FC875702
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875702 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 5.648e-50 Identity = 92/167 (55.09%), Postives = 111/167 (66.47%), Query Frame = 2 Query: 173 GELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGRETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCRG--KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPP 661 G+L IISR F+D+L +RND CPARGFYTYDAFI AAK+FP FG +G+ R +EIAAFF QT ETTGGW AP G Y+WGYCF E +P S YC + +PC YYGRGP+QL+WNYNY +C + DPV++FK+AIWFWMT Q P Sbjct: 69 GDLSGIISRSQFDDMLKHRNDNACPARGFYTYDAFINAAKSFPGFGTTGDTATRKKEIAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPSSNYCSPSAEWPCASGKSYYGRGPMQLSWNYNYGQC--GRAIGSDLLNNPDLVSNDPVIAFKAAIWFWMTPQSP 233 HSP 2 Score: 24.6386 bits (52), Expect = 5.648e-50 Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = 1 Query: 661 KPSCHEVITDEW 696 KPSCH VI +W Sbjct: 234 KPSCHAVIVGQW 245
BLAST of FC875702 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 7.388e-50 Identity = 93/163 (57.06%), Postives = 112/163 (68.71%), Query Frame = 2 Query: 185 KIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGRETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR-GK-YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPP 661 KIISR MF+ +L +RN+ CPA+GFYTYDAF+ AAK+FP+FG +G+ +R RE+AAF QT ETTGGW AP G YAWGYCF+ E +P S YC + YPC GK YYGRGP+QL+WNYNY C ATD VLSFK+A+WFWMT Q P Sbjct: 4 KIISRSMFDQMLKHRNNPACPAKGFYTYDAFLAAAKSFPSFGTTGSTDVRKRELAAFLGQTSHETTGGWPSAPDGPYAWGYCFLKERNPSSNYCAPSPRYPCAPGKSYYGRGPLQLSWNYNYGPC--GEALRVNLLGNPDLVATDRVLSFKTALWFWMTPQAP 164 HSP 2 Score: 27.335 bits (59), Expect = 7.388e-50 Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = 1 Query: 655 ATKPSCHEVITDEW 696 A KPSCH+V+T W Sbjct: 163 APKPSCHDVLTGRW 176
BLAST of FC875702 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3) HSP 1 Score: 193.741 bits (491), Expect = 9.591e-50 Identity = 91/167 (54.49%), Postives = 111/167 (66.47%), Query Frame = 2 Query: 173 GELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGRETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCRG--KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPP 661 G+L IIS F+D+L +RND CPARGFYTY+AFI AAK+FP FG +G+ R +E+AAFF QT ETTGGW AP G Y+WGYCF E +P S YC + +PC +YYGRGP+QL+WNYNY C A D V++FK+AIWFWMTAQPP Sbjct: 84 GDLSGIISSSQFDDMLKHRNDAACPARGFYTYNAFITAAKSFPGFGTTGDTATRKKEVAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPASDYCEPSATWPCASGKRYYGRGPMQLSWNYNYGLC--GRAIGVDLLNNPDLVANDAVIAFKAAIWFWMTAQPP 248 HSP 2 Score: 24.6386 bits (52), Expect = 9.591e-50 Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = 1 Query: 661 KPSCHEVITDEW 696 KPSCH VI +W Sbjct: 249 KPSCHAVIAGQW 260
BLAST of FC875702 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 9.594e-50 Identity = 98/185 (52.97%), Postives = 119/185 (64.32%), Query Frame = 2 Query: 119 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGRETTGGWRDAPGGEYAWGYCFISEISPPSPYCNL--NYPCR--GKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPP 661 CG G C + G +L +ISR F+ +L +RND CPA+GFYTYDAFI AAKA+P+FGN+G+ R REIAAF QT ETTGGW AP G YAWGYCF+ E + PS YC+ +PC +YYGRGPIQ++WNYNY +C ATD V+SFKSA+WFWMTAQ P Sbjct: 58 CGPG--CQSQCGGPSPAPTDLSALISRSTFDQMLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERN-PSTYCSATPQFPCAPGQQYYGRGPIQISWNYNYGQC--GRAIGVDLLNKPDLVATDSVISFKSALWFWMTAQSP 237 HSP 2 Score: 23.483 bits (49), Expect = 9.594e-50 Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = 1 Query: 661 KPSCHEVITDEW 696 KPS H+VIT W Sbjct: 238 KPSSHDVITSRW 249
BLAST of FC875702 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 9.598e-50 Identity = 94/186 (50.54%), Postives = 117/186 (62.90%), Query Frame = 2 Query: 119 CGSGV-VCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGRETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCRG--KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPP 661 CG+ CG + G++G++I+R MF D+L +RN+ CP +GFYTYDAFI AAKAFP FG +G+ T R REIAAF AQT ETTGGW AP G YAWGYC++ E P YC + +PC KYYGRGPIQ+++NYNY + ATD V+SFK+A WFWMT Q P Sbjct: 44 CGNTADYCGSGCQSQCSSTGDIGQLITRSMFNDMLKHRNEGSCPGKGFYTYDAFIAAAKAFPGFGTTGDTTTRKREIAAFLAQTSHETTGGWASAPDGPYAWGYCYLREQGSPGAYCVPSAQWPCAAGRKYYGRGPIQISYNYNYGQA--GKAIGVDLVNNPDLVATDAVISFKTAFWFWMTPQSP 227 HSP 2 Score: 25.409 bits (54), Expect = 9.598e-50 Identity = 9/12 (75.00%), Postives = 9/12 (75.00%), Query Frame = 1 Query: 661 KPSCHEVITDEW 696 KPSCH VIT W Sbjct: 228 KPSCHNVITGGW 239
BLAST of FC875702 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2) HSP 1 Score: 192.2 bits (487), Expect = 1.250e-49 Identity = 100/178 (56.18%), Postives = 114/178 (64.04%), Query Frame = 2 Query: 140 GERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGRETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPC-RGKYY-GRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPP 661 G D G D G L II + F+ LL +RND RCPA GFYTY+AFI AAK FP FGN+G++ MR REIAAF QT ETTGGW DAP G YAWGYC++ EI+ PYC + NY C GK Y GRGPIQL+WNYNY C TDPV+SFK+AIWFWM Q P Sbjct: 76 GGDDGGGDGDDGYLSDIIPKSKFDALLKFRNDARCPAAGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETTGGWPDAPCGPYAWGYCYLKEIN-CQPYCDPSSNYQCVAGKQYCGRGPIQLSWNYNYGLC--GDDLKLPLLQEPELVETDPVISFKTAIWFWMKPQSP 250 HSP 2 Score: 25.7942 bits (55), Expect = 1.250e-49 Identity = 9/12 (75.00%), Postives = 9/12 (75.00%), Query Frame = 1 Query: 661 KPSCHEVITDEW 696 KPSCH VIT W Sbjct: 251 KPSCHAVITGNW 262
BLAST of FC875702 vs. ExPASy Swiss-Prot
Match: CHI5_PHAVU (Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 2.769e-49 Identity = 99/190 (52.11%), Postives = 120/190 (63.16%), Query Frame = 2 Query: 119 CGS-----GVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGRETTGGWRDAPGGEYAWGYCFISEISPPSPYCNL--NYPCR--GKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPP 661 CGS G C + G +L +ISR F+ +L +RND CPA+GFYTYDAFI AAKA+P+FGN+G+ R REIAAF QT ETTGGW AP G YAWGYCF+ E + PS YC+ +PC +YYGRGPIQ++WNYNY +C ATD V+SFKSA+WFWMTAQ P Sbjct: 50 CGSTTDYCGKDCQSQCGGPSPAPTDLSALISRSTFDQVLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERN-PSAYCSATPQFPCAPGQQYYGRGPIQISWNYNYGQC--GRAIGVDLLNKPDLVATDSVISFKSALWFWMTAQSP 236 HSP 2 Score: 23.483 bits (49), Expect = 2.769e-49 Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = 1 Query: 661 KPSCHEVITDEW 696 KPS H+VIT W Sbjct: 237 KPSSHDVITSRW 248
BLAST of FC875702 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 1.042e-48 Identity = 98/187 (52.41%), Postives = 118/187 (63.10%), Query Frame = 2 Query: 119 CGSGVVCGERDTGHGTD--GGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGRETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLN--YPCR--GKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPP 661 CG G C + G T GG+LG IIS MF+ +L +RND C +GFY+Y+AFI AA++FP FG SG+ T R REIAAFFAQT ETTGGW AP G YAWGYC++ E P YC + +PC KY+GRGPIQ++ NYNY C ATDPV+SFKSA+WFWMT Q P Sbjct: 54 CGPGN-CQSQCPGGPTPPGGGDLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPC--GRAIGVDLLNNPDLVATDPVISFKSALWFWMTPQSP 237 HSP 2 Score: 24.6386 bits (52), Expect = 1.042e-48 Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = 1 Query: 661 KPSCHEVITDEW 696 KPSCH+VI W Sbjct: 238 KPSCHDVIIGRW 249
BLAST of FC875702 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2) HSP 1 Score: 189.504 bits (480), Expect = 1.769e-48 Identity = 92/168 (54.76%), Postives = 111/168 (66.07%), Query Frame = 2 Query: 170 GGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGRETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLN--YPCR--GKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPP 661 GG+LG IIS MF+ +L +RND C +GFY+Y+AFI AA++FP FG SG+ T R REIAAFFAQT ETTGGW AP G YAWGYC++ E P YC + +PC KY+GRGPIQ++ NYNY C ATDPV+SFKSA+WFWMT Q P Sbjct: 77 GGDLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPC--GRAIGVDLLNNPDLVATDPVISFKSALWFWMTPQSP 242 HSP 2 Score: 24.6386 bits (52), Expect = 1.769e-48 Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = 1 Query: 661 KPSCHEVITDEW 696 KPSCH+VI W Sbjct: 243 KPSCHDVIIGRW 254
BLAST of FC875702 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 5.108e-48 Identity = 98/181 (54.14%), Postives = 119/181 (65.75%), Query Frame = 2 Query: 137 CGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGRETTG--GWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR-GK-YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPP 661 C + +G G D G L +I+RE F+ +L +RND CPARGFYTYDAFI AAK+FPAF +G++ R RE+AAF AQT ETTG GW AP G Y WGYC+ E++ P+ YC + NYPC GK Y+GRGP+QLTWNYNY +C ATDP +SFKSA WFWMT Q P Sbjct: 58 CQSQCSGSGGDTGGLDSLITRERFDQMLLHRNDGGCPARGFYTYDAFIAAAKSFPAFATTGDDATRKREVAAFLAQTSHETTGGAGWA-APDGPYTWGYCYNRELN-PADYCQWDPNYPCAPGKQYFGRGPMQLTWNYNYGQC--GRAIGVDLLNNPDLLATDPTISFKSAFWFWMTPQSP 234 HSP 2 Score: 24.2534 bits (51), Expect = 5.108e-48 Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = 1 Query: 661 KPSCHEVITDEW 696 KPSCH+VI W Sbjct: 235 KPSCHDVIIGAW 246 The following BLAST results are available for this feature:
BLAST of FC875702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875702 ID=FC875702; Name=FC875702; organism=Citrus clementina; type=EST; length=696bpback to top |