FC876238
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDHG_CITLA (Malate dehydrogenase, glyoxysomal OS=Citrullus lanatus PE=1 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 3.188e-61 Identity = 116/139 (83.45%), Postives = 125/139 (89.93%), Query Frame = 1 Query: 73 QPTSGANQRIARIAAHLHPPTLQIEGESSGLGRMDCRAKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAG 489 QP NQRIARI+AHLHPP Q+E ESS L R +CRAKGG+PGFKVA+LGAAGGIGQPLAMLMK+NPLVSVLHLYDVVN PGVTADISHMDT AVVRGFLGQQQLE ALTGMD++I+PAGVPRKPGMTRDDLF INAG Sbjct: 2 QPIPDVNQRIARISAHLHPPKSQME-ESSALRRANCRAKGGAPGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAG 139
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDHG_CUCSA (Malate dehydrogenase, glyoxysomal OS=Cucumis sativus GN=MDHG PE=2 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 4.164e-61 Identity = 117/139 (84.17%), Postives = 125/139 (89.93%), Query Frame = 1 Query: 73 QPTSGANQRIARIAAHLHPPTLQIEGESSGLGRMDCRAKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAG 489 QP NQRIARI+AHLHPP Q+E ESS L R +CRAKGG+PGFKVA+LGAAGGIGQPLAMLMK+NPLVSVLHLYDVVN PGVTADISHMDT AVVRGFLGQQQLE ALTGMD+V+IPAGVPRKPGMTRDDLF INAG Sbjct: 2 QPIPDVNQRIARISAHLHPPKYQME-ESSVLRRANCRAKGGAPGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLERALTGMDLVVIPAGVPRKPGMTRDDLFKINAG 139
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDHG2_ARATH (Probable malate dehydrogenase, glyoxysomal OS=Arabidopsis thaliana GN=At2g22780 PE=1 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 1.750e-59 Identity = 113/134 (84.33%), Postives = 123/134 (91.79%), Query Frame = 1 Query: 91 NQRIARIAAHLHPPTLQIE-GESSGLGRMDCRAKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAG 489 NQRIARI+AHL+PP L + + SGL R+ CRAKGGSPGFKVA+LGAAGGIGQPLAMLMK+NPLVSVLHLYDV N PGVTADISHMDT+AVVRGFLGQ QLE+ALTGMD+VIIPAGVPRKPGMTRDDLFNINAG Sbjct: 4 NQRIARISAHLNPPNLHNQIADGSGLNRVACRAKGGSPGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVANAPGVTADISHMDTSAVVRGFLGQPQLEEALTGMDLVIIPAGVPRKPGMTRDDLFNINAG 137
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDHG1_ARATH (Malate dehydrogenase, glyoxysomal OS=Arabidopsis thaliana GN=At5g09660 PE=1 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 5.268e-56 Identity = 106/134 (79.10%), Postives = 122/134 (91.04%), Query Frame = 1 Query: 88 ANQRIARIAAHLHPPTLQIEGESSGLGRMDCRAKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAG 489 ANQRIARI+AHL P Q+E ++S +GR +CRAKGG+PGFKVA+LGAAGGIGQ L++LMK+NPLVS+LHLYDVVN PGVTAD+SHMDT AVVRGFLG +QLEDALTGMD+VIIPAG+PRKPGMTRDDLF INAG Sbjct: 7 ANQRIARISAHLTP---QMEAKNSVIGRENCRAKGGNPGFKVAILGAAGGIGQSLSLLMKMNPLVSLLHLYDVVNAPGVTADVSHMDTGAVVRGFLGAKQLEDALTGMDLVIIPAGIPRKPGMTRDDLFKINAG 137
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDHG2_BRANA (Malate dehydrogenase 2, glyoxysomal OS=Brassica napus GN=MDH2 PE=3 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 1.533e-55 Identity = 106/135 (78.52%), Postives = 122/135 (90.37%), Query Frame = 1 Query: 88 ANQRIARIAAHLHPP-TLQIEGESSGLGRMDCRAKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAG 489 AN+RIA I+AHL P T Q+E ++S +GR +CRAKGG+PGFKVA+LGAAGGIGQ L++LMK+NPLVS+LHLYDVVN PGVTAD+SHMDT AVVRGFLG +QLEDALTGMD+VIIPAGVPRKPGMTRDDLF INAG Sbjct: 7 ANKRIAMISAHLQPSFTPQMEAKNSVMGRENCRAKGGNPGFKVAILGAAGGIGQSLSLLMKMNPLVSLLHLYDVVNAPGVTADVSHMDTGAVVRGFLGAKQLEDALTGMDLVIIPAGVPRKPGMTRDDLFKINAG 141
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDHG_SOYBN (Malate dehydrogenase, glyoxysomal OS=Glycine max PE=2 SV=2) HSP 1 Score: 214.542 bits (545), Expect = 2.002e-55 Identity = 109/139 (78.42%), Postives = 118/139 (84.89%), Query Frame = 1 Query: 73 QPTSGANQRIARIAAHLHPPTLQIEGESSGLGRMDCRAKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAG 489 + SGA+ RI+RIA HL P + L R DCRAKGG GFKVA+LGAAGGIGQPLAMLMK+NPLVS+LHLYDVVNTPGVT+DISHMDT AVVRGFLGQQQLEDAL GMD+VIIPAGVPRKPGMTRDDLFNINAG Sbjct: 2 EANSGASDRISRIAGHLRPQ----REDDVCLKRSDCRAKGGVSGFKVAILGAAGGIGQPLAMLMKMNPLVSLLHLYDVVNTPGVTSDISHMDTGAVVRGFLGQQQLEDALIGMDLVIIPAGVPRKPGMTRDDLFNINAG 136
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDHG_ORYSJ (Malate dehydrogenase, glyoxysomal OS=Oryza sativa subsp. japonica GN=Os12g0632700 PE=1 SV=3) HSP 1 Score: 212.616 bits (540), Expect = 7.607e-55 Identity = 106/139 (76.26%), Postives = 122/139 (87.77%), Query Frame = 1 Query: 73 QPTSGANQRIARIAAHLHPPTLQIEGESSGLGRMDCRAKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAG 489 + + A +R+ R+A+HL PP Q+E ES L +CRAKG +PGFKVA+LGA+GGIGQPLA+LMK+NPLVSVLHLYDVVNTPGVTADISHM+T AVVRGFLGQ QLE+ALTGMD+VIIPAGVPRKPGMTRDDLFNINAG Sbjct: 2 EDAAAAARRMERLASHLRPPASQME-ESPLLRGSNCRAKGAAPGFKVAILGASGGIGQPLALLMKMNPLVSVLHLYDVVNTPGVTADISHMNTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAG 139
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDHG1_BRANA (Malate dehydrogenase 1, glyoxysomal OS=Brassica napus GN=MDH1 PE=2 SV=2) HSP 1 Score: 208.764 bits (530), Expect = 1.098e-53 Identity = 104/135 (77.04%), Postives = 119/135 (88.15%), Query Frame = 1 Query: 88 ANQRIARIAAHLHPP-TLQIEGESSGLGRMDCRAKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAG 489 A +RIA I+AHL P T Q+E ++S +G CRAKGG+PGFKVA+LGAAGGIGQ L++LMK+NPLVS+LHLYDVVN PGVTAD+SHMDT AVVRGFLG +QLEDALTGMD+VIIPAGVPRKPGMTRDDLF INAG Sbjct: 7 AYKRIAMISAHLQPSFTPQMEAKNSVMGLESCRAKGGNPGFKVAILGAAGGIGQSLSLLMKMNPLVSLLHLYDVVNAPGVTADVSHMDTGAVVRGFLGAKQLEDALTGMDLVIIPAGVPRKPGMTRDDLFKINAG 141
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDHM_FRAAN (Malate dehydrogenase, mitochondrial OS=Fragaria ananassa GN=MMDHI PE=1 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 7.908e-36 Identity = 71/97 (73.20%), Postives = 84/97 (86.60%), Query Frame = 1 Query: 199 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAG 489 P KVAVLGAAGGIGQPLA+LMK+NPLVS L LYD+ TPGV AD+SH++T + V+G+ G++QL +AL G D+VIIPAGVPRKPGMTRDDLFNINAG Sbjct: 25 PQRKVAVLGAAGGIGQPLALLMKLNPLVSQLSLYDIAGTPGVAADVSHINTRSEVKGYAGEEQLGEALEGCDVVIIPAGVPRKPGMTRDDLFNINAG 121
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDHM_EUCGU (Malate dehydrogenase, mitochondrial OS=Eucalyptus gunnii GN=MDH PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 6.695e-35 Identity = 70/97 (72.16%), Postives = 82/97 (84.54%), Query Frame = 1 Query: 199 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAG 489 P KVAVLGAAGGIGQPLA+LMK+NPLVS L LYD+ TPGV AD+ H++T + V G++G++QL AL G D+VIIPAGVPRKPGMTRDDLFNINAG Sbjct: 33 PERKVAVLGAAGGIGQPLALLMKLNPLVSQLALYDIAGTPGVAADVGHINTRSEVAGYVGEEQLGQALEGSDVVIIPAGVPRKPGMTRDDLFNINAG 129 The following BLAST results are available for this feature:
BLAST of FC876238 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 156
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876238 ID=FC876238; Name=FC876238; organism=Citrus clementina; type=EST; length=491bpback to top |