FC876628
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876628 vs. ExPASy Swiss-Prot
Match: IM30_PEA (Membrane-associated 30 kDa protein, chloroplastic OS=Pisum sativum GN=IM30 PE=2 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 1.489e-53 Identity = 119/182 (65.38%), Postives = 136/182 (74.73%), Query Frame = 1 Query: 94 MAAKSQIVTGF-TMPMTPAPXXXXXXXXXXLCMVKKPLTTSFFNGG-VGALKVTRLRIAPSSRSYCYRQGGGALNTRMNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKRLENKYKAAEQASEDWYRKAQLALQKGEEDLAREALKRRXSYADNANALK 633 M K QI +G + P+ P+ ++KKPL T+ F V LK +RIA R GGGA+ RMNLFDR ARVVKSYANA++S+FEDPEKILEQAVLEMNDDL KMRQATAQVLASQKRLENKYKAA+QASE+WYRKAQLALQKGEEDLAREALKRR S+ADNA++LK Sbjct: 1 MTTKFQIFSGLPSAPLQPSSS-----------LLKKPLATTLFGTRPVDTLKFRVMRIAKPVR------GGGAIGVRMNLFDRFARVVKSYANALVSTFEDPEKILEQAVLEMNDDLTKMRQATAQVLASQKRLENKYKAAQQASEEWYRKAQLALQKGEEDLAREALKRRKSFADNASSLK 165
BLAST of FC876628 vs. ExPASy Swiss-Prot
Match: IM30_ARATH (Probable membrane-associated 30 kDa protein, chloroplastic OS=Arabidopsis thaliana GN=At1g65260 PE=1 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 3.105e-51 Identity = 111/181 (61.33%), Postives = 132/181 (72.93%), Query Frame = 1 Query: 94 MAAKSQIVTGFTMPMTPAPXXXXXXXXXXLCMVK-KPLTTSFFNGGVGALKVTRLRIAPSSRSYCYRQGGGALNTRMNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKRLENKYKAAEQASEDWYRKAQLALQKGEEDLAREALKRRXSYADNANALK 633 MA K+ VTG P+ P C ++ PL TSFF GAL+V LR+A +R C G GA MNLF+R +RVVKSYANA++SSFEDPEKILEQ V+EMN DL KMRQATAQVLASQK+L+NKYKAA+Q+S+DWY++AQLAL KG+EDLAREALKRR S+ADNA ALK Sbjct: 1 MALKASPVTGLFPPLRPTASSSPSTSSNRPCSLRILPLRTSFFGNSSGALRVNVLRLACDNRLRC--NGHGAT---MNLFERFSRVVKSYANALISSFEDPEKILEQTVIEMNSDLTKMRQATAQVLASQKQLQNKYKAAQQSSDDWYKRAQLALAKGDEDLAREALKRRKSFADNATALK 176
BLAST of FC876628 vs. ExPASy Swiss-Prot
Match: IM30_ORYSJ (Probable membrane-associated 30 kDa protein, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0895100 PE=1 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.104e-48 Identity = 104/144 (72.22%), Postives = 119/144 (82.64%), Query Frame = 1 Query: 202 LTTSFFNGGVGALKVTRLRIAPSSRSYCYRQGGGALNTRMNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKRLENKYKAAEQASEDWYRKAQLALQKGEEDLAREALKRRXSYADNANALK 633 L TSF NG V +L++ ++R + +R C R NL DR +RVVKSYANA+LSSFEDPEKIL+QAVLEMNDDL KMRQATAQVLASQKRLENKYKAAEQAS+DWYR+AQLALQKG+EDLAREALKRR SYADNA++LK Sbjct: 27 LRTSFLNGSV-SLRLIQVRQSNVNRFKCN-------GIRSNLLDRFSRVVKSYANAVLSSFEDPEKILDQAVLEMNDDLTKMRQATAQVLASQKRLENKYKAAEQASDDWYRRAQLALQKGDEDLAREALKRRKSYADNASSLK 162
BLAST of FC876628 vs. ExPASy Swiss-Prot
Match: Y617_SYNY3 (Uncharacterized protein sll0617 OS=Synechocystis sp. (strain PCC 6803) GN=sll0617 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.359e-22 Identity = 53/103 (51.46%), Postives = 73/103 (70.87%), Query Frame = 1 Query: 319 MNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKRLENKYKAAEQASEDWYRKAQLALQKGEEDLAREALKRRXSYADNANA 627 M LFDRL RVV++ N ++S EDPEK+LEQAV++M +DLV++RQA A+ +A +KR E + Q ++ W +A+LAL GEE+LAREAL R+ S D A A Sbjct: 1 MGLFDRLGRVVRANLNDLVSKAEDPEKVLEQAVIDMQEDLVQLRQAVARTIAEEKRTEQRLNQDTQEAKKWEDRAKLALTNGEENLAREALARKKSLTDTAAA 103
BLAST of FC876628 vs. ExPASy Swiss-Prot
Match: PSPA_SHIFL (Phage shock protein A OS=Shigella flexneri GN=pspA PE=3 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 3.035e-14 Identity = 40/105 (38.10%), Postives = 61/105 (58.10%), Query Frame = 1 Query: 319 MNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKRLENKYKAAEQASEDWYRKAQLALQKGEEDLAREALKRRXSYADNANALK 633 M +F R A +V + NA+L EDP+K++ + EM D LV++R +A+ LA +K+L + + A +W KA+LAL K EDLAR AL + D +L+ Sbjct: 1 MGIFSRFADIVNANINALLEKAEDPQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRRIEQASAREVEWQEKAELALLKEREDLARAALIEKQKLTDLIKSLE 105
BLAST of FC876628 vs. ExPASy Swiss-Prot
Match: PSPA_ECOLI (Phage shock protein A OS=Escherichia coli (strain K12) GN=pspA PE=1 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 3.035e-14 Identity = 40/105 (38.10%), Postives = 61/105 (58.10%), Query Frame = 1 Query: 319 MNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKRLENKYKAAEQASEDWYRKAQLALQKGEEDLAREALKRRXSYADNANALK 633 M +F R A +V + NA+L EDP+K++ + EM D LV++R +A+ LA +K+L + + A +W KA+LAL K EDLAR AL + D +L+ Sbjct: 1 MGIFSRFADIVNANINALLEKAEDPQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRRIEQASAREVEWQEKAELALLKEREDLARAALIEKQKLTDLIKSLE 105
BLAST of FC876628 vs. ExPASy Swiss-Prot
Match: PSPA_ECO57 (Phage shock protein A OS=Escherichia coli O157:H7 GN=pspA PE=3 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 3.035e-14 Identity = 40/105 (38.10%), Postives = 61/105 (58.10%), Query Frame = 1 Query: 319 MNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKRLENKYKAAEQASEDWYRKAQLALQKGEEDLAREALKRRXSYADNANALK 633 M +F R A +V + NA+L EDP+K++ + EM D LV++R +A+ LA +K+L + + A +W KA+LAL K EDLAR AL + D +L+ Sbjct: 1 MGIFSRFADIVNANINALLEKAEDPQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRRIEQASAREVEWQEKAELALLKEREDLARAALIEKQKLTDLIKSLE 105
BLAST of FC876628 vs. ExPASy Swiss-Prot
Match: PSPA_DEIRA (Phage shock protein A homolog OS=Deinococcus radiodurans GN=DR_1473 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 9.764e-13 Identity = 37/101 (36.63%), Postives = 63/101 (62.38%), Query Frame = 1 Query: 319 MNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKRLENKYKAAEQASEDWYRKAQLALQKGEEDLAREALKRRXSYADNA 621 M++FDRL+R++++ N ++S EDP KI++QA+ +M R A +A +LE + + + ++ +KA+ AL+ G EDLAREAL+R ++ D A Sbjct: 1 MSIFDRLSRLLRANVNDMISKAEDPAKIIDQALRDMRSAYADARNEVAGAMAQAAKLEREAGTNSKLAAEYEKKAEEALRGGSEDLAREALRRAQNHKDLA 101 The following BLAST results are available for this feature:
BLAST of FC876628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876628 ID=FC876628; Name=FC876628; organism=Citrus clementina; type=EST; length=633bpback to top |