FC875561
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875561 vs. ExPASy Swiss-Prot
Match: HMT1_ARATH (Homocysteine S-methyltransferase 1 OS=Arabidopsis thaliana GN=HMT-1 PE=1 SV=1) HSP 1 Score: 343.584 bits (880), Expect = 6.537e-94 Identity = 167/217 (76.96%), Postives = 189/217 (87.10%), Query Frame = 3 Query: 66 LDDLIEKAGGCAVIDGGFATQLETHGASINDPLWSALYLIKQPHLVKRVHLEYLEAGADILVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKXXXXXXXXXXXXXNIQIPSWICFSSVDGENAPSGESFKDALD 716 L+DLI+K GGCAV+DGGFATQLE HGA+INDPLWSA+ LIK P L+KRVH+EYLEAGADI+VTSSYQATIPGFLSRGLSIEE+ESLL+KSV LAVEARD+FW+ V KV GH+YNRALVAASIGSYGAYLADGSEYSG+YG V L+KLKDFHRRRLQVLVE+GPDLLAFETIPNK +QIP+WICF+SVDGE APSGESF++ L+ Sbjct: 10 LEDLIKKCGGCAVVDGGFATQLEIHGAAINDPLWSAVSLIKNPELIKRVHMEYLEAGADIVVTSSYQATIPGFLSRGLSIEESESLLQKSVELAVEARDRFWEKVSKVSGHSYNRALVAASIGSYGAYLADGSEYSGHYGENVSLDKLKDFHRRRLQVLVEAGPDLLAFETIPNKLEAQACVELLEEEKVQIPAWICFTSVDGEKAPSGESFEECLE 226
BLAST of FC875561 vs. ExPASy Swiss-Prot
Match: HMT1_MAIZE (Homocysteine S-methyltransferase 1 OS=Zea mays GN=HMT-1 PE=2 SV=1) HSP 1 Score: 296.975 bits (759), Expect = 7.016e-80 Identity = 146/218 (66.97%), Postives = 170/218 (77.98%), Query Frame = 3 Query: 66 LDDLIEKAGGCAVIDGGFATQLETHGASINDPLWSALYLIKQPHLVKRVHLEYLEAGADILVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKXXXXXXXXXXXXXNIQIPSWICFSSVDGENAPSGESFKDALDI 719 L+DL+ +AGGCAVIDGGFATQLE GA INDPLWSA LI +PHLVK VH++YLEAGAD++++SSYQATIPGF++RG+S+ EAE LL SV LA EARD+FW + + YNRALVAASIGSYGAYLADGSEYSG+YG + EKLKDFHRRRLQVL +GPDL+AFE IPN+ +QIPSWICFSSVDG+N SGESF D L I Sbjct: 4 LEDLVARAGGCAVIDGGFATQLEALGADINDPLWSAACLITRPHLVKEVHMQYLEAGADVIISSSYQATIPGFIARGMSVAEAEDLLRTSVKLANEARDEFWKSTLRKSKPIYNRALVAASIGSYGAYLADGSEYSGSYGADITAEKLKDFHRRRLQVLASAGPDLIAFEAIPNQMEAQALVELLEEEKVQIPSWICFSSVDGKNLCSGESFADCLKI 221
BLAST of FC875561 vs. ExPASy Swiss-Prot
Match: HMT2_ARATH (Homocysteine S-methyltransferase 2 OS=Arabidopsis thaliana GN=HMT-2 PE=1 SV=1) HSP 1 Score: 247.669 bits (631), Expect = 4.882e-65 Identity = 128/231 (55.41%), Postives = 160/231 (69.26%), Query Frame = 3 Query: 60 SSLDDLIEKAGGCAVIDGGFATQLETHGASINDPLWSALYLIKQPHLVKRVHLEYLEAGADILVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWD-----------AVKKVPGHNYNRALVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKXXXXXXXXXXXXXNIQIPSWICFSSVDGENAPSGESFKDALDI 719 +S+ D +++ GG AVIDGG AT+ E HGA +NDPLWSA L+ PHL+ VHL+YLEAGADI+ ++SYQATI GF ++G S EE+ESLL+KSV +A EAR+ ++D +KK P LVAAS+GSYGAYLADGSEYSG YG + LEKLKDFHRRRLQVL ESG DL+AFETIPNK +++IP W F+S DG N SG+S K+ + I Sbjct: 7 NSMKDFLKQTGGYAVIDGGLATEFERHGADLNDPLWSAKCLVTSPHLIHTVHLDYLEAGADIISSASYQATIQGFEAKGFSREESESLLKKSVEIATEARNSYYDKCGTSSSMDDKILKKRP------ILVAASVGSYGAYLADGSEYSGIYGDSITLEKLKDFHRRRLQVLAESGADLIAFETIPNKIEAQAFADLLEEGDVKIPGWFSFNSKDGVNVVSGDSIKECISI 231
BLAST of FC875561 vs. ExPASy Swiss-Prot
Match: HMT3_ARATH (Homocysteine S-methyltransferase 3 OS=Arabidopsis thaliana GN=HMT3 PE=1 SV=2) HSP 1 Score: 243.817 bits (621), Expect = 7.049e-64 Identity = 125/222 (56.31%), Postives = 158/222 (71.17%), Query Frame = 3 Query: 54 TASSLDDLIEKAGGCAVIDGGFATQLETHGASINDPLWSALYLIKQPHLVKRVHLEYLEAGADILVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKK------VPGHNYNR-ALVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKXXXXXXXXXXXXXNIQIPSWICFSSVDGENAPSGES 698 T+S + D +EK GG AV+DGGFAT+L+ HGA INDPLWSA LI PHLV +VHL+YLE+GA+I++T+SYQATI GF+++GLS+ EAE+LL +SV + EAR+ F++ K G R LVAAS+GSYGAYLADGSEYSG YG V E LKDFHRRR+Q+L +SG DL+AFETIPNK +I IP+W F+S DG + P G+S Sbjct: 9 TSSLMTDFLEKCGGYAVVDGGFATELQRHGADINDPLWSAKCLITSPHLVTKVHLDYLESGANIIITASYQATIQGFVAKGLSVGEAENLLRRSVEITYEAREIFYNRCTKGSWDFAYAGKASRRPILVAASVGSYGAYLADGSEYSGIYGDSVSKETLKDFHRRRVQILAKSGADLIAFETIPNKLEAEAYADLLEEEDIDIPAWFSFTSKDGVSVPRGDS 230
BLAST of FC875561 vs. ExPASy Swiss-Prot
Match: HMT3_MAIZE (Homocysteine S-methyltransferase 3 OS=Zea mays GN=HMT-3 PE=2 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 5.585e-61 Identity = 118/214 (55.14%), Postives = 153/214 (71.50%), Query Frame = 3 Query: 78 IEKAGGCAVIDGGFATQLETHGASINDPLWSALYLIKQPHLVKRVHLEYLEAGADILVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKXXXXXXXXXXXXXNIQIPSWICFSSVDGENAPSGESFKDALDI 719 ++ AGG V+DGG AT+LE +GA +NDPLWSA L+ PHL+++VH++YLEAGA+I++T+SYQATI GF S+G S E++E+LL KSV +A+EAR+ F + + LVAA++GSYGAYLADGSEYSG+YG E LKDFHRRRLQVL E+GPDL+AFETIPNK NI IPSW+ F+S DG + SG+S + I Sbjct: 17 VDAAGGRLVLDGGLATELEANGADLNDPLWSAKCLLSSPHLIRKVHMDYLEAGANIIITASYQATIQGFESKGFSKEQSENLLTKSVQIALEAREMFLKEHLEKSTPIQHPILVAAALGSYGAYLADGSEYSGDYGEAGTKEFLKDFHRRRLQVLAEAGPDLIAFETIPNKLEAQAYVELLEECNINIPSWLSFNSKDGVHVVSGDSLIECATI 230
BLAST of FC875561 vs. ExPASy Swiss-Prot
Match: HMT2_MAIZE (Homocysteine S-methyltransferase 2 OS=Zea mays GN=HMT-2 PE=2 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 7.295e-61 Identity = 121/227 (53.30%), Postives = 157/227 (69.16%), Query Frame = 3 Query: 51 TTASSLDDLIEK----AGGCAVIDGGFATQLETHGASINDPLWSALYLIKQPHLVKRVHLEYLEAGADILVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKXXXXXXXXXXXXXNIQIPSWICFSSVDGENAPSGESFKDALDI 719 T A S ++ + + AGG V+DGG AT+LE +GA +NDPLWSA L+ PHL+++VH++YLEAGA+I++T+SYQATI GF S+G S E++E+LL KSV +A+EAR+ F + + LVAAS+GSYGAYLADGSEYSG+YG E LKDFHRRRLQVL E+GPDL+AFETIPNK NI IP+W F+S DG + SG+S + I Sbjct: 4 TAAGSAEEAVRRWVDAAGGRLVLDGGLATELEANGADLNDPLWSAKCLLSSPHLIRKVHMDYLEAGANIIITASYQATIQGFESKGFSKEQSENLLTKSVEIALEAREMFLKEHLEKSTPIQHPVLVAASLGSYGAYLADGSEYSGDYGEAGTKEFLKDFHRRRLQVLAEAGPDLIAFETIPNKLEAEAYVELLEECNINIPAWFSFNSKDGVHIVSGDSLIECTTI 230
BLAST of FC875561 vs. ExPASy Swiss-Prot
Match: HMT4_MAIZE (Homocysteine S-methyltransferase 4 OS=Zea mays GN=HMT-4 PE=2 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 1.244e-60 Identity = 117/217 (53.92%), Postives = 149/217 (68.66%), Query Frame = 3 Query: 57 ASSLDDLIEKAGGCAVIDGGFATQLETHGASINDPLWSALYLIKQPHLVKRVHLEYLEAGADILVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKXXXXXXXXXXXXXNIQIPSWICFSSVDGENAPSGESFKD 707 A +L + +AGGCAV+DGG T+LE HGA ++D LWSA L PHL+++VHL+YLEAGAD+++++SYQATI GF SRG S +E+E LL +SV +A EAR F + ALVAAS+GSYGAY ADGSEYSG+YG + E LK+FHRRRLQVL +GPDL+AFETIPNK I+IP+W F+S DG NA SG+ + Sbjct: 11 AGALRGFVREAGGCAVVDGGLGTELEAHGADLHDALWSAKCLASAPHLIRKVHLDYLEAGADVIISASYQATIEGFQSRGFSRDESEELLRRSVHVAQEARRVFAAEGDRSSRRGRPPALVAASVGSYGAYRADGSEYSGDYGKSMTKEDLKNFHRRRLQVLAGAGPDLIAFETIPNKLEAQVYAELLEENGIRIPAWFSFTSKDGVNAASGDPINE 227
BLAST of FC875561 vs. ExPASy Swiss-Prot
Match: SMTA_ASTBI (Selenocysteine methyltransferase OS=Astragalus bisulcatus GN=SMTA PE=1 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 3.388e-58 Identity = 111/222 (50.00%), Postives = 149/222 (67.12%), Query Frame = 3 Query: 66 LDDLIEKAGGCAVIDGGFATQLETHGASINDPLWSALYLIKQPHLVKRVHLEYLEAGADILVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRA--------LVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKXXXXXXXXXXXXXNIQIPSWICFSSVDGENAPSGESFKD 707 + D + +AG AVI GG T+L+ HGA +NDPLWSA L+ PHL+++VHL+YLE GADI++T+SYQATI GF ++G S EE E+LL +SV +A EARD ++ + N + + L+A S+GSYGAYLADGSE+SGNYG + E LKDFHRR++Q+L +SG DLLAFE +PNK NI P+W F+S DG N SG+S ++ Sbjct: 6 ITDFLHQAGRAAVIAGGLGTELQRHGADLNDPLWSAKCLLSCPHLIRQVHLDYLENGADIIITASYQATIQGFKAKGFSDEEGEALLRRSVEIAREARDLYYQRCAESSSDNGDDSRILKQRPILIAGSVGSYGAYLADGSEFSGNYGDAIKSETLKDFHRRKVQILADSGVDLLAFEAVPNKLEAQAYADLLEEENIITPAWFAFTSKDGNNVVSGDSIEE 227
BLAST of FC875561 vs. ExPASy Swiss-Prot
Match: HMT_BACSU (Homocysteine S-methyltransferase ybgG OS=Bacillus subtilis GN=ybgG PE=4 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 9.905e-42 Identity = 92/202 (45.54%), Postives = 127/202 (62.87%), Query Frame = 3 Query: 102 VIDGGFATQLETHGASINDPLWSALYLIKQPHLVKRVHLEYLEAGADILVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKXXXXXXXXXXXXXNIQIPSWICFSSVDGENAPSGESFKD 707 V+DG AT+LE G ++ND LWSA L+++P L+K+VH +Y AGAD +T+SYQ+T GF +RGLS EA L+E SV++A EARD+FW + N + ++AASIG YGAYLADGSEY GNY + ++L +FHR R++ L+E+G D+LA ETIP + +WI FS+ DG + G D Sbjct: 15 VLDGAMATELERKGCNLNDSLWSAKILMEEPELIKQVHTDYFAAGADCAITASYQSTFEGFAARGLSEAEARRLIELSVSIAAEARDEFWSLEEN--RLNRPKPIIAASIGPYGAYLADGSEYRGNY--AISEDELIEFHRPRMKALIEAGADVLACETIPCLTEAKAIVRLLKEFP-ETYAWISFSAKDGLHISDGTPAAD 211
BLAST of FC875561 vs. ExPASy Swiss-Prot
Match: MMUM_ECOLI (Homocysteine S-methyltransferase OS=Escherichia coli (strain K12) GN=mmuM PE=1 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 4.456e-34 Identity = 81/204 (39.71%), Postives = 117/204 (57.35%), Query Frame = 3 Query: 102 VIDGGFATQLETHGASINDPLWSALYLIKQPHLVKRVHLEYLEAGADILVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKXXXXXXXXXXXXXNIQIPSWICFSSVDGENAPSGESFKDAL 713 ++DG AT+LE G ++ D LWSA L++ P L++ VHL+Y AGA +T+SYQAT GF +RGL ++++L+ KSV LA +AR+ + LVA S+G YGAYLADGSEY G+Y V E + FHR R++ L+++G DLLA ET+PN + +W F+ D E+ G +D + Sbjct: 18 LLDGAMATELEARGCNLADSLWSAKVLVENPELIREVHLDYYRAGAQCAITASYQATPAGFAARGLDEAQSKALIGKSVELARKAREAY-----LAENPQAGTLLVAGSVGPYGAYLADGSEYRGDYHCSV--EAFQAFHRPRVEALLDAGADLLACETLPN-FSEIEALAELLTAYPRARAWFSFTLRDSEHLSDGTPLRDVV 213 The following BLAST results are available for this feature:
BLAST of FC875561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875561 ID=FC875561; Name=FC875561; organism=Citrus clementina; type=EST; length=732bpback to top |