FC876289
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876289 vs. ExPASy Swiss-Prot
Match: SEC13_RAT (Protein SEC13 homolog OS=Rattus norvegicus GN=Sec13 PE=1 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 3.725e-51 Identity = 91/162 (56.17%), Postives = 113/162 (69.75%), Query Frame = 1 Query: 97 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALV 582 ++T HED +HD MDYYG RLAT SSD S+KI V N +A L GH+G VW+VAWAHP +G+ILASCS+D VIIWKE N W K H H SSVNS+ WAPH+ GL LACGSSDG IS+ T +G W+ +I+ AH +G +VSWAP+ PG+L+ Sbjct: 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGT-WEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLI 168 HSP 2 Score: 22.3274 bits (46), Expect = 3.725e-51 Identity = 7/11 (63.64%), Postives = 9/11 (81.82%), Query Frame = 3 Query: 603 VQKLCSGGCDN 635 ++K SGGCDN Sbjct: 179 IKKFASGGCDN 189
BLAST of FC876289 vs. ExPASy Swiss-Prot
Match: SEC13_MOUSE (Protein SEC13 homolog OS=Mus musculus GN=Sec13 PE=2 SV=3) HSP 1 Score: 199.519 bits (506), Expect = 3.725e-51 Identity = 91/162 (56.17%), Postives = 113/162 (69.75%), Query Frame = 1 Query: 97 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALV 582 ++T HED +HD MDYYG RLAT SSD S+KI V N +A L GH+G VW+VAWAHP +G+ILASCS+D VIIWKE N W K H H SSVNS+ WAPH+ GL LACGSSDG IS+ T +G W+ +I+ AH +G +VSWAP+ PG+L+ Sbjct: 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGT-WEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLI 168 HSP 2 Score: 22.3274 bits (46), Expect = 3.725e-51 Identity = 7/11 (63.64%), Postives = 9/11 (81.82%), Query Frame = 3 Query: 603 VQKLCSGGCDN 635 ++K SGGCDN Sbjct: 179 IKKFASGGCDN 189
BLAST of FC876289 vs. ExPASy Swiss-Prot
Match: SEC13_HUMAN (Protein SEC13 homolog OS=Homo sapiens GN=SEC13 PE=1 SV=3) HSP 1 Score: 198.364 bits (503), Expect = 1.827e-50 Identity = 90/162 (55.56%), Postives = 113/162 (69.75%), Query Frame = 1 Query: 97 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALV 582 ++T HED +HD MDYYG RLAT SSD S+KI V N +A L GH+G VW+VAWAHP +G+ILASCS+D VIIW+E N W K H H SSVNS+ WAPH+ GL LACGSSDG IS+ T +G W+ +I+ AH +G +VSWAP+ PG+L+ Sbjct: 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGT-WEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLI 168 HSP 2 Score: 21.1718 bits (43), Expect = 1.827e-50 Identity = 6/11 (54.55%), Postives = 9/11 (81.82%), Query Frame = 3 Query: 603 VQKLCSGGCDN 635 +++ SGGCDN Sbjct: 179 IKRFASGGCDN 189
BLAST of FC876289 vs. ExPASy Swiss-Prot
Match: SEC13_BOVIN (Protein SEC13 homolog OS=Bos taurus GN=SEC13 PE=2 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 3.104e-50 Identity = 91/162 (56.17%), Postives = 112/162 (69.14%), Query Frame = 1 Query: 97 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALV 582 ++T HED +HD MDYYG RLAT SSD S+KI V N +A L GH+G VW+VAWAHP +G+ILASCS+D VIIWKE N W K H H SSVNS+ WAPH+ GL LACGSSDG IS+ T G W+ +I+ AH +G +VSWAP+ PG+L+ Sbjct: 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILVADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGT-WEKTHEHTGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGLGQWEVKKINNAHTIGCNAVSWAPAVVPGSLI 168 HSP 2 Score: 22.3274 bits (46), Expect = 3.104e-50 Identity = 7/11 (63.64%), Postives = 9/11 (81.82%), Query Frame = 3 Query: 603 VQKLCSGGCDN 635 ++K SGGCDN Sbjct: 179 IKKFASGGCDN 189
BLAST of FC876289 vs. ExPASy Swiss-Prot
Match: SEC13_DICDI (Protein transport protein SEC13 OS=Dictyostelium discoideum GN=sec13 PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 4.559e-48 Identity = 90/169 (53.25%), Postives = 111/169 (65.68%), Query Frame = 1 Query: 82 MPPQKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGS 588 M Q +++GHED VHD DYYGK LAT SSD IKI VG QHL L GH+G VW+VAWAHPKFG ILAS S+D VI+WKE +N W H + H+ SVNSI WAPHE GL LAC SSDG++++ + W+ + Q +GV SVSW+P+ P +LV S Sbjct: 1 MATQNVDSGHEDMVHDAQFDYYGKFLATCSSDKMIKIFDVGGENPQHLVDLRGHEGPVWQVAWAHPKFGKILASASYDRKVIVWKEVGNNSWSIIHQYAGHELSVNSISWAPHEFGLSLACASSDGSVTIHNYN-NNVWEAPQKIQVSQIGVNSVSWSPAAIPTSLVNS 168
BLAST of FC876289 vs. ExPASy Swiss-Prot
Match: SEC13_USTMA (Protein transport protein SEC13 OS=Ustilago maydis GN=SEC13 PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 6.737e-47 Identity = 95/193 (49.22%), Postives = 119/193 (61.66%), Query Frame = 1 Query: 88 PQKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAK-LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKE-----------------------GNSNEW--IKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGS 588 P+ IET HED VHD +D+YGKRLAT SSD ++K+ + N T A+ L GH+G VW+VAWAHP FG ILASCS+DG V+IWK+ ++ W IK+H H +SVNSI WAPHELG LAC SSDGN+SV T DG W + AHPVG +VSWAP+ PG+L+ + Sbjct: 18 PKNIETQHEDMVHDAQLDFYGKRLATCSSDRTVKVFDIVNGTPSTTAETLHGHQGPVWQVAWAHPTFGDILASCSYDGKVVIWKDNGAGASIGASAPYGSQSAYGAPTSSAGGWTKIKEHTL--HTASVNSISWAPHELGSILACASSDGNVSVLTFNNDGTWAVDLV-AAHPVGCNAVSWAPAVVPGSLISA 207 HSP 2 Score: 21.1718 bits (43), Expect = 6.737e-47 Identity = 7/12 (58.33%), Postives = 9/12 (75.00%), Query Frame = 3 Query: 603 VQKLCSGGCDNT 638 V++ S GCDNT Sbjct: 225 VKRFASAGCDNT 236
BLAST of FC876289 vs. ExPASy Swiss-Prot
Match: SEC13_COCIM (Protein transport protein SEC13 OS=Coccidioides immitis GN=SEC13 PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.766e-45 Identity = 92/178 (51.69%), Postives = 121/178 (67.98%), Query Frame = 1 Query: 103 TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNS-----NEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALV-GSGFLDQFRSFV 618 +GH+D +HD MDYYG+RLAT SSD +IKI + ++ + + L GH+GAVW VAWAHPKFG+ILAS S+DG V+IW+E +S + W + F H +SVN + WAPHELG LAC SSDG++SV R D W T +I AH +GV SVSWAP+ APG+++ + Q R FV Sbjct: 8 SGHDDMIHDAGMDYYGRRLATCSSDKTIKIFELEGDSHRLIETLKGHEGAVWCVAWAHPKFGTILASSSYDGKVLIWREQSSAASTGSSWSRVFDFSLHTASVNMVSWAPHELGCVLACASSDGHVSVLEFR-DNSW-THQIFHAHGMGVNSVSWAPAAAPGSVISATPSTGQIRRFV 183
BLAST of FC876289 vs. ExPASy Swiss-Prot
Match: SEC13_ASPNC (Protein transport protein sec13 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=sec13 PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 6.161e-45 Identity = 88/170 (51.76%), Postives = 114/170 (67.06%), Query Frame = 1 Query: 103 TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSN--------EWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGS 588 +GH++ +HD +DYYG+RLAT SSD +IKI + T + + L GH+GAVW VAWAHPKFG+ILAS S+DG V+IW+E + N W K F H +SVN + WAPHE G LAC SSDG++SV R D W T +I AH +GV S+SWAP+ APG+L+ S Sbjct: 9 SGHDEMIHDAGLDYYGRRLATCSSDKTIKIFEIEGETHRLIETLKGHEGAVWCVAWAHPKFGTILASSSYDGKVLIWREQHQNATSPVAGGAWTKVFDFSLHTASVNMVSWAPHESGCLLACASSDGHVSVLEFR-DNSW-THQIFHAHGMGVNSISWAPAAAPGSLISS 176
BLAST of FC876289 vs. ExPASy Swiss-Prot
Match: SEC13_NEUCR (Protein transport protein sec-13 OS=Neurospora crassa GN=sec-13 PE=3 SV=2) HSP 1 Score: 179.104 bits (453), Expect = 1.793e-44 Identity = 84/162 (51.85%), Postives = 111/162 (68.52%), Query Frame = 1 Query: 103 TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGS 588 +GH+D +HD +DYYG+RLAT SSD +IKI + + + + L GH GAVW VAWAHPK+G+ILAS +DG V+IW+E + W + F HK+SVN + W+PHE G LAC SSDGN+SV + D W+ I AH +GV SVSWAP+T PG++V S Sbjct: 11 SGHDDMIHDAVLDYYGRRLATCSSDRTIKIFEIEGESQRLVETLKGHDGAVWSVAWAHPKYGNILASAGYDGKVLIWRE-QAGSWQRIFDFALHKASVNIVSWSPHEAGCLLACASSDGNVSVLEFK-DNSWE-HNIFHAHGLGVNSVSWAPATTPGSIVSS 169
BLAST of FC876289 vs. ExPASy Swiss-Prot
Match: SEC13_EMENI (Protein transport protein sec13 OS=Emericella nidulans GN=sec13 PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 3.058e-44 Identity = 92/181 (50.83%), Postives = 118/181 (65.19%), Query Frame = 1 Query: 103 TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGN--------SNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSG-FLDQFRSFV 618 +GH+D +HD +DYYG+RLAT SSD +IKI + +T + + L GH+G VW V WAHPKFG+ILAS S+DG V+IW+E + S W K F H +SVN I WAPHE G LAC SSDG++SV R D W T +I AH +GV S+SWAP+ +PG+LV S + Q R FV Sbjct: 10 SGHDDMIHDAGLDYYGRRLATCSSDKTIKIFEIEGDTHKLVETLKGHEGPVWCVEWAHPKFGTILASSSYDGKVLIWREQHQSSTAPIGSGAWTKVFDFSLHTASVNMISWAPHETGCLLACASSDGHVSVLEFR-DNSW-THQIFHAHGMGVNSISWAPAASPGSLVSSNPGIGQQRRFV 188 The following BLAST results are available for this feature:
BLAST of FC876289 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 52
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876289 ID=FC876289; Name=FC876289; organism=Citrus clementina; type=EST; length=665bpback to top |