FC876199
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876199 vs. ExPASy Swiss-Prot
Match: SCAM3_ARATH (Secretory carrier-associated membrane protein 3 OS=Arabidopsis thaliana GN=SCAMP3 PE=1 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 6.826e-47 Identity = 96/173 (55.49%), Postives = 112/173 (64.74%), Query Frame = 1 Query: 160 MAGRYDSNPF-DEEEVNPFSDPAVRXXXXXXXXXXXXXXXTTNSASVPPATNSRLSPLPHEPAGFNFERDAPIDIPXXXXXXXXXXXXXXXXXXXXXRRREQDVRRKEEAAARAGIVLEEKNWPPFSPIIHHDIANEIPIHLQRLQYVAFATYLGLFVCLLWNIVAVTTAWIK 675 MA RYD NPF +EEEVNPF+ N+ VPPA+NSRLSPLP EP GF++ R I + +RREQD++RKE+AAARAGIV+E KNWPPF P+IHHDIANEIP+HLQRLQYV FATYLGL +CL WNI+AVTTAWIK Sbjct: 1 MANRYDPNPFAEEEEVNPFA----------------------NARGVPPASNSRLSPLPPEPVGFDYGRTVDIPLDRAGTQDLKKKEKELQAKEAELKRREQDLKRKEDAAARAGIVIEVKNWPPFFPLIHHDIANEIPVHLQRLQYVTFATYLGLVLCLFWNIIAVTTAWIK 151
BLAST of FC876199 vs. ExPASy Swiss-Prot
Match: SCAM2_ORYSJ (Secretory carrier-associated membrane protein 2 OS=Oryza sativa subsp. japonica GN=SCAMP2 PE=2 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 3.746e-45 Identity = 91/172 (52.91%), Postives = 110/172 (63.95%), Query Frame = 1 Query: 160 MAGRYDSNPFDEEEVNPFSDPAVRXXXXXXXXXXXXXXXTTNSASVPPATNSRLSPLPHEPAGFNFERDAPIDIPXXXXXXXXXXXXXXXXXXXXXRRREQDVRRKEEAAARAGIVLEEKNWPPFSPIIHHDIANEIPIHLQRLQYVAFATYLGLFVCLLWNIVAVTTAWIK 675 MAGRYD NPFDE++VNPF+ SVPPA+NSR+ PLPHEP GF +R A +DIP +RE ++RR+EEAA+RAGIV+EEKNWPPF PIIHHDI+NEIPIHLQR+QY+AF++ LGL CL WNI+A T AWIK Sbjct: 1 MAGRYDRNPFDEDDVNPFA-----------------------GGSVPPASNSRMPPLPHEP-GFYNDRGATVDIPLDSTKDMKKKEKELQAKEAELNKRESELRRREEAASRAGIVIEEKNWPPFFPIIHHDISNEIPIHLQRMQYLAFSSLLGLAACLFWNIIATTAAWIK 148
BLAST of FC876199 vs. ExPASy Swiss-Prot
Match: SCAM1_ORYSJ (Secretory carrier-associated membrane protein 1 OS=Oryza sativa subsp. japonica GN=SCAMP1 PE=2 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 3.171e-44 Identity = 91/173 (52.60%), Postives = 114/173 (65.90%), Query Frame = 1 Query: 160 MAGRYDSNPFDEEEVNPFSDPAVRXXXXXXXXXXXXXXXTTNSASVPP-ATNSRLSPLPHEPAGFNFERDAPIDIPXXXXXXXXXXXXXXXXXXXXXRRREQDVRRKEEAAARAGIVLEEKNWPPFSPIIHHDIANEIPIHLQRLQYVAFATYLGLFVCLLWNIVAVTTAWIK 675 MAGRYDSNPF+E++VNPFS+ A R N +VP ++NSRLSPLP EPA F A +DIP +RE++++R+EEAAARAGIV+EEKNWPPF P+IHHDI NEIP HLQR+QYVAFA++LGL CL WN++AVT+AW+K Sbjct: 1 MAGRYDSNPFEEDDVNPFSEQA-RGKAGGQPSYGGGAFYMPNPRNVPSVSSNSRLSPLPPEPAAFG----ATVDIPLDSSKDLKNREKELQAREAELNKREKELKRREEAAARAGIVIEEKNWPPFLPLIHHDITNEIPSHLQRMQYVAFASFLGLACCLFWNVIAVTSAWVK 168
BLAST of FC876199 vs. ExPASy Swiss-Prot
Match: SCAM1_ORYSI (Putative secretory carrier-associated membrane protein 1 OS=Oryza sativa subsp. indica GN=SCAMP1 PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 3.171e-44 Identity = 91/173 (52.60%), Postives = 114/173 (65.90%), Query Frame = 1 Query: 160 MAGRYDSNPFDEEEVNPFSDPAVRXXXXXXXXXXXXXXXTTNSASVPP-ATNSRLSPLPHEPAGFNFERDAPIDIPXXXXXXXXXXXXXXXXXXXXXRRREQDVRRKEEAAARAGIVLEEKNWPPFSPIIHHDIANEIPIHLQRLQYVAFATYLGLFVCLLWNIVAVTTAWIK 675 MAGRYDSNPF+E++VNPFS+ A R N +VP ++NSRLSPLP EPA F A +DIP +RE++++R+EEAAARAGIV+EEKNWPPF P+IHHDI NEIP HLQR+QYVAFA++LGL CL WN++AVT+AW+K Sbjct: 1 MAGRYDSNPFEEDDVNPFSEQA-RGKAGGQPSYGGGAFYMPNPRNVPSMSSNSRLSPLPPEPAAFG----ATVDIPLDSSKDLKNREKELQAREAELNKREKELKRREEAAARAGIVIEEKNWPPFLPLIHHDITNEIPSHLQRMQYVAFASFLGLACCLFWNVIAVTSAWVK 168
BLAST of FC876199 vs. ExPASy Swiss-Prot
Match: SCAM5_ARATH (Secretory carrier-associated membrane protein 5 OS=Arabidopsis thaliana GN=SCAMP5 PE=2 SV=2) HSP 1 Score: 177.178 bits (448), Expect = 7.064e-44 Identity = 95/175 (54.29%), Postives = 111/175 (63.43%), Query Frame = 1 Query: 160 MAGRYDSNPFDEE-EVNPFSDPAVRXXXXXXXXXXXXXXXTTNSASVPPATNSRLSPLPHEPAGFNFER--DAPIDIPXXXXXXXXXXXXXXXXXXXXXRRREQDVRRKEEAAARAGIVLEEKNWPPFSPIIHHDIANEIPIHLQRLQYVAFATYLGLFVCLLWNIVAVTTAWIK 675 M GRYD N FDE+ EVNPF++P SVP A+NSRLSPLP EPAGF + R D P+D P RRREQD++RK++AAARAGIV+E KNWP F P+IHHDIANEI + LQRLQY+AFATYLGL + L WNI+AVTTAWIK Sbjct: 1 MGGRYDRNTFDEQDEVNPFANPG----------------------SVPAASNSRLSPLPPEPAGFGYGRTVDIPLDRPGSGAQDLKKKEKELQAKEADLRRREQDLKRKQDAAARAGIVIEAKNWPTFFPLIHHDIANEILVRLQRLQYIAFATYLGLVLALFWNIIAVTTAWIK 153
BLAST of FC876199 vs. ExPASy Swiss-Prot
Match: SCAM_PEA (Secretory carrier-associated membrane protein OS=Pisum sativum GN=PSAM2 PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 3.876e-42 Identity = 90/172 (52.33%), Postives = 105/172 (61.05%), Query Frame = 1 Query: 160 MAGRYDSNPFDEEEVNPFSDPAVRXXXXXXXXXXXXXXXTTNSASVPPATNSRLSPLPHEPAGFNFERDAPIDIPXXXXXXXXXXXXXXXXXXXXXRRREQDVRRKEEAAARAGIVLEEKNWPPFSPIIHHDIANEIPIHLQRLQYVAFATYLGLFVCLLWNIVAVTTAWIK 675 MAGRYD NPFDEE+VNPFS+P S ATNSR +PL + A +N+ +DIP R+REQ+VRRKEEA ARAGIV+EEKNWPPF PIIHHDI NEIPIHL+ LQYVAF + LGL +CL WN+V+VT AWIK Sbjct: 1 MAGRYDPNPFDEEQVNPFSNPR----------------------SAASATNSRPAPLNPDRADYNYGFGPTVDIPLDTSTDGKKKERDLQAKEAELRKREQEVRRKEEAIARAGIVIEEKNWPPFFPIIHHDITNEIPIHLRTLQYVAFFSLLGLVLCLTWNVVSVTAAWIK 150
BLAST of FC876199 vs. ExPASy Swiss-Prot
Match: SCAM4_ORYSJ (Secretory carrier-associated membrane protein 4 OS=Oryza sativa subsp. japonica GN=SCAMP4 PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.513e-41 Identity = 94/178 (52.81%), Postives = 112/178 (62.92%), Query Frame = 1 Query: 160 MAGR--YDSNPFDE---EEVNPFSDPAVRXXXXXXXXXXXXXXXTTNSA-SVPPATNSRLSPLPHEPAGFNFERDAPIDIPXXXXXXXXXXXXXXXXXXXXXRRREQDVRRKEEAAARAGIVLEEKNWPPFSPIIHHDIANEIPIHLQRLQYVAFATYLGLFVCLLWNIVAVTTAWIK 675 MAGR YD NPF+E +EVNPF+D A + TT S S PPAT+ LSPLP EPA F + P+DIP RRE++++R+EEAAARAGIVLE+KNWPPF PIIH+DI NEIP+HLQR QYVAFA+ LGL +CL WNI+ VT AWIK Sbjct: 1 MAGRSRYD-NPFEEGGGDEVNPFADKASKGGSAGQSSYSGGAFYTTQSRPSAPPATH--LSPLPPEPADFYNDFSTPVDIPMDTSKDMKTREKELLAKEAELNRREKEIKRREEAAARAGIVLEDKNWPPFFPIIHNDIGNEIPVHLQRTQYVAFASLLGLVLCLFWNIICVTAAWIK 175
BLAST of FC876199 vs. ExPASy Swiss-Prot
Match: SCAM1_ARATH (Secretory carrier-associated membrane protein 1 OS=Arabidopsis thaliana GN=SCAMP1 PE=1 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.629e-40 Identity = 88/169 (52.07%), Postives = 108/169 (63.91%), Query Frame = 1 Query: 169 RYDSNPFDEEEVNPFSDPAVRXXXXXXXXXXXXXXXTTNSASVPPATNSRLSPLPHEPAGFNFERDAPIDIPXXXXXXXXXXXXXXXXXXXXXRRREQDVRRKEEAAARAGIVLEEKNWPPFSPIIHHDIANEIPIHLQRLQYVAFATYLGLFVCLLWNIVAVTTAWIK 675 RY S+ FD+ E+NPF++P SVP AT S+LSPLP EP ++R A +DIP +RREQ+++RKE+A A+AGIV+EEKNWPPF P+IHHDI+NEIPIHLQR+QYVAF + LGL VCLLWNIVAVTTAWIK Sbjct: 3 RYQSHSFDDGEINPFANPT----------------------SVPAAT-SKLSPLPPEP----YDRGATMDIPLDSGKDLKAKEKELREKEAELKRREQEIKRKEDAIAQAGIVIEEKNWPPFFPLIHHDISNEIPIHLQRIQYVAFTSMLGLVVCLLWNIVAVTTAWIK 144
BLAST of FC876199 vs. ExPASy Swiss-Prot
Match: SCAM2_ARATH (Secretory carrier-associated membrane protein 2 OS=Arabidopsis thaliana GN=SCAMP2 PE=2 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.801e-39 Identity = 83/169 (49.11%), Postives = 103/169 (60.95%), Query Frame = 1 Query: 169 RYDSNPFDEEEVNPFSDPAVRXXXXXXXXXXXXXXXTTNSASVPPATNSRLSPLPHEPAGFNFERDAPIDIPXXXXXXXXXXXXXXXXXXXXXRRREQDVRRKEEAAARAGIVLEEKNWPPFSPIIHHDIANEIPIHLQRLQYVAFATYLGLFVCLLWNIVAVTTAWIK 675 R+D NPF +EE+NPF+ N SVPPA+NS L PLP EP ++R A +DIP +R+EQ+++R+E+A AR G+V+EEKNWP F P+IHHDI NEIPIHLQ++QYVAF T LGL CLLWNIVAVT AWIK Sbjct: 3 RHDPNPFADEEINPFA----------------------NHTSVPPASNSYLKPLPPEP----YDRGATVDIPLDSGNDLRAKEMELQAKENELKRKEQELKRREDAIARTGVVIEEKNWPEFFPLIHHDIPNEIPIHLQKIQYVAFTTLLGLVGCLLWNIVAVTVAWIK 145
BLAST of FC876199 vs. ExPASy Swiss-Prot
Match: SCAM3_ORYSJ (Secretory carrier-associated membrane protein 3 OS=Oryza sativa subsp. japonica GN=SCAMP3 PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 8.936e-39 Identity = 80/172 (46.51%), Postives = 106/172 (61.63%), Query Frame = 1 Query: 160 MAGRYDSNPFDEEEVNPFSDPAVRXXXXXXXXXXXXXXXTTNSASVPPATNSRLSPLPHEPAGFNFERDAPIDIPXXXXXXXXXXXXXXXXXXXXXRRREQDVRRKEEAAARAGIVLEEKNWPPFSPIIHHDIANEIPIHLQRLQYVAFATYLGLFVCLLWNIVAVTTAWIK 675 MAG++ N F++++VNPF+ SVPPA NSRL PL HEPA F +DIP +RE++++RKEEAAA+AGIV+E+KNWPPF P+IHH+I+NEIPIHLQR+QY+AF+++LGL CL WNI+A TTAW+K Sbjct: 1 MAGKHGRNGFEDDDVNPFA-----------------------GGSVPPANNSRLPPLSHEPADFY-----NVDIPLDSSKDLKKKEKELQAMEAELNKRERELKRKEEAAAQAGIVIEDKNWPPFFPLIHHNISNEIPIHLQRMQYLAFSSFLGLAACLFWNIIATTTAWVK 144 The following BLAST results are available for this feature:
BLAST of FC876199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876199 ID=FC876199; Name=FC876199; organism=Citrus clementina; type=EST; length=677bpback to top |