FC875547
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875547 vs. ExPASy Swiss-Prot
Match: ATPD_TOBAC (ATP synthase delta chain, chloroplastic OS=Nicotiana tabacum GN=ATPD PE=2 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 7.749e-49 Identity = 98/153 (64.05%), Postives = 126/153 (82.35%), Query Frame = 3 Query: 231 RRRGAHGIRMSATVATSYAIALVDLAKANNTLESTSADVEKIEKIFSEKQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVM 689 R GA G +M A+ A SYA AL D+AK+N TLE T+AD+EKIEKI ++ + FFV+P + EKKRE+VDEI SS++QP NFLNIL+D KRV+++K+IVKEFE+VYN +T+TE+AVV+SVVKLES+HLAQIAK VQ+LTG+KNVRIKTV+ Sbjct: 52 RGGGAAGSKMVASAAGSYANALADIAKSNGTLEQTTADLEKIEKISDDEAVFNFFVSPIVGEEKKRELVDEIVSSSSIQPHVANFLNILVDMKRVELIKEIVKEFEKVYNTLTDTELAVVTSVVKLESQHLAQIAKGVQRLTGSKNVRIKTVI 204
BLAST of FC875547 vs. ExPASy Swiss-Prot
Match: ATPD_SPIOL (ATP synthase delta chain, chloroplastic OS=Spinacia oleracea GN=ATPD PE=1 SV=2) HSP 1 Score: 186.422 bits (472), Expect = 1.237e-46 Identity = 100/193 (51.81%), Postives = 138/193 (71.50%), Query Frame = 3 Query: 126 VSLQQTATLSLQSNLFPSGRAASRNPLSATIPSGPR-----RRGAHGIRMSATVATSYAIALVDLAKANNTLESTSADVEKIEKIFSEKQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVM 689 +S T + +L S A+ NPL I + + R GA G RM + A+ YA AL D+A TLE+T++DVEK+ +IFSE+ ++ FF NP I I+ KR ++DEI +S LQP T NF+NILID++R+++VK+I+ EFE+V+NK+T TE+AVV+SVVKLE++HLAQIAK VQK+TGAKNVRIKTV+ Sbjct: 21 LSTSSTTSTPKPFSLSFSSSTATFNPLRLKILTASKLTAKPRGGALGTRMVDSTASRYASALADVADVTGTLEATNSDVEKLIRIFSEEPVYYFFANPVISIDNKRSVLDEIITTSGLQPHTANFINILIDSERINLVKEILNEFEDVFNKITGTEVAVVTSVVKLENDHLAQIAKGVQKITGAKNVRIKTVI 213
BLAST of FC875547 vs. ExPASy Swiss-Prot
Match: ATPD_PEA (ATP synthase delta chain, chloroplastic OS=Pisum sativum GN=ATPD PE=1 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.512e-44 Identity = 96/189 (50.79%), Postives = 133/189 (70.37%), Query Frame = 3 Query: 132 LQQTATLSLQSNLFPSGRAASRNPLSATIPSGPRRR---GAHGIRMSATVATSYAIALVDLAKANNTLESTSADVEKIEKIFSEKQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVM 689 L + L+L S+ F S + L +P RR GA G RMS+ A SYA AL DLA +NNTL++ +AD +KIE++FS+ ++ ++F +P ++ KR+++ E +S QP T NFLN+LID+KR+D++ DI+KEFE VYN +T+TE+ VV+SVVKLES HLAQIAKQVQKLTGAK VR KT++ Sbjct: 23 LTRKPILNLSSSTFYSPKLK----LKLKLPLTKTRRSTGGALGARMSSLAAGSYAAALADLANSNNTLDAITADFDKIEQLFSDPKVFDYFSSPIVEDSTKRQLIGEFATTSGFQPHTHNFLNVLIDSKRIDMIIDIIKEFEFVYNTLTDTELVVVTSVVKLESHHLAQIAKQVQKLTGAKKVRTKTLL 207
BLAST of FC875547 vs. ExPASy Swiss-Prot
Match: ATPD_SORBI (ATP synthase delta chain, chloroplastic OS=Sorghum bicolor GN=ATPD PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.791e-37 Identity = 87/185 (47.03%), Postives = 123/185 (66.49%), Query Frame = 3 Query: 144 ATLSLQSNLFPSG-RAASRNPLSATIPS----GPRRRGAHGIRMSATVATSYAIALVDLAKANNTLESTSADVEKIEKIFSEKQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKT 683 A S S P+ R+AS + +PS PRRRG + A SYA AL ++A N TLE T +D+EK++KIF+++ + EFF NPT+ E+K ++DEI KS LQP NF+N+++D R ++ +IV EFE ++N +T TE+A V+SVV+LES+ LAQIA+ VQK+TGAKNVR+KT Sbjct: 17 AAASASSGATPAAPRSASFARAARGLPSLRLAPPRRRGDLVRPRAEAAADSYASALSEVAVENGTLEQTVSDLEKLQKIFADETVAEFFDNPTVPREEKTALIDEIAKSYELQPHVVNFINVVVDNFRATILPEIVVEFENIFNSLTGTEVATVTSVVQLESQDLAQIAQHVQKMTGAKNVRLKT 201
BLAST of FC875547 vs. ExPASy Swiss-Prot
Match: ATPD_CHLRE (ATP synthase delta chain, chloroplastic OS=Chlamydomonas reinhardtii GN=ATPD PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.592e-23 Identity = 55/141 (39.01%), Postives = 94/141 (66.67%), Query Frame = 3 Query: 270 VATSYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVM 689 V+ SYA ALV+LA LE+ ADV+ + + E ++ +NP ++ +KKR ++ +I K + Q T N+LN+L++ R+ +V +I + FE++Y +MT+T++A + S VKLE E IAK++Q+LTG+KN+++K V+ Sbjct: 38 VSESYAKALVELADEKGKLEAVHADVDAVAGLMKENAKLSALIMNPVVESDKKRAVLAKIAKEAGFQQYTINWLNLLVEKDRLSLVPEICECFEDLYCQMTDTQVATLRSAVKLEQEQQFLIAKKLQELTGSKNIKLKPVI 178
BLAST of FC875547 vs. ExPASy Swiss-Prot
Match: ATPD_MICAN (ATP synthase subunit delta OS=Microcystis aeruginosa (strain NIES-843) GN=atpH PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.246e-13 Identity = 42/146 (28.77%), Postives = 82/146 (56.16%), Query Frame = 3 Query: 249 GIRMSATVATSYAIALVDLAKANNTLESTSADVEKI-EKIFSEKQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKT 683 G +S+ +A YA AL+ +A+++ LE+ +++ + E + + + F NP I E K+ ++ ++ SSA P NF+ +L+D +R+ ++ + +++ + +TNT +A VSS +L + +V+ LTGA V +KT Sbjct: 3 GSLISSEIAEPYAQALLSVAQSSGQLEAIGGEIKSLLELLENAPDLRAFIGNPVIKEEAKKAVLSQVMGSSA-NPYLTNFMMLLVDKRRIQFLEPVCQQYLTLARVLTNTVLAEVSSATELNDSQKQIVIDKVKTLTGANVVELKT 147
BLAST of FC875547 vs. ExPASy Swiss-Prot
Match: ATPD_CYAP7 (ATP synthase subunit delta OS=Cyanothece sp. (strain PCC 7424) GN=atpH PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.246e-13 Identity = 40/145 (27.59%), Postives = 78/145 (53.79%), Query Frame = 3 Query: 249 GIRMSATVATSYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIK 680 G +S +A YA AL+ ++++NN E D+ + + + ++ EF NP I E K+E++ I P NFL +L+D +R+ ++ + +++ + ++TNT +A V S +L E + +V+ ++GA+ V +K Sbjct: 3 GSSLSLEIAEPYAQALMSVSQSNNLTERFGEDIRSLLDLLNNSPELREFLSNPVIREENKKEILQRIMGDQT-HPYLRNFLMLLVDKRRIAFLEQVCEQYLALLRQLTNTVLAEVVSATELNDEQRQSVIDKVKTISGAQAVELK 146
BLAST of FC875547 vs. ExPASy Swiss-Prot
Match: ATPD_BACWK (ATP synthase subunit delta OS=Bacillus weihenstephanensis (strain KBAB4) GN=atpH PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.246e-13 Identity = 45/141 (31.91%), Postives = 74/141 (52.48%), Query Frame = 3 Query: 270 VATSYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVM 689 VA YA+AL +AK + LE ++ ++ +F++ ++H F P I E+K+ + + S + L N L ILID KR+D++ +I E+ + N+ N A V S+ L E IA+ K TG +R+K V+ Sbjct: 6 VAKRYAVALFKIAKEKHVLEMFEEELRLVQNVFTKNGELHSFLTQPNISKEQKKTFLANVFASVSESIL--NTLYILIDNKRIDILPEIANEYVVLANEERNVADATVYSIRLLSEEEKLNIAEAFAKKTGKDAIRVKNVV 144
BLAST of FC875547 vs. ExPASy Swiss-Prot
Match: ATPD_BACHK (ATP synthase subunit delta OS=Bacillus thuringiensis subsp. konkukian GN=atpH PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.169e-12 Identity = 45/141 (31.91%), Postives = 72/141 (51.06%), Query Frame = 3 Query: 270 VATSYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVM 689 VA YA+AL +AK + LE ++ ++ ++ + ++H F P I E+K+ + + S + L N L ILID KR+D++ DI E+ + N+ N A V S L E IA+ K TG +R+K V+ Sbjct: 6 VAKRYAVALFKIAKEKHVLEMFEEELRLVQNVYEKNGELHSFLTQPNISKEQKKTFLANVFGSVSESIL--NTLYILIDNKRIDILSDIANEYVVLANEERNVADATVYSTRLLSEEEKLNIAEAFAKRTGKDAIRVKNVV 144
BLAST of FC875547 vs. ExPASy Swiss-Prot
Match: ATPD_BACCZ (ATP synthase subunit delta OS=Bacillus cereus (strain ZK / E33L) GN=atpH PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.169e-12 Identity = 45/141 (31.91%), Postives = 72/141 (51.06%), Query Frame = 3 Query: 270 VATSYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVM 689 VA YA+AL +AK + LE ++ ++ ++ + ++H F P I E+K+ + + S + L N L ILID KR+D++ DI E+ + N+ N A V S L E IA+ K TG +R+K V+ Sbjct: 6 VAKRYAVALFKIAKEKHVLEMFEEELRLVQNVYEKNGELHSFLTQPNISKEQKKTFLANVFGSVSESIL--NTLYILIDNKRIDILSDIANEYVVLANEERNVADATVYSTRLLSEEEKLNIAEAFAKRTGKDAIRVKNVV 144 The following BLAST results are available for this feature:
BLAST of FC875547 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875547 ID=FC875547; Name=FC875547; organism=Citrus clementina; type=EST; length=699bpback to top |