR+GRK +MA+ + T+LLF AR F +G F A VY PEVYPT+ RA G G S + R+G ++ P ++ Sbjct: 316 TTLLLWFIWFSNAFSYYGLVLLTTELFQAGDVCSISSRKKAVEAKCS---LACEYLSEED-YMDLLWTTLSEFPGVLVTLWIIDRLGRKKTMALCFVVFSFCSLLLFICVGRNMLTLLLFIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGALITPFIA 479
BLAST of FC873643 vs. ExPASy Swiss-Prot
Match: SVOP_PONAB (Synaptic vesicle 2-related protein OS=Pongo abelii GN=SVOP PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.380e-24 Identity = 64/168 (38.10%), Postives = 96/168 (57.14%), Query Frame = 3 Query: 48 TTLLLWFLFFGNSFVYYGVILLTSEL-------------NSEEARCGSTLLLLEHAQDASLYVNVFITSLAELPGLLLSAVIVDRVGRKISMAIMSXXXXXXXXXXXXHQPVTLTTVLLFGARMFANGTFAVACVYAPEVYPTSLRATGAGIASAVGRIGGMVCPLVS 512 TTLLLWF++F N+F YYG++LLT+EL + EA+C L E+ + Y+++ T+L+E PG+L++ I+DR+GRK +MA+ + T+LLF AR F +G F A VY PEVYPT+ RA G G S + R+G ++ P ++ Sbjct: 316 TTLLLWFIWFSNAFSYYGLVLLTTELFQAGDVCGISSRKKAVEAKCS---LACEYLSEED-YMDLLWTTLSEFPGVLVTLWIIDRLGRKKTMALCFVIFSFCSLLLFICVGRNVLTLLLFIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGALITPFIA 479
BLAST of FC873643 vs. ExPASy Swiss-Prot
Match: SVOP_HUMAN (Synaptic vesicle 2-related protein OS=Homo sapiens GN=SVOP PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.380e-24 Identity = 64/168 (38.10%), Postives = 96/168 (57.14%), Query Frame = 3 Query: 48 TTLLLWFLFFGNSFVYYGVILLTSEL-------------NSEEARCGSTLLLLEHAQDASLYVNVFITSLAELPGLLLSAVIVDRVGRKISMAIMSXXXXXXXXXXXXHQPVTLTTVLLFGARMFANGTFAVACVYAPEVYPTSLRATGAGIASAVGRIGGMVCPLVS 512 TTLLLWF++F N+F YYG++LLT+EL + EA+C L E+ + Y+++ T+L+E PG+L++ I+DR+GRK +MA+ + T+LLF AR F +G F A VY PEVYPT+ RA G G S + R+G ++ P ++ Sbjct: 316 TTLLLWFIWFSNAFSYYGLVLLTTELFQAGDVCGISSRKKAVEAKCS---LACEYLSEED-YMDLLWTTLSEFPGVLVTLWIIDRLGRKKTMALCFVIFSFCSLLLFICVGRNVLTLLLFIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGALITPFIA 479
BLAST of FC873643 vs. ExPASy Swiss-Prot
Match: SVOP_XENLA (Synaptic vesicle 2-related protein OS=Xenopus laevis GN=svop PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.060e-24 Identity = 66/165 (40.00%), Postives = 91/165 (55.15%), Query Frame = 3 Query: 48 TTLLLWFLFFGNSFVYYGVILLTSEL----------NSEEARCGSTLLLLEHAQDASLYVNVFITSLAELPGLLLSAVIVDRVGRKISMAIMSXXXXXXXXXXXXHQPVTLTTVLLFGARMFANGTFAVACVYAPEVYPTSLRATGAGIASAVGRIGGMVCPLVS 512 TTLLLWF++F N+F YYG++LLT+EL N +A L E+ Y ++ T+L+E PGLL++ I+DRVGRK +MAI + TV LF AR F +G F A VY PEVYPT+ RA G G S + R+G ++ P ++ Sbjct: 316 TTLLLWFIWFSNAFSYYGLVLLTTELFQAGDVCSISNQRKAVKPKCSLACEYLTVED-YTDLLWTTLSEFPGLLVTLWIIDRVGRKKTMAICFIIFSFSALLLFLCVGRNVLTVFLFIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGALITPFIA 479
BLAST of FC873643 vs. ExPASy Swiss-Prot
Match: SVOP_RAT (Synaptic vesicle 2-related protein OS=Rattus norvegicus GN=Svop PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 9.045e-24 Identity = 62/168 (36.90%), Postives = 93/168 (55.36%), Query Frame = 3 Query: 48 TTLLLWFLFFGNSFVYYGVILLTSEL-------------NSEEARCGSTLLLLEHAQDASLYVNVFITSLAELPGLLLSAVIVDRVGRKISMAIMSXXXXXXXXXXXXHQPVTLTTVLLFGARMFANGTFAVACVYAPEVYPTSLRATGAGIASAVGRIGGMVCPLVS 512 TTLLLWF++F N+F YYG++LLT+EL + EA+C L Y+++ T+L+E PG+L++ ++DR+GRK +MA+ + T+LLF AR F +G F A VY PEVYPT+ RA G G S + R+G ++ P ++ Sbjct: 316 TTLLLWFIWFSNAFSYYGLVLLTTELFQAGDVCSISSRKKAVEAKCSLACEYLSKED----YMDLLWTTLSEFPGVLVTLWVIDRLGRKKTMALCFVIFSLCSLLLFICIGRNVLTLLLFIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGALITPFIA 479
BLAST of FC873643 vs. ExPASy Swiss-Prot
Match: SVOP_MOUSE (Synaptic vesicle 2-related protein OS=Mus musculus GN=Svop PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 9.045e-24 Identity = 62/168 (36.90%), Postives = 93/168 (55.36%), Query Frame = 3 Query: 48 TTLLLWFLFFGNSFVYYGVILLTSEL-------------NSEEARCGSTLLLLEHAQDASLYVNVFITSLAELPGLLLSAVIVDRVGRKISMAIMSXXXXXXXXXXXXHQPVTLTTVLLFGARMFANGTFAVACVYAPEVYPTSLRATGAGIASAVGRIGGMVCPLVS 512 TTLLLWF++F N+F YYG++LLT+EL + EA+C L Y+++ T+L+E PG+L++ ++DR+GRK +MA+ + T+LLF AR F +G F A VY PEVYPT+ RA G G S + R+G ++ P ++ Sbjct: 316 TTLLLWFIWFSNAFSYYGLVLLTTELFQAGDVCSISSRKKAVEAKCSLACEYLSKED----YMDLLWTTLSEFPGVLVTLWVIDRLGRKKTMALCFIIFSLCSLLLFICIGRNVLTLLLFIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGALITPFIA 479
BLAST of FC873643 vs. ExPASy Swiss-Prot
Match: YOU1_CAEEL (Putative transporter ZK637.1 OS=Caenorhabditis elegans GN=ZK637.1 PE=3 SV=5) HSP 1 Score: 102.064 bits (253), Expect = 4.201e-21 Identity = 61/162 (37.65%), Postives = 88/162 (54.32%), Query Frame = 3 Query: 45 RTTLLLWFLFFGNSFVYYGVILLTSELNSEEARCGSTLLL----LEHAQDA--SLYVNVFITSLAELPGLLLSAVIVDRVGRKISMAIMSXXXXXXXXXXXXHQPVTLTTVLLFGARMFANGTFAVACVYAPEVYPTSLRATGAGIASAVGRIGGMVCPLVS 512 +TT+LLW ++ +F YYG++L T+ L C L +E Q S Y ++ T+LAE PGL+++ +I++ GRK +MA+ TVL+F AR F +G F A VY PEVYPT+LRA G G SA+ RIG +V P ++ Sbjct: 317 KTTILLWCIWAITAFSYYGMVLFTTVLFQSHDECHGGLFSNGTQMEVCQPLTRSDYFDLLSTTLAEFPGLIITVLIIEWFGRKKTMALEYAVFAIFTFLLYFCLDRFTVTVLIFVARAFISGAFQCAYVYTPEVYPTTLRAVGLGTCSAMARIGAIVTPFIA 478
BLAST of FC873643 vs. ExPASy Swiss-Prot
Match: SVOPL_DANRE (Putative transporter SVOPL OS=Danio rerio GN=svopl PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.158e-17 Identity = 57/174 (32.76%), Postives = 91/174 (52.30%), Query Frame = 3 Query: 45 RTTLLLWFLFFGNSFVYYGVILLTSELNSEEARCGSTLLL---LEHAQDASL----------YVNVFITSLAELPGLLLSAVIVDRVGRKISMAIMSXXXXXXXXXXXXHQPVTLTTVLLFGARMFANGTFAVACVYAPEVYPTSLRATGAGIASAVGRIGGMVCPLVSVGLVT 527 RT+LLLW+ +F SF YYG +L +SEL + C + L ++H Q+ +L Y + I+ L E+ + L+ ++++ VGRK SM I+ + T+LLF R + F V +Y EVYPTS+R+ G G ++ RIGGM+ P ++ L++ Sbjct: 296 RTSLLLWYSWFVASFSYYGSVLSSSELLEKNLLCVTDPDLEHQIKHIQEETLCYCIPFNSDDYQTLLISCLGEVALIPLNIILLNIVGRKYSMVILLLLSAFFFMLVNICTTMLGFTILLFLLRSVVSMNFNVVYIYTAEVYPTSVRSIGMGFCTSFSRIGGMIAPFIAQVLMS 469
BLAST of FC873643 vs. ExPASy Swiss-Prot
Match: SVOPL_HUMAN (Putative transporter SVOPL OS=Homo sapiens GN=SVOPL PE=2 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 5.500e-13 Identity = 51/178 (28.65%), Postives = 85/178 (47.75%), Query Frame = 3 Query: 42 IRTTLLLWFLFFGNSFVYYGVILLTSELNSEEARCGS---TLLLLE-------------HAQDASLYVNVFITSLAELPGLLLSAVIVDRVGRKISMAIMSXXXXXXXXXXXXHQPVTLTTVLLFGARMFANGTFAVACVYAPEVYPTSLRATGAGIASAVGRIGGMVCPLVSVGLVT 527 +RTTL +W ++ G SF YYGVIL ++EL + CGS + +++ H S Y + I+++ E+ L+ + ++ +GR++S++I LF R F +Y EVYPT++RA G G + ++ RIG MV P +S L++ Sbjct: 278 LRTTLQIWVIWLGISFAYYGVILASAELLERDLVCGSKSDSAVVVTGGDSGESQSPCYCHMFAPSDYRTMIISTIGEIALNPLNILGINFLGRRLSLSITMGCTALFFLLLNICTSSAGLIGFLFMLRALVAANFNTVYIYTAEVYPTTMRALGMGTSGSLCRIGAMVAPFISQVLMS 455
BLAST of FC873643 vs. ExPASy Swiss-Prot
Match: SVOPL_MOUSE (Putative transporter SVOPL OS=Mus musculus GN=Svopl PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.183e-13 Identity = 53/180 (29.44%), Postives = 84/180 (46.67%), Query Frame = 3 Query: 42 IRTTLLLWFLFFGNSFVYYGVILLTSELNSEEARCGSTL----LLLEHAQDA--------------SLYVNVFITSLAELPGLLLSAVIVDRVGRKISMAIMSXXXXXXXXXXXXHQPVTLTTVLLFGARMFANGTFAVACVYAPEVYPTSLRATGAGIASAVGRIGGMVCPLVSVGLVT 527 +RTTL +W ++ G SF YYGVIL ++EL + CGS ++E D+ S Y + I++L E+ L+ + ++ +GR++S++I LF R F +Y EVYPT +RA G G + ++ RIG MV P +S L++ Sbjct: 278 LRTTLQIWIIWLGISFAYYGVILASAELLERDLVCGSKSESEPEVVETTGDSGEGLSPCYCHIFAPSDYRTMIISTLGEIALNPLNILGINFLGRRLSLSITMGCTALFFLLLNICTSSAGLIGFLFMLRALVAANFNTIYIYTAEVYPTPMRAIGMGTSGSLCRIGAMVAPFISQVLMS 457 The following BLAST results are available for this feature:
BLAST of FC873643 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873643 ID=FC873643; Name=FC873643; organism=Citrus clementina; type=EST; length=846bpback to top |