FC876169
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876169 vs. ExPASy Swiss-Prot
Match: LUC7L_MOUSE (Putative RNA-binding protein Luc7-like 1 OS=Mus musculus GN=Luc7l PE=2 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 3.364e-21 Identity = 57/168 (33.93%), Postives = 92/168 (54.76%), Query Frame = 2 Query: 104 MRKQLDVLMGANRNGDVREVNRKYYDRDVCRLYLAGLCPHELFQLTKMDMGPCPKVHSLQLRKEYEEAKAKGVDNYDRELEDAIDRLIVECDRKIGRALKRLEDDDAKAAIAISVSEVTQTPEVLELSKQIKEKLKEADQYDYEGKTDLKIRALEVVEELRTKRADKQ 607 MR LD LMG R+GD K+ D VC+ +L CPH++ T+MD+G C K+H L LR +YE A + ++ + D ++ I ECDR+ A KRL + + + +S + +V EL+++I + L +A+Q EG D + L VE++R K+ + + Sbjct: 7 MRALLDQLMGTARDGDETRQRVKFTDDRVCKSHLLDCCPHDILAGTRMDLGECTKIHDLALRADYEIASKERDLFFELDAMDHLESFIAECDRRTELAKKRLAETQEEISAEVS----AKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKILMEVEKVRAKKKEAE 170
BLAST of FC876169 vs. ExPASy Swiss-Prot
Match: LUC7L_HUMAN (Putative RNA-binding protein Luc7-like 1 OS=Homo sapiens GN=LUC7L PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.364e-21 Identity = 57/168 (33.93%), Postives = 92/168 (54.76%), Query Frame = 2 Query: 104 MRKQLDVLMGANRNGDVREVNRKYYDRDVCRLYLAGLCPHELFQLTKMDMGPCPKVHSLQLRKEYEEAKAKGVDNYDRELEDAIDRLIVECDRKIGRALKRLEDDDAKAAIAISVSEVTQTPEVLELSKQIKEKLKEADQYDYEGKTDLKIRALEVVEELRTKRADKQ 607 MR LD LMG R+GD K+ D VC+ +L CPH++ T+MD+G C K+H L LR +YE A + ++ + D ++ I ECDR+ A KRL + + + +S + +V EL+++I + L +A+Q EG D + L VE++R K+ + + Sbjct: 7 MRALLDQLMGTARDGDETRQRVKFTDDRVCKSHLLDCCPHDILAGTRMDLGECTKIHDLALRADYEIASKERDLFFELDAMDHLESFIAECDRRTELAKKRLAETQEEISAEVS----AKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKILMEVEKVRAKKKEAE 170
BLAST of FC876169 vs. ExPASy Swiss-Prot
Match: LC7L2_HUMAN (Putative RNA-binding protein Luc7-like 2 OS=Homo sapiens GN=LUC7L2 PE=1 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 9.787e-21 Identity = 56/170 (32.94%), Postives = 90/170 (52.94%), Query Frame = 2 Query: 104 MRKQLDVLMGANRNGDVREVNRKYYDRDVCRLYLAGLCPHELFQLTKMDMGPCPKVHSLQLRKEYEEAKAKGVDNYDRELEDAIDRLIVECDRKIGRALKRLEDDDAKAAIAISVSEVTQTPEVLELSKQIKEKLKEADQYDYEGKTDLKIRALEVVEELRTKRADKQSM 613 MR LD LMG +R+GD K+ D VC+ +L CPH++ T+MD+G C KVH L LR +YE A + ++ + D + I +CDR+ A KRL A+ IS + V EL+++I + L + +Q EG + + ++ VE+ R K+ + + + Sbjct: 7 MRAMLDQLMGTSRDGDTTRQRIKFSDDRVCKSHLLNCCPHDVLSGTRMDLGECLKVHDLALRADYEIASKEQDFFFELDAMDHLQSFIADCDRRTEVAKKRL----AETQEEISAEVAAKAERVHELNEEIGKLLAKVEQLGAEGNVEESQKVMDEVEKARAKKREAEEV 172
BLAST of FC876169 vs. ExPASy Swiss-Prot
Match: LC7L2_MOUSE (Putative RNA-binding protein Luc7-like 2 OS=Mus musculus GN=Luc7l2 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.180e-20 Identity = 55/170 (32.35%), Postives = 90/170 (52.94%), Query Frame = 2 Query: 104 MRKQLDVLMGANRNGDVREVNRKYYDRDVCRLYLAGLCPHELFQLTKMDMGPCPKVHSLQLRKEYEEAKAKGVDNYDRELEDAIDRLIVECDRKIGRALKRLEDDDAKAAIAISVSEVTQTPEVLELSKQIKEKLKEADQYDYEGKTDLKIRALEVVEELRTKRADKQSM 613 MR LD LMG +R+GD K+ D VC+ +L CPH++ T+MD+G C KVH L LR +YE A + ++ + D + I +CDR+ + KRL A+ IS + V EL+++I + L + +Q EG + + ++ VE+ R K+ + + + Sbjct: 7 MRAMLDQLMGTSRDGDTTRQRIKFSDDRVCKSHLLNCCPHDVLSGTRMDLGECLKVHDLALRADYEIASKEQDFFFELDAMDHLQSFIADCDRRTEVSKKRL----AETQEEISAEVAAKAERVHELNEEIGKLLAKVEQLGAEGNVEESQKVMDEVEKARAKKREAEEV 172
BLAST of FC876169 vs. ExPASy Swiss-Prot
Match: LUC7L_DICDI (Luc7-like protein OS=Dictyostelium discoideum GN=crop PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.665e-18 Identity = 60/198 (30.30%), Postives = 100/198 (50.51%), Query Frame = 2 Query: 95 MDAMRKQLDVLMGANRN---GDVREVNRKYYDRDVCRLYLAGLCPHELFQLTKM-DMGPCPKVHSLQLRKEYEEAKAKGVDNYDRELEDAIDRLIVECDRKIGRALKRL---------------------EDDDAKAAIAISVSEVTQTPEVLELSKQIKEKLKEADQYDYEGKTDLKIRALEVVEELRTKRADKQSM 613 MDA+R QLD +G +RN D +V + D D+C+ +L GLCPHELF + D+GPC K+H K+Y+ K K +Y+RE I+ LI + D+KI R +RL + DD + + + + Q ++ EL +I+E LK+A++ EG+ + +EL+ ++ + + + Sbjct: 1 MDAIRAQLDEFLGKDRNLLPKDRIKVENDFNDPDICKFFLCGLCPHELFTNANIRDLGPCSKLHDENCVKQYQNNKDKDKYDYEREWVRVIEGLISDNDKKIKRNKERLLQNPNGDANHHGGPIQQQSISQLDDEEGGL---LPDKEQNSKITELDLKIQELLKKAEELGEEGQITEAQALMTEADELKNQKVELEKI 195
BLAST of FC876169 vs. ExPASy Swiss-Prot
Match: LC7L3_PONAB (Luc7-like protein 3 OS=Pongo abelii GN=LUC7L3 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.120e-16 Identity = 50/162 (30.86%), Postives = 85/162 (52.47%), Query Frame = 2 Query: 116 LDVLMGANRN--GDVREVNRKYYDRDVCRLYLAGLCPHELFQLTKMDMGPCPKVHSLQLRKEYEEAKAKGVDNYDRELEDAIDRLIVECDRKIGRALKRLEDDDAKAAIAISVSEVTQTPEVLELSKQIKEKLKEADQYDYEGKTDLKIRALEVVEELRTKR 595 LD LMG +RN D + N ++ VC+ YL G CP ELF T+ D+GPC K+H LRK+YE++ Y+R+ + L+ E +R+I R RL + + + ++ L+ +I L++ ++ EGK + +++VE+L+ +R Sbjct: 8 LDELMGRDRNLAPDEKRSNVRWDHESVCKYYLCGFCPAELFTNTRSDLGPCEKIHDENLRKQYEKSSRFMKVGYERDFLRYLQSLLAEVERRIRRGHARLALSQNQQSSGAAGPTGKNEEKIQVLTDKIDVLLQQIEELGSEGKVEEAQGMMKLVEQLKEER 169
BLAST of FC876169 vs. ExPASy Swiss-Prot
Match: LC7L3_MOUSE (Luc7-like protein 3 OS=Mus musculus GN=Luc7l3 PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.120e-16 Identity = 50/162 (30.86%), Postives = 85/162 (52.47%), Query Frame = 2 Query: 116 LDVLMGANRN--GDVREVNRKYYDRDVCRLYLAGLCPHELFQLTKMDMGPCPKVHSLQLRKEYEEAKAKGVDNYDRELEDAIDRLIVECDRKIGRALKRLEDDDAKAAIAISVSEVTQTPEVLELSKQIKEKLKEADQYDYEGKTDLKIRALEVVEELRTKR 595 LD LMG +RN D + N ++ VC+ YL G CP ELF T+ D+GPC K+H LRK+YE++ Y+R+ + L+ E +R+I R RL + + + ++ L+ +I L++ ++ EGK + +++VE+L+ +R Sbjct: 8 LDELMGRDRNLAPDEKRSNVRWDHESVCKYYLCGFCPAELFTNTRSDLGPCEKIHDENLRKQYEKSSRFMKVGYERDFLRYLQSLLAEVERRIRRGHARLALSQNQQSSGAAGPTGKNEEKIQVLTDKIDVLLQQIEELGSEGKVEEAQGMMKLVEQLKEER 169
BLAST of FC876169 vs. ExPASy Swiss-Prot
Match: LC7L3_HUMAN (Luc7-like protein 3 OS=Homo sapiens GN=LUC7L3 PE=1 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 1.120e-16 Identity = 50/162 (30.86%), Postives = 85/162 (52.47%), Query Frame = 2 Query: 116 LDVLMGANRN--GDVREVNRKYYDRDVCRLYLAGLCPHELFQLTKMDMGPCPKVHSLQLRKEYEEAKAKGVDNYDRELEDAIDRLIVECDRKIGRALKRLEDDDAKAAIAISVSEVTQTPEVLELSKQIKEKLKEADQYDYEGKTDLKIRALEVVEELRTKR 595 LD LMG +RN D + N ++ VC+ YL G CP ELF T+ D+GPC K+H LRK+YE++ Y+R+ + L+ E +R+I R RL + + + ++ L+ +I L++ ++ EGK + +++VE+L+ +R Sbjct: 8 LDELMGRDRNLAPDEKRSNVRWDHESVCKYYLCGFCPAELFTNTRSDLGPCEKIHDENLRKQYEKSSRFMKVGYERDFLRYLQSLLAEVERRIRRGHARLALSQNQQSSGAAGPTGKNEEKIQVLTDKIDVLLQQIEELGSEGKVEEAQGMMKLVEQLKEER 169
BLAST of FC876169 vs. ExPASy Swiss-Prot
Match: LC7L3_BOVIN (Luc7-like protein 3 OS=Bos taurus GN=LUC7L3 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.120e-16 Identity = 50/162 (30.86%), Postives = 85/162 (52.47%), Query Frame = 2 Query: 116 LDVLMGANRN--GDVREVNRKYYDRDVCRLYLAGLCPHELFQLTKMDMGPCPKVHSLQLRKEYEEAKAKGVDNYDRELEDAIDRLIVECDRKIGRALKRLEDDDAKAAIAISVSEVTQTPEVLELSKQIKEKLKEADQYDYEGKTDLKIRALEVVEELRTKR 595 LD LMG +RN D + N ++ VC+ YL G CP ELF T+ D+GPC K+H LRK+YE++ Y+R+ + L+ E +R+I R RL + + + ++ L+ +I L++ ++ EGK + +++VE+L+ +R Sbjct: 8 LDELMGRDRNLAPDEKRSNVRWDHESVCKYYLCGFCPAELFTNTRSDLGPCEKIHDENLRKQYEKSSRFMKVGYERDFLRYLQSLLAEVERRIRRGHARLALSQNQQSSGAAGPTGKNEEKIQVLTDKIDVLLQQIEELGSEGKVEEAQGMMKLVEQLKEER 169
BLAST of FC876169 vs. ExPASy Swiss-Prot
Match: LUC7_SCHPO (U1 snRNP-associated protein usp106 OS=Schizosaccharomyces pombe GN=usp106 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.238e-15 Identity = 39/102 (38.24%), Postives = 63/102 (61.76%), Query Frame = 2 Query: 107 RKQLDVLMGANRNGDVREVNRKYYDRDVCRLYLAGLCPHELFQLTKMDMGPCPKVHSLQLRKEYEEAKAKGVDNYDRELEDAIDRLIVECDRKIGRALKRLE 412 RK ++ LMG+N + + DR VCR +L G+CPH++F TKMD+GPCPK+HS +L+ +YE A Y+ + + ++R + +C+++I A R E Sbjct: 6 RKIIEQLMGSNLSNFTSRGLVHFTDRKVCRSFLCGICPHDIFTNTKMDLGPCPKIHSDKLKSDYERASYSHDYGYEWDYLEDLERHVDDCNKRIDIAEARRE 107 The following BLAST results are available for this feature:
BLAST of FC876169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876169 ID=FC876169; Name=FC876169; organism=Citrus clementina; type=EST; length=736bpback to top |