FC873768
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873768 vs. ExPASy Swiss-Prot
Match: TM9S1_HUMAN (Transmembrane 9 superfamily member 1 OS=Homo sapiens GN=TM9SF1 PE=2 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 8.047e-33 Identity = 69/156 (44.23%), Postives = 101/156 (64.74%), Query Frame = 2 Query: 248 FKVGDPVPLYANKVGPFHNPSETYRYFDLPFCSPDAIIKEKREALGEVLNGDRLVSAPYKLNFRDEKDSALACRKKLSEQDVAQFRSAVEKDFYFQMYYDDLPIWGFIGKVDKEGKTHPSEYKYFLYKHIQFDILYNKDRVI--EISAR-MDPHSL 706 +K GDPV LY NKVGP+HNP ETY Y+ LP C P+ I + K +LGEVL+GDR+ + Y++ FR+ + + C +LS V Q R A+E+ +YF+ DDLPI GF+G +++ G P +K L+ H+ F + ++ DR+I +S R + PHSL Sbjct: 36 YKAGDPVILYVNKVGPYHNPQETYHYYQLPVCCPEKI-RHKSLSLGEVLDGDRMAESLYEIRFRENVEKRILCHMQLSSAQVEQLRQAIEELYYFEFVVDDLPIRGFVGYMEESGFL-PHSHKIGLWTHLDFHLEFHGDRIIFANVSVRDVKPHSL 189
BLAST of FC873768 vs. ExPASy Swiss-Prot
Match: TM9S1_RAT (Transmembrane 9 superfamily member 1 OS=Rattus norvegicus GN=Tm9sf1 PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.051e-32 Identity = 73/182 (40.11%), Postives = 110/182 (60.44%), Query Frame = 2 Query: 170 PITLLVVGVLIACCLTHVRSDSSDHRFKVGDPVPLYANKVGPFHNPSETYRYFDLPFCSPDAIIKEKREALGEVLNGDRLVSAPYKLNFRDEKDSALACRKKLSEQDVAQFRSAVEKDFYFQMYYDDLPIWGFIGKVDKEGKTHPSEYKYFLYKHIQFDILYNKDRVI--EISAR-MDPHSL 706 P+ +L++G+ H +K GDPV LY NKVGP+HNP ETY Y+ LP C P+ I + K +LGEVL+GDR+ + Y++ FR+ + + C +LS V Q R A+E+ +YF+ DDLPI GF+G +++ G P +K L+ H+ F + ++ DR+I +S R + PHSL Sbjct: 16 PVLILLLGI------GHGPRVEGVTHYKPGDPVILYVNKVGPYHNPQETYHYYQLPVCCPEKI-RHKSLSLGEVLDGDRMAESLYEIRFRENVEKRILCHMQLSSAQVEQLRQAIEELYYFEFVVDDLPIRGFVGYMEESGFL-PHSHKIGLWTHLDFHLEFHGDRIIFANVSVRDVKPHSL 189
BLAST of FC873768 vs. ExPASy Swiss-Prot
Match: TM9S1_PONAB (Transmembrane 9 superfamily member 1 OS=Pongo abelii GN=TM9SF1 PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.051e-32 Identity = 69/156 (44.23%), Postives = 100/156 (64.10%), Query Frame = 2 Query: 248 FKVGDPVPLYANKVGPFHNPSETYRYFDLPFCSPDAIIKEKREALGEVLNGDRLVSAPYKLNFRDEKDSALACRKKLSEQDVAQFRSAVEKDFYFQMYYDDLPIWGFIGKVDKEGKTHPSEYKYFLYKHIQFDILYNKDRVI--EISAR-MDPHSL 706 +K GDPV LY NKVGP+HNP ETY Y+ LP C P+ I + K +LGEVL+GDR+ + Y++ FR+ + + C +LS V Q R A+E+ +YF+ DDLPI GF+G +++ G P +K L+ H+ F + + DR+I +S R + PHSL Sbjct: 36 YKAGDPVILYVNKVGPYHNPQETYHYYQLPVCCPEKI-RHKSLSLGEVLDGDRMAESLYEIRFRENVEKRILCHMQLSSAQVEQLRQAIEELYYFEFVVDDLPIRGFVGYMEESGFL-PHSHKIGLWTHLDFHLEFRGDRIIFANVSVRDVKPHSL 189
BLAST of FC873768 vs. ExPASy Swiss-Prot
Match: TM9S1_BOVIN (Transmembrane 9 superfamily member 1 OS=Bos taurus GN=TM9SF1 PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.051e-32 Identity = 69/156 (44.23%), Postives = 101/156 (64.74%), Query Frame = 2 Query: 248 FKVGDPVPLYANKVGPFHNPSETYRYFDLPFCSPDAIIKEKREALGEVLNGDRLVSAPYKLNFRDEKDSALACRKKLSEQDVAQFRSAVEKDFYFQMYYDDLPIWGFIGKVDKEGKTHPSEYKYFLYKHIQFDILYNKDRVI--EISAR-MDPHSL 706 +K GDPV LY NKVGP+HNP ETY Y+ LP C P+ I + K +LGEVL+GDR+ + Y++ FR+ + + C +LS V Q R A+E+ +YF+ DDLPI GF+G +++ G P +K L+ H+ F + ++ DR+I +S R + PHSL Sbjct: 36 YKAGDPVILYVNKVGPYHNPQETYHYYQLPVCCPEKI-RHKSLSLGEVLDGDRMAESLYEIRFRENVEKRVLCHMQLSSAQVEQLRQAIEELYYFEFVVDDLPIRGFVGYMEESGFL-PHSHKIGLWTHLDFHLEFHGDRIIFANVSVRDVKPHSL 189
BLAST of FC873768 vs. ExPASy Swiss-Prot
Match: TM9S1_MOUSE (Transmembrane 9 superfamily member 1 OS=Mus musculus GN=Tm9sf1 PE=2 SV=2) HSP 1 Score: 139.813 bits (351), Expect = 1.373e-32 Identity = 69/156 (44.23%), Postives = 101/156 (64.74%), Query Frame = 2 Query: 248 FKVGDPVPLYANKVGPFHNPSETYRYFDLPFCSPDAIIKEKREALGEVLNGDRLVSAPYKLNFRDEKDSALACRKKLSEQDVAQFRSAVEKDFYFQMYYDDLPIWGFIGKVDKEGKTHPSEYKYFLYKHIQFDILYNKDRVI--EISAR-MDPHSL 706 +K GDPV LY NKVGP+HNP ETY Y+ LP C P+ I + K +LGEVL+GDR+ + Y++ FR+ + + C +LS V Q R A+E+ +YF+ DDLPI GF+G +++ G P +K L+ H+ F + ++ DR+I +S R + PHSL Sbjct: 36 YKPGDPVILYVNKVGPYHNPQETYHYYQLPVCCPEKI-RHKSLSLGEVLDGDRMAESLYEIRFRENVEKRILCHMQLSSAQVEQLRQAIEELYYFEFVVDDLPIRGFVGYMEESGFL-PHSHKIGLWTHLDFHLEFHGDRIIFANVSVRDVKPHSL 189
BLAST of FC873768 vs. ExPASy Swiss-Prot
Match: PHG1B_DICDI (Putative phagocytic receptor 1b OS=Dictyostelium discoideum GN=phg1b PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.518e-31 Identity = 67/170 (39.41%), Postives = 102/170 (60.00%), Query Frame = 2 Query: 173 ITLLVVGVLIACCLTHVRSDSSDHRFKVGDPVPLYANKVGPFHNPSETYRYFDLPFCSPDAIIKEKREALGEVLNGDRLVSAPYKLNFRDEKDSALACRKKLSEQDVAQFRSAVEKDFYFQMYYDDLPIWGFIGKVDKEGKTHPSEYKYFLYKHIQFDILYNKDRVIEIS 682 I L+ + +I + V S S+ H FK D VP Y N VGP+ NP+ETY ++ LPFC P +I K+ LGE+L GD V + Y+ F+ ++ C L ++D+ +F+ A+ + +Y +M YDDLPI+ F+G VD T+ +Y+LY HI F+ YN D+VI ++ Sbjct: 5 ILLIYLICIIVSSIVLVES-SNKHHFKENDEVPFYVNNVGPYSNPTETYEFYTLPFCKPSSI-SYKKTKLGEILQGDSAVLSDYQFPFKSSFENKQLCEYTLKKEDIEKFKKAIGEYYYAEMIYDDLPIFSFVGTVDDSDLTN---IRYYLYNHIPFEFDYNGDQVIRVN 169
BLAST of FC873768 vs. ExPASy Swiss-Prot
Match: TM9S3_HUMAN (Transmembrane 9 superfamily member 3 OS=Homo sapiens GN=TM9SF3 PE=1 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 3.065e-24 Identity = 55/163 (33.74%), Postives = 91/163 (55.83%), Query Frame = 2 Query: 197 LIACCLTHVRSDSSDHRFKVGDPVPLYANKVGPFHNPSETYRYFDLPFC-SPDAIIKEKREALGEVLNGDRLVSAPYKLNFRDEKDSALACRKKLSEQDVAQFRSAVEKDFYFQMYYDDLPIWGFIGKVDKEGKTHPSEYKYFLYKHIQFDILYNKDRVIEIS 682 L+ L R+D +H ++ + V L+ N VGP+HN ETY+YF LPFC I E LGE L G L + + F+D+ A C L ++ F A++ +++QMY DDLPIWG +G+ D+ G+ Y+L+ + + +I +N +R+++++ Sbjct: 18 LLLLLLPRTRADEHEHTYQDKEEVVLWMNTVGPYHNRQETYKYFSLPFCVGSKKSISHYHETLGEALQGVELEFSGLDIKFKDDVMPATYCEIDLDKEKRDAFVYAIKNHYWYQMYIDDLPIWGIVGEADENGE------DYYLWTYKKLEIGFNGNRIVDVN 174
BLAST of FC873768 vs. ExPASy Swiss-Prot
Match: TM9S3_MOUSE (Transmembrane 9 superfamily member 3 OS=Mus musculus GN=Tm9sf3 PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.003e-24 Identity = 55/163 (33.74%), Postives = 90/163 (55.21%), Query Frame = 2 Query: 197 LIACCLTHVRSDSSDHRFKVGDPVPLYANKVGPFHNPSETYRYFDLPFC-SPDAIIKEKREALGEVLNGDRLVSAPYKLNFRDEKDSALACRKKLSEQDVAQFRSAVEKDFYFQMYYDDLPIWGFIGKVDKEGKTHPSEYKYFLYKHIQFDILYNKDRVIEIS 682 L+ L RSD +H ++ + V L+ N VGP+HN ETY+YF LPFC I E LGE L G L + + F+D+ C L ++ F A++ +++QMY DDLPIWG +G+ D+ G+ Y+L+ + + +I +N +R+++++ Sbjct: 16 LLLLLLPRARSDEHEHTYQDKEEVVLWMNTVGPYHNRQETYKYFSLPFCVGSKKSISHYHETLGEALQGVELEFSGLDIKFKDDVMPGTYCEIDLDKEKRDAFVYAIKNHYWYQMYIDDLPIWGIVGEADENGE------DYYLWTYKKLEIGFNGNRIVDVN 172 The following BLAST results are available for this feature:
BLAST of FC873768 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873768 ID=FC873768; Name=FC873768; organism=Citrus clementina; type=EST; length=711bpback to top |