FC876644
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876644 vs. ExPASy Swiss-Prot
Match: CAX2_ARATH (Vacuolar cation/proton exchanger 2 OS=Arabidopsis thaliana GN=CAX2 PE=1 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 4.479e-18 Identity = 45/67 (67.16%), Postives = 51/67 (76.12%), Query Frame = -3 Query: 427 IPFGGVIGGLMVRPRDLNFQFFETAIFFITVIVGAFFLQEGIFNYFKGLMLFFCFLLVGVSFFVQED 627 +PF VIG +M + DLNFQ FETA+ FITVIV AFFLQEG NYFKGLML C+L+V SFFV ED Sbjct: 369 VPFCVVIGWMMGQQMDLNFQLFETAMLFITVIVVAFFLQEGSSNYFKGLMLILCYLIVAASFFVHED 435
BLAST of FC876644 vs. ExPASy Swiss-Prot
Match: CAX5_ARATH (Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana GN=CAX5 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 9.979e-18 Identity = 45/67 (67.16%), Postives = 49/67 (73.13%), Query Frame = -3 Query: 427 IPFGGVIGGLMVRPRDLNFQFFETAIFFITVIVGAFFLQEGIFNYFKGLMLFFCFLLVGVSFFVQED 627 +PF VIG +M DLNFQ FETA FITVIV AFFLQEG NYFKGLML C+L+V SFFV ED Sbjct: 369 VPFCVVIGWMMGAQMDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLMLILCYLIVAASFFVHED 435
BLAST of FC876644 vs. ExPASy Swiss-Prot
Match: CAX2_ORYSJ (Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica GN=CAX2 PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 2.458e-16 Identity = 43/67 (64.18%), Postives = 48/67 (71.64%), Query Frame = -3 Query: 427 IPFGGVIGGLMVRPRDLNFQFFETAIFFITVIVGAFFLQEGIFNYFKGLMLFFCFLLVGVSFFVQED 627 IPF VIG +M + DLNFQ FETA FITV+V AF LQEG NYFKGLML C+L+V SFFV D Sbjct: 364 IPFCVVIGWIMGQQMDLNFQLFETATLFITVLVVAFMLQEGTSNYFKGLMLILCYLIVAASFFVHVD 430
BLAST of FC876644 vs. ExPASy Swiss-Prot
Match: CAX3_ORYSJ (Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica GN=CAX3 PE=2 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 9.340e-16 Identity = 41/67 (61.19%), Postives = 48/67 (71.64%), Query Frame = -3 Query: 427 IPFGGVIGGLMVRPRDLNFQFFETAIFFITVIVGAFFLQEGIFNYFKGLMLFFCFLLVGVSFFVQED 627 IPF VIG +M + DLNFQ FETA FITV+V AF LQ+G+ NY KGLML C+L+V SFFV D Sbjct: 345 IPFCVVIGWMMGQKMDLNFQLFETATLFITVLVVAFMLQDGVANYLKGLMLILCYLIVAASFFVHVD 411
BLAST of FC876644 vs. ExPASy Swiss-Prot
Match: CAX6_ARATH (Putative vacuolar cation/proton exchanger 6 OS=Arabidopsis thaliana GN=CAX6 PE=3 SV=3) HSP 1 Score: 77.7962 bits (190), Expect = 5.125e-14 Identity = 42/68 (61.76%), Postives = 46/68 (67.65%), Query Frame = -3 Query: 427 IPFGGVIGGLMVRPRDLNFQFFETAIFFITVIVGAFFLQ-EGIFNYFKGLMLFFCFLLVGVSFFVQED 627 +PF VIG +M DLN Q FETA ITVIV AFFLQ EG NYFK LML C+L+V SFFV ED Sbjct: 377 VPFCVVIGWMMGAQMDLNLQLFETATLLITVIVVAFFLQLEGTSNYFKRLMLILCYLIVAASFFVHED 444
BLAST of FC876644 vs. ExPASy Swiss-Prot
Match: CAX4_ORYSJ (Putative vacuolar cation/proton exchanger 4 OS=Oryza sativa subsp. japonica GN=Os02g0138900 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.125e-14 Identity = 38/68 (55.88%), Postives = 46/68 (67.65%), Query Frame = -3 Query: 427 GIPFGGVIGGLMVRPRDLNFQFFETAIFFITVIVGAFFLQEGIFNYFKGLMLFFCFLLVGVSFFVQED 630 GIPF V+G +M +P DLNF FETA TV+V AF LQ+G N KGLMLF C+L+V SF+V D Sbjct: 368 GIPFCVVMGWMMGKPMDLNFHLFETASLLTTVLVVAFLLQDGTSNCVKGLMLFLCYLIVAASFYVHAD 435 The following BLAST results are available for this feature:
BLAST of FC876644 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876644 ID=FC876644; Name=FC876644; organism=Citrus clementina; type=EST; length=632bpback to top |