FC873755
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873755 vs. ExPASy Swiss-Prot
Match: TPPC3_CHICK (Trafficking protein particle complex subunit 3 OS=Gallus gallus GN=TRAPPC3 PE=2 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 6.813e-52 Identity = 95/165 (57.58%), Postives = 129/165 (78.18%), Query Frame = 1 Query: 109 ERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNVTRCVDFRETAEVIAKVGFKMFLGVTATVSNWDADGTCCSIILEDNPLVDFVELPDTCQGLYYCNILSGVIRGALEMVSMKTEVTWIRDVLRGDDAYELQVKLLKQVPEEYP 603 +++N+ELFTLTYGA V QL D E E+VNKQLD+MGYNIG+RLI++FLA+SNV RC DFRETA+VIAK+ FKM+LG+T +++NW G S+ILE+NPLVDFVELPD L Y N+L GV+RGALEMV M +V +++D L+GD E+++K ++++ + P Sbjct: 12 KKMNSELFTLTYGALVTQLCKDYENDEDVNKQLDKMGYNIGVRLIEDFLARSNVGRCHDFRETADVIAKIAFKMYLGITPSITNWSPGGDEFSLILENNPLVDFVELPDNHSSLIYSNLLCGVLRGALEMVQMAVDVKFVQDTLKGDSVTEIRMKFIRRIEDNLP 176
BLAST of FC873755 vs. ExPASy Swiss-Prot
Match: TPPC3_RAT (Trafficking protein particle complex subunit 3 OS=Rattus norvegicus GN=Trappc3 PE=2 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 9.838e-51 Identity = 94/165 (56.97%), Postives = 128/165 (77.58%), Query Frame = 1 Query: 109 ERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNVTRCVDFRETAEVIAKVGFKMFLGVTATVSNWDADGTCCSIILEDNPLVDFVELPDTCQGLYYCNILSGVIRGALEMVSMKTEVTWIRDVLRGDDAYELQVKLLKQVPEEYP 603 +++++ELFTLTYGA V QL D E E+VNKQLD+MGYNIG+RLI++FLA+SNV RC DFRETA+VIAKV FKM+LG+T +++NW G S+ILE+NPLVDFVELPD L Y N+L GV+RGALEMV M E +++D L+GD E++++ ++++ + P Sbjct: 12 KKMSSELFTLTYGALVTQLCKDYENDEDVNKQLDRMGYNIGVRLIEDFLARSNVGRCHDFRETADVIAKVAFKMYLGITPSITNWSPAGDEFSLILENNPLVDFVELPDNHSALIYSNLLCGVLRGALEMVQMAVEAKFVQDTLKGDGVTEIRMRFIRRIEDNLP 176
BLAST of FC873755 vs. ExPASy Swiss-Prot
Match: TPPC3_MOUSE (Trafficking protein particle complex subunit 3 OS=Mus musculus GN=Trappc3 PE=1 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 9.838e-51 Identity = 94/165 (56.97%), Postives = 128/165 (77.58%), Query Frame = 1 Query: 109 ERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNVTRCVDFRETAEVIAKVGFKMFLGVTATVSNWDADGTCCSIILEDNPLVDFVELPDTCQGLYYCNILSGVIRGALEMVSMKTEVTWIRDVLRGDDAYELQVKLLKQVPEEYP 603 +++++ELFTLTYGA V QL D E E+VNKQLD+MGYNIG+RLI++FLA+SNV RC DFRETA+VIAKV FKM+LG+T +++NW G S+ILE+NPLVDFVELPD L Y N+L GV+RGALEMV M E +++D L+GD E++++ ++++ + P Sbjct: 12 KKMSSELFTLTYGALVTQLCKDYENDEDVNKQLDRMGYNIGVRLIEDFLARSNVGRCHDFRETADVIAKVAFKMYLGITPSITNWSPAGDEFSLILENNPLVDFVELPDNHSALIYSNLLCGVLRGALEMVQMAVEAKFVQDTLKGDGVTEIRMRFIRRIEDNLP 176
BLAST of FC873755 vs. ExPASy Swiss-Prot
Match: TPPC3_DICDI (Trafficking protein particle complex subunit 3 OS=Dictyostelium discoideum GN=trappc3 PE=3 SV=2) HSP 1 Score: 199.519 bits (506), Expect = 1.678e-50 Identity = 102/174 (58.62%), Postives = 131/174 (75.29%), Query Frame = 1 Query: 85 GDAIFANVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNVTRCVDFRETAEVIAKVGFKMFLGVTATVSNWDADGTCCSIILEDNPLVDFVELPDTCQ-GLYYCNILSGVIRGALEMVSMKTEVTWIRDVLRGDDAYELQVKLLKQVPEEYP 603 G+ +F VE++N+ELFTLTYGA V QL+ D E++E+VN +L+QMGYNIGIRLI+EFLAKS + RC DF ETAEVIAKVGFKMFLGV A V +WDA+ + +EDNPL+DFVELPD + LYY NIL GV+RGALEMV MK + T+++ L D E++V L + + + P Sbjct: 9 GNDVFNKVEKINSELFTLTYGALVTQLIKDYEDIEQVNIKLEQMGYNIGIRLIEEFLAKSGIGRCSDFIETAEVIAKVGFKMFLGVNAHVGDWDANRKEFHLTIEDNPLIDFVELPDQYKHKLYYSNILCGVMRGALEMVQMKVKCTFVKCTLSDDSTSEIKVVLEEVLSDMIP 182
BLAST of FC873755 vs. ExPASy Swiss-Prot
Match: TPPC3_HUMAN (Trafficking protein particle complex subunit 3 OS=Homo sapiens GN=TRAPPC3 PE=1 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 2.863e-50 Identity = 93/165 (56.36%), Postives = 128/165 (77.58%), Query Frame = 1 Query: 109 ERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNVTRCVDFRETAEVIAKVGFKMFLGVTATVSNWDADGTCCSIILEDNPLVDFVELPDTCQGLYYCNILSGVIRGALEMVSMKTEVTWIRDVLRGDDAYELQVKLLKQVPEEYP 603 +++++ELFTLTYGA V QL D E E+VNKQLD+MG+NIG+RLI++FLA+SNV RC DFRETA+VIAKV FKM+LG+T +++NW G S+ILE+NPLVDFVELPD L Y N+L GV+RGALEMV M E +++D L+GD E++++ ++++ + P Sbjct: 12 KKMSSELFTLTYGALVTQLCKDYENDEDVNKQLDKMGFNIGVRLIEDFLARSNVGRCHDFRETADVIAKVAFKMYLGITPSITNWSPAGDEFSLILENNPLVDFVELPDNHSSLIYSNLLCGVLRGALEMVQMAVEAKFVQDTLKGDGVTEIRMRFIRRIEDNLP 176
BLAST of FC873755 vs. ExPASy Swiss-Prot
Match: BET3_SCHPO (Transport protein particle subunit bet3 OS=Schizosaccharomyces pombe GN=bet3 PE=2 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 4.277e-46 Identity = 94/178 (52.81%), Postives = 128/178 (71.91%), Query Frame = 1 Query: 85 GDAIFANVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNVTRCVDFRETAEVIAKVGFKMFLGVTATVSNWDADGTCCSIILEDNPLVDFVELP-DTCQGLYYCNILSGVIRGALEMVSMKTEVTWIRDVLRGDDAYELQVKLLKQVPEEYPYKDD 615 G+ ++ V++VNAELF LTYG+ V QL D+ E+VN++LD+MGYNIGIRLI++FLAK+ RC DFRET E +AKVGFK+FL + +S+ DG + L+DNPL +FVELP D Q L+Y NIL GVIRGALEM+ M + ++RD+LRGD+ E++V L + + EE P D+ Sbjct: 7 GEDVYKKVDKVNAELFVLTYGSIVAQLCKDMN-YEKVNEELDKMGYNIGIRLIEDFLAKTEWPRCADFRETGETVAKVGFKVFLNFSPIISSVSDDGNTFVLTLDDNPLAEFVELPADARQKLWYSNILCGVIRGALEMLQMDVDAVFLRDILRGDEHTEIRVHLKRILKEEIPPGDE 183
BLAST of FC873755 vs. ExPASy Swiss-Prot
Match: BET3_YEAST (Transport protein particle 22 kDa subunit OS=Saccharomyces cerevisiae GN=BET3 PE=1 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.685e-40 Identity = 84/180 (46.67%), Postives = 125/180 (69.44%), Query Frame = 1 Query: 85 GDAIFAN-VERVNAELFTLTYGATVRQLLTDLE-EVEEVNKQLDQMGYNIGIRLIDEFLAKSNVTRCVDFRETAEVIAKVGFKMFLGVTATVSNWDADGTCCSIILEDNPLVDFVELP-DTCQGLYYCNILSGVIRGALEMVSMKTEVTWIRDVLRGDDAYELQVKLLKQVPEEYPYKDD 615 G+ I+ N E++N ELFTLTYG+ V QL D E + +VN L MGYNIG RLI++FLA++ + RC + +T+EV++K FK+FL +T ++NW + S+IL++NPL DFVELP D + L+Y NIL GV++G+LEMV + +V ++ D+LRGD E++VKL + + +E P +D Sbjct: 14 GEEIWKNKTEKINTELFTLTYGSIVAQLCQDYERDFNKVNDHLYSMGYNIGCRLIEDFLARTALPRCENLVKTSEVLSKCAFKIFLNITPNITNWSHNKDTFSLILDENPLADFVELPMDAMKSLWYSNILCGVLKGSLEMVQLDCDVWFVSDILRGDSQTEIKVKLNRILKDEIPIGED 193
BLAST of FC873755 vs. ExPASy Swiss-Prot
Match: TPC3L_MOUSE (Trafficking protein particle complex subunit 3-like protein OS=Mus musculus GN=Bet3l PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 5.600e-38 Identity = 80/163 (49.08%), Postives = 113/163 (69.33%), Query Frame = 1 Query: 112 RVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNVTRCVDFRETAEVIAKVGFKMFLGVTATVSNWDADGTCCSIILEDNPLVDFV-ELPDTCQGLYYCNILSGVIRGALEMVSMKTEVTWIRDVLRGDDAYELQVKLLKQVPEE 597 ++N +LF LTYGA V QL D E+ E+VNK LD+MGYNIG RL+++FLA+S V RC + E +IA+V FKM+LG+T +V+ ++ S+IL NPL +FV ELP L YCN+L G+IRGALEMV + VT+++D L+GD E+ + LK++ E+ Sbjct: 13 KINKDLFVLTYGALVAQLCKDYEKDEDVNKYLDKMGYNIGTRLVEDFLARSCVRRCHSYSEIINIIAQVAFKMYLGITPSVTCHNSSRNEFSLILHKNPLAEFVEELPAGRSALCYCNLLCGIIRGALEMVHLAANVTFLQDRLKGDSVTEIGITFLKKLDEK 175
BLAST of FC873755 vs. ExPASy Swiss-Prot
Match: TPC3L_HUMAN (Trafficking protein particle complex subunit 3-like protein OS=Homo sapiens GN=BET3L PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.629e-37 Identity = 80/163 (49.08%), Postives = 115/163 (70.55%), Query Frame = 1 Query: 112 RVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNVTRCVDFRETAEVIAKVGFKMFLGVTATVSNWDADGTCCSIILEDNPLVDFV-ELPDTCQGLYYCNILSGVIRGALEMVSMKTEVTWIRDVLRGDDAYELQVKLLKQVPEE 597 ++N +LF LTYGA V QL D E+ E+VN+ LD+MGY IG RL+++FLA+S V RC + E ++IA+V FKM+LG+T +V+ ++ S+ILE NPLV+FV ELP L YCN+L G+IRGALEMV + +VT+++D L+GD E+ + LK+ E+ Sbjct: 13 KINKDLFVLTYGALVAQLCKDYEKDEDVNQYLDKMGYGIGTRLVEDFLARSCVGRCHSYSEIIDIIAQVAFKMYLGITPSVTCNNSSKNEFSLILEKNPLVEFVEELPAGRSSLCYCNLLCGIIRGALEMVHLAADVTFLQDRLKGDSVTEIGITFLKKRDEK 175
BLAST of FC873755 vs. ExPASy Swiss-Prot
Match: TPPC3_CAEBR (Probable trafficking protein particle complex subunit 3 OS=Caenorhabditis briggsae GN=CBG10062 PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.170e-27 Identity = 65/140 (46.43%), Postives = 94/140 (67.14%), Query Frame = 1 Query: 100 ANVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAK-SNVTRCVDFRETAEVIAKVGFKMFLGVTATVSNWDADGTCCSIILEDNPLVDFVELPD--TCQGLYYCNILSGVIRGALEMVSMK 510 A+ ++++AELF LTYGA V ++L D E+ ++V QLD+MG+N+G RL D+FLAK +NV RCVD R+ A+V+ + +LGV+AT S+W + I LE NPL + V++P GL Y +++G IRGALE V K Sbjct: 10 ADSKKMSAELFCLTYGAMVTEMLKDYEDPKDVTVQLDKMGFNMGTRLADDFLAKNANVPRCVDTRQIADVLCRNAIPCYLGVSATASSWSSGDREFIITLESNPLTELVQVPPNLVSAGLSYSQMIAGAIRGALEAVHFK 149 The following BLAST results are available for this feature:
BLAST of FC873755 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873755 ID=FC873755; Name=FC873755; organism=Citrus clementina; type=EST; length=769bpback to top |