FC875336
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875336 vs. ExPASy Swiss-Prot
Match: DHRS2_HUMAN (Dehydrogenase/reductase SDR family member 2 OS=Homo sapiens GN=DHRS2 PE=1 SV=3) HSP 1 Score: 163.31 bits (412), Expect = 1.074e-39 Identity = 85/195 (43.59%), Postives = 118/195 (60.51%), Query Frame = 1 Query: 103 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ-KGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNCVAPGFVPTHFAQALLGNDA 681 +VAVVT ST GIG +A RL +GA VVISSRKQ+NVD+A+ KL+ G+ V GI+CHV + R+ L+ K +E G +D V +A VNP L T E + DK+ +NVKS LL+ P+M+ + +V+ +SSIA Y P A+ +Y V E+AP D RVNCV PG + T F++ GN++ Sbjct: 15 RVAVVTGSTSGIGFAIARRLARDGAHVVISSRKQQNVDRAMAKLQGEGLSVAGIVCHVGKAEDREQLVAKALEHCGGVDFLVCSAGVNPLVGSTLGTSEQIWDKILSVNVKSPALLLSQLLPYMENRRGAVILVSSIAAYNPVVALGVYNVSKTALLGLTRTLALELAPKDIRVNCVVPGIIKTDFSKVFHGNES 209
BLAST of FC875336 vs. ExPASy Swiss-Prot
Match: DHRS4_PIG (Dehydrogenase/reductase SDR family member 4 OS=Sus scrofa GN=DHRS4 PE=1 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.126e-39 Identity = 83/200 (41.50%), Postives = 121/200 (60.50%), Query Frame = 1 Query: 76 VNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNCVAPGFVPTHFAQAL 666 V K + KVA+VTAST GIGL +A RL +GA VV+SSRKQ+NVD+ V L+ G+ V G +CHV + R+ L+ V +G +D+ V NAAVNP+ +++ E V DK+ +NVK+++L+ + P M+K G SV+ +SS+ Y P + Y V E+AP + RVNC+APG + T+F+Q L Sbjct: 6 VERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVL 205
BLAST of FC875336 vs. ExPASy Swiss-Prot
Match: DHRS4_RABIT (Dehydrogenase/reductase SDR family member 4 OS=Oryctolagus cuniculus GN=DHRS4 PE=1 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 6.965e-39 Identity = 87/191 (45.55%), Postives = 119/191 (62.30%), Query Frame = 1 Query: 103 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEM-APDTRVNCVAPGFVPTHFAQAL 666 KVA+VTAST GIGL +A RL +GA VVISSRKQ+NVD+AV L+A G+ V G +CHV + R+ L+ + +G ID+ V NAAVNP+ L+ E V DK+ +INVK+ L+ + P M+K G SVV ++SIA + P S + Y V E+ A + RVNC+APG + T F++AL Sbjct: 15 KVAIVTASTDGIGLAIARRLAQDGAHVVISSRKQQNVDRAVAALQAEGLSVTGTVCHVGKAEDRERLVATALNLHGGIDILVSNAAVNPFFGKLMDVTEEVWDKILDINVKAMALMTKAVVPEMEKRGGGSVVIVASIAAFNPFSGLGPYNVSKTALVGLTKNLALELAAQNIRVNCLAPGLIKTSFSKAL 205
BLAST of FC875336 vs. ExPASy Swiss-Prot
Match: DHRS4_BOVIN (Dehydrogenase/reductase SDR family member 4 OS=Bos taurus GN=DHRS4 PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.647e-38 Identity = 86/205 (41.95%), Postives = 122/205 (59.51%), Query Frame = 1 Query: 67 MEKVNMAKR--FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMA-PDTRVNCVAPGFVPTHFAQAL 666 M MA+R KVA+VTAST GIG +A RL +GA VV+SSRKQ+NVD+AV LK G+ V G +CHV + R+ L+ V+ +G +D+ + NAAV+P+ L+ E V DK+ ++NVK++ LL + P M K G S+V +SSIA Y P ++ Y V E+A + RVNC+APG + T F++ L Sbjct: 1 MASCGMARRNPLDNKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDRAVATLKGEGLSVTGTVCHVGKAEDRERLVATAVKLHGGVDILISNAAVSPFFGSLMDVPEEVWDKILDVNVKATALLTKAVVPEMAKRGGGSIVIVSSIAAYSPFPSLGPYNVSKTALLGLTKNLALELAESNVRVNCLAPGLIRTSFSRVL 205
BLAST of FC875336 vs. ExPASy Swiss-Prot
Match: DHRS4_PONAB (Dehydrogenase/reductase SDR family member 4 OS=Pongo abelii GN=DHRS4 PE=2 SV=2) HSP 1 Score: 157.918 bits (398), Expect = 4.514e-38 Identity = 85/191 (44.50%), Postives = 116/191 (60.73%), Query Frame = 1 Query: 103 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNCVAPGFVPTHFAQAL 666 KVA+VTAST GIG +A RL +GA VV+SSRKQ+NVD+AV L+ G+ V G +CHV + R+ L+ V+ +G ID+ V NAAVNP+ L+ E V DK +INVK+ L+ + P M+K G SVV +SSIA + P + Y V E+AP + RVNC+APG + T F++ L Sbjct: 15 KVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTGTVCHVGKAEDRERLVATAVKLHGGIDILVSNAAVNPFFGSLMDVTEEVWDKTLDINVKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRNIRVNCLAPGLIKTSFSRML 205
BLAST of FC875336 vs. ExPASy Swiss-Prot
Match: DHRS4_HUMAN (Dehydrogenase/reductase SDR family member 4 OS=Homo sapiens GN=DHRS4 PE=1 SV=2) HSP 1 Score: 157.147 bits (396), Expect = 7.700e-38 Identity = 84/191 (43.98%), Postives = 116/191 (60.73%), Query Frame = 1 Query: 103 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNCVAPGFVPTHFAQAL 666 KVA+VTAST GIG +A RL +GA VV+SSRKQ+NVD+AV L+ G+ V G +CHV + R+ L+ V+ +G ID+ V NAAVNP+ ++ E V DK +INVK+ L+ + P M+K G SVV +SSIA + P + Y V E+AP + RVNC+APG + T F++ L Sbjct: 15 KVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTGTVCHVGKAEDRERLVATAVKLHGGIDILVSNAAVNPFFGSIMDVTEEVWDKTLDINVKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRNIRVNCLAPGLIKTSFSRML 205
BLAST of FC875336 vs. ExPASy Swiss-Prot
Match: DHRS4_RAT (Dehydrogenase/reductase SDR family member 4 OS=Rattus norvegicus GN=Dhrs4 PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.715e-37 Identity = 83/191 (43.46%), Postives = 121/191 (63.35%), Query Frame = 1 Query: 103 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNCVAPGFVPTHFAQAL 666 KVA+VTAST GIGL +A RL +GA VVISSRKQ+NVD+AV L+ G+ V G++CHV + R+ L++ ++ + ID+ V NAAVNP+ +L+ E V +K+ INV +S ++++ P M+K G SVV +SS+AG+ ++ Y V E+AP + RVNC+APG + THF+ L Sbjct: 15 KVALVTASTDGIGLAIARRLAEDGAHVVISSRKQQNVDRAVATLQGEGLSVTGVVCHVGKAEDREKLVNMALKLHQGIDILVSNAAVNPFFGNLMDVTEEVWNKVLSINVTASAMMIKAVVPAMEKRGGGSVVIVSSVAGFVLFPSLGPYNVSKTALLGLTKNFAAELAPKNIRVNCLAPGLIKTHFSSVL 205
BLAST of FC875336 vs. ExPASy Swiss-Prot
Match: DHRS4_MOUSE (Dehydrogenase/reductase SDR family member 4 OS=Mus musculus GN=Dhrs4 PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.112e-36 Identity = 81/191 (42.41%), Postives = 118/191 (61.78%), Query Frame = 1 Query: 103 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNCVAPGFVPTHFAQAL 666 KVA+VTAST GIG +A RL +GA VV+SSRKQ+NVD+AV L+ G+ V GI+CHV + R+ LI ++++ ID+ V NAAVNP+ +L+ E V DK+ INV ++ ++++ P M+K G SVV + S+AG+ ++ Y V E+AP + RVNC+APG + T F+ L Sbjct: 15 KVALVTASTDGIGFAIARRLAEDGAHVVVSSRKQQNVDRAVATLQGEGLSVTGIVCHVGKAEDREKLITTALKRHRGIDILVSNAAVNPFFGNLMDVTEEVWDKVLSINVTATAMMIKAVVPEMEKRGGGSVVIVGSVAGFTRFPSLGPYNVSKTALLGLTKNFAAELAPKNIRVNCLAPGLIKTRFSSVL 205
BLAST of FC875336 vs. ExPASy Swiss-Prot
Match: DR4L2_HUMAN (Dehydrogenase/reductase SDR family member 4-like 2 OS=Homo sapiens GN=DHRS4L2 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.563e-33 Identity = 80/194 (41.24%), Postives = 112/194 (57.73%), Query Frame = 1 Query: 61 IQMEKVNMAKR--FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNCV 627 +++ M +R KVA+VTAST GIG +A RL + A VV+SSRKQ+NVD+AV L+ G+ V G +CHV + R+ L+ V+ +G ID+ V NAAVNP+ L+ E V DK +INVK+ L+ + P M+K G SVV +SSIA + P + Y V E+AP + RVNC+ Sbjct: 15 VRLASSRMTRRDPLTNKVALVTASTDGIGFAIARRLAQDRAHVVVSSRKQQNVDQAVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVKLHGGIDILVSNAAVNPFFGSLMDVTEEVWDKTLDINVKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLNNTLAIELAPRNIRVNCL 208
BLAST of FC875336 vs. ExPASy Swiss-Prot
Match: Y182_METEA (Uncharacterized oxidoreductase MexAM1_META1p0182 OS=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) GN=MexAM1_META1p0182 PE=3 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 2.489e-20 Identity = 61/188 (32.45%), Postives = 102/188 (54.26%), Query Frame = 1 Query: 91 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQK-NVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNCVAPGFVPT 648 + +GKVAVVT +++GIG +A+ L +GA+VV++ K D VE + A G + I + VS + L++ V+++GR+DV V N+ V +AA + + E +++++NV +L Q A+ H+ +G S++ ISS+ A+Y E+AP RVN V+PG+V T Sbjct: 3 KLEGKVAVVTGASKGIGAAIAKALAKDGAAVVVNYASSKAGADAVVEAITAAGGKAIAVQADVSQAVQARGLVEAAVQQFGRLDVLVNNSGVYEFAA-IEEVTEEHYRRIFDVNVLGVLLATQAASKHLGEGGSIINISSVVTDVLMPTSAVYSGTKGALNAISGVLANELAPRKIRVNVVSPGYVVT 189 The following BLAST results are available for this feature:
BLAST of FC875336 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875336 ID=FC875336; Name=FC875336; organism=Citrus clementina; type=EST; length=683bpback to top |