FC875373
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875373 vs. ExPASy Swiss-Prot
Match: IMA1_ARATH (Importin subunit alpha-1 OS=Arabidopsis thaliana GN=KAP1 PE=2 SV=2) HSP 1 Score: 246.128 bits (627), Expect = 1.398e-64 Identity = 123/154 (79.87%), Postives = 135/154 (87.66%), Query Frame = 3 Query: 3 PLVNLLQNAEFDIKKEAAWAISNATSGGTHEQIKYLVREGCIKPLCDLFVCPDPRIVTVCLEGLENILKVGEAEKNMGTATADVNQYAQLVEEAEGLEKIENLQSHDNNEIYEKAVKILETYWL-EEDDET--IAAGDGPQPGFPYAGNEVQVP 455 PLV+LLQNAEFDIKKEAAWAISNATSGG+H+QIKYLV +GCIKPLCDL VCPDPRI+TVCLEGLENILKVGEAEKN+G T D+N YAQL+++AEGLEKIENLQSHDNNEIYEKAVKILETYWL EEDDET DG Q GF + GN+ VP Sbjct: 373 PLVSLLQNAEFDIKKEAAWAISNATSGGSHDQIKYLVEQGCIKPLCDLLVCPDPRIITVCLEGLENILKVGEAEKNLG-HTGDMNYYAQLIDDAEGLEKIENLQSHDNNEIYEKAVKILETYWLEEEDDETQQPPGVDGSQAGFQFGGNQAPVP 525
BLAST of FC875373 vs. ExPASy Swiss-Prot
Match: IMA1B_ORYSJ (Importin subunit alpha-1b OS=Oryza sativa subsp. japonica GN=Os05g0155500 PE=1 SV=2) HSP 1 Score: 241.891 bits (616), Expect = 2.637e-63 Identity = 115/151 (76.16%), Postives = 131/151 (86.75%), Query Frame = 3 Query: 3 PLVNLLQNAEFDIKKEAAWAISNATSGGTHEQIKYLVREGCIKPLCDLFVCPDPRIVTVCLEGLENILKVGEAEKNMGTATADVNQYAQLVEEAEGLEKIENLQSHDNNEIYEKAVKILETYWLEEDDETIAAGDGPQPGFPYAGNEVQVP 455 PLV+LLQ AEFDIKKEAAWAISNATSGGTH+QIKYLV +GCIKPLCDL VCPDPRIVTVCLEGLENILKVGEAEKN+G DVN YAQ++++AEGLEKIENLQSHDN EIYEKAVK+LE+YWLEE+D+ + +GD Q GF + + VP Sbjct: 379 PLVHLLQTAEFDIKKEAAWAISNATSGGTHDQIKYLVAQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLG--AGDVNSYAQMIDDAEGLEKIENLQSHDNTEIYEKAVKMLESYWLEEEDDAMPSGDNAQNGFNFGNQQPNVP 527
BLAST of FC875373 vs. ExPASy Swiss-Prot
Match: IMA_SOLLC (Importin subunit alpha OS=Solanum lycopersicum PE=2 SV=2) HSP 1 Score: 226.098 bits (575), Expect = 1.497e-58 Identity = 110/151 (72.85%), Postives = 128/151 (84.77%), Query Frame = 3 Query: 3 PLVNLLQNAEFDIKKEAAWAISNATSGGTHEQIKYLVREGCIKPLCDLFVCPDPRIVTVCLEGLENILKVGEAEKNMGTATADVNQYAQLVEEAEGLEKIENLQSHDNNEIYEKAVKILETYWLEEDDETIAAGDGPQPGFPYAGNEVQVP 455 PLV LLQNAEF+IKKEAAWAISNATSGG H+QIK+LV +GCIKPLCDL VCPDPRIVTVCLEGLENILK+GEA+K++G T VN YAQL++EAEGLEKIENLQSHDN EIYEKAVKILETYWLEE+D ++ + F + G ++ +P Sbjct: 374 PLVYLLQNAEFEIKKEAAWAISNATSGGNHDQIKFLVSQGCIKPLCDLLVCPDPRIVTVCLEGLENILKIGEADKDLGN-TEGVNVYAQLIDEAEGLEKIENLQSHDNTEIYEKAVKILETYWLEEEDVPVSLNEDQ---FEFGGADISLP 520
BLAST of FC875373 vs. ExPASy Swiss-Prot
Match: IMA1A_ORYSJ (Importin subunit alpha-1a OS=Oryza sativa subsp. japonica GN=Os01g0253300 PE=1 SV=2) HSP 1 Score: 221.09 bits (562), Expect = 4.817e-57 Identity = 105/133 (78.95%), Postives = 120/133 (90.23%), Query Frame = 3 Query: 3 PLVNLLQNAEFDIKKEAAWAISNATSGGTHEQIKYLVREGCIKPLCDLFVCPDPRIVTVCLEGLENILKVGEAEKNMGTATADVNQYAQLVEEAEGLEKIENLQSHDNNEIYEKAVKILETYWLEEDDETIAA 401 PLVNLLQ AEFDIKKEAAWAISNATSGG+H+QIKYLV EGCIKPLCDL +CPD RIVTVCLEGLENILKVGE +K + A DVN ++Q+++EAEGLEKIENLQSHDNNEIYEKAVKILE YW++E+D+T+ A Sbjct: 373 PLVNLLQTAEFDIKKEAAWAISNATSGGSHDQIKYLVSEGCIKPLCDLLICPDIRIVTVCLEGLENILKVGETDKTL--AAGDVNVFSQMIDEAEGLEKIENLQSHDNNEIYEKAVKILEAYWMDEEDDTMGA 503
BLAST of FC875373 vs. ExPASy Swiss-Prot
Match: IMA2_ARATH (Importin subunit alpha-2 OS=Arabidopsis thaliana GN=KAP2 PE=1 SV=2) HSP 1 Score: 202.216 bits (513), Expect = 2.316e-51 Identity = 98/148 (66.22%), Postives = 120/148 (81.08%), Query Frame = 3 Query: 6 LVNLLQNAEFDIKKEAAWAISNATSGGTHEQIKYLVREGCIKPLCDLFVCPDPRIVTVCLEGLENILKVGEAEKNMGTATADVNQYAQLVEEAEGLEKIENLQSHDNNEIYEKAVKILETYWLEE-DDETIAAGDGPQPGFPYAGNEV 446 LV +LQ+AEF++KKEAAW ISNATSGGTH+QIK++V +GCIKPLCDL CPD ++VTVCLE LENIL VGEAEKN+G T + N YAQ+++EAEGLEKIENLQSHDNN+IY+KAVKILET+W E+ ++E PQ GF + V Sbjct: 377 LVWVLQSAEFEVKKEAAWGISNATSGGTHDQIKFMVSQGCIKPLCDLLTCPDLKVVTVCLEALENILVVGEAEKNLG-HTGEDNLYAQMIDEAEGLEKIENLQSHDNNDIYDKAVKILETFWTEDNEEEGNDENHAPQSGFQFGSTNV 523
BLAST of FC875373 vs. ExPASy Swiss-Prot
Match: IMA1_CHICK (Importin subunit alpha-1 OS=Gallus gallus GN=KPNA1 PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.589e-36 Identity = 77/132 (58.33%), Postives = 97/132 (73.48%), Query Frame = 3 Query: 6 LVNLLQNAEFDIKKEAAWAISNATSGGTHEQIKYLVREGCIKPLCDLFVCPDPRIVTVCLEGLENILKVGEAEKNMGTATADVNQYAQLVEEAEGLEKIENLQSHDNNEIYEKAVKILETYWLEEDDETIAA 401 L+N+LQ AEF +KEAAWAI+NATSGG+ EQIKYLV GCIKPLCDL D +IV V L GLENIL++GE E + A +N Y L+EEA GL+KIE LQSH+N EIY+KA ++E Y+ ED+++ A Sbjct: 385 LINILQTAEFRTRKEAAWAITNATSGGSAEQIKYLVELGCIKPLCDLLTVMDSKIVQVALSGLENILRLGEQESK--RSGAGINPYCALIEEAYGLDKIEFLQSHENQEIYQKAFDLIEHYFGTEDEDSSIA 514
BLAST of FC875373 vs. ExPASy Swiss-Prot
Match: IMA1_PONAB (Importin subunit alpha-1 OS=Pongo abelii GN=KPNA1 PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.364e-35 Identity = 78/133 (58.65%), Postives = 98/133 (73.68%), Query Frame = 3 Query: 6 LVNLLQNAEFDIKKEAAWAISNATSGGTHEQIKYLVREGCIKPLCDLFVCPDPRIVTVCLEGLENILKVGEAE-KNMGTATADVNQYAQLVEEAEGLEKIENLQSHDNNEIYEKAVKILETYWLEEDDETIAA 401 L+++LQ AEF +KEAAWAI+NATSGG+ EQIKYLV GCIKPLCDL D +IV V L GLENIL++GE E K GT +N Y L+EEA GL+KIE LQSH+N EIY+KA ++E Y+ ED+++ A Sbjct: 385 LISILQTAEFRTRKEAAWAITNATSGGSAEQIKYLVELGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQEAKRNGTG---INPYCALIEEAYGLDKIEFLQSHENQEIYQKAFDLIEHYFGTEDEDSSIA 514
BLAST of FC875373 vs. ExPASy Swiss-Prot
Match: IMA1_HUMAN (Importin subunit alpha-1 OS=Homo sapiens GN=KPNA1 PE=1 SV=2) HSP 1 Score: 149.828 bits (377), Expect = 1.364e-35 Identity = 78/133 (58.65%), Postives = 98/133 (73.68%), Query Frame = 3 Query: 6 LVNLLQNAEFDIKKEAAWAISNATSGGTHEQIKYLVREGCIKPLCDLFVCPDPRIVTVCLEGLENILKVGEAE-KNMGTATADVNQYAQLVEEAEGLEKIENLQSHDNNEIYEKAVKILETYWLEEDDETIAA 401 L+++LQ AEF +KEAAWAI+NATSGG+ EQIKYLV GCIKPLCDL D +IV V L GLENIL++GE E K GT +N Y L+EEA GL+KIE LQSH+N EIY+KA ++E Y+ ED+++ A Sbjct: 385 LISILQTAEFRTRKEAAWAITNATSGGSAEQIKYLVELGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQEAKRNGTG---INPYCALIEEAYGLDKIEFLQSHENQEIYQKAFDLIEHYFGTEDEDSSIA 514
BLAST of FC875373 vs. ExPASy Swiss-Prot
Match: IMA1_BOVIN (Importin subunit alpha-1 OS=Bos taurus GN=KPNA1 PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.364e-35 Identity = 78/133 (58.65%), Postives = 98/133 (73.68%), Query Frame = 3 Query: 6 LVNLLQNAEFDIKKEAAWAISNATSGGTHEQIKYLVREGCIKPLCDLFVCPDPRIVTVCLEGLENILKVGEAE-KNMGTATADVNQYAQLVEEAEGLEKIENLQSHDNNEIYEKAVKILETYWLEEDDETIAA 401 L+++LQ AEF +KEAAWAI+NATSGG+ EQIKYLV GCIKPLCDL D +IV V L GLENIL++GE E K GT +N Y L+EEA GL+KIE LQSH+N EIY+KA ++E Y+ ED+++ A Sbjct: 385 LISILQTAEFRTRKEAAWAITNATSGGSAEQIKYLVELGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQEAKRNGTG---INPYCALIEEAYGLDKIEFLQSHENQEIYQKAFDLIEHYFGTEDEDSSIA 514
BLAST of FC875373 vs. ExPASy Swiss-Prot
Match: IMA7_PONAB (Importin subunit alpha-7 OS=Pongo abelii GN=KPNA6 PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.781e-35 Identity = 79/133 (59.40%), Postives = 99/133 (74.44%), Query Frame = 3 Query: 6 LVNLLQNAEFDIKKEAAWAISNATSGGTHEQIKYLVREGCIKPLCDLFVCPDPRIVTVCLEGLENILKVGEAE-KNMGTATADVNQYAQLVEEAEGLEKIENLQSHDNNEIYEKAVKILETYW-LEEDDETIA 398 L+ +LQ AEF +KEAAWAI+NATSGGT EQI+YLV GCIKPLCDL D +IV V L GLENIL++GE E K G+ VN Y L+EEA GL+KIE LQSH+N EIY+KA ++E Y+ +E+DD ++A Sbjct: 383 LIEILQKAEFRTRKEAAWAITNATSGGTPEQIRYLVSLGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQEGKRSGSG---VNPYCGLIEEAYGLDKIEFLQSHENQEIYQKAFDLIEHYFGVEDDDSSLA 512 The following BLAST results are available for this feature:
BLAST of FC875373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875373 ID=FC875373; Name=FC875373; organism=Citrus clementina; type=EST; length=726bpback to top |