FC876656
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876656 vs. ExPASy Swiss-Prot
Match: ZIP2_ARATH (Zinc transporter 2 OS=Arabidopsis thaliana GN=ZIP2 PE=2 SV=1) HSP 1 Score: 296.204 bits (757), Expect = 5.316e-97 Identity = 149/231 (64.50%), Postives = 174/231 (75.32%), Query Frame = 3 Query: 15 STFAGGVSPYFYRWNESFLLLGTQFAGGVFLGTSMMHFLSDSNETFKDLTSKSYPFAFMLASAGYLLTMFGDCIINFVIKQG-----------SKKETRVDVEEEKSEEV--GTDGNPVFFRTSSIGDTILLILALCFHSVFEGIAIGVSATKGEAWRNLWTISLHKIFAAIAMGIALLRMIPKRPFLLTAAYSFAFAISSPIGVGIGIAIDATTQGHIADWIYAISMGLA 668 STF GVSPYFYRWNESFLLLGTQF+GG+FL T+++HFLSD+NETF+ L K YP+AFMLA+AGY LTM D + FV S+++ V V+EE E+ G D + RTS GDT LLI ALCFHS+FEGIAIG+S TK +AWRNLWTISLHK+FAA+AMGIALL++IPKRPF LT YSFAF ISSPIGVGIGI I+AT+QG DW YAISMGLA Sbjct: 74 STFLAGVSPYFYRWNESFLLLGTQFSGGIFLATALIHFLSDANETFRGLKHKEYPYAFMLAAAGYCLTMLADVAVAFVAAGSNNNHVGASVGESREDDDVAVKEEGRREIKSGVDVSQALIRTSGFGDTALLIFALCFHSIFEGIAIGLSDTKSDAWRNLWTISLHKVFAAVAMGIALLKLIPKRPFFLTVVYSFAFGISSPIGVGIGIGINATSQGAGGDWTYAISMGLA 304 HSP 2 Score: 80.4925 bits (197), Expect = 5.316e-97 Identity = 32/51 (62.75%), Postives = 43/51 (84.31%), Query Frame = 1 Query: 664 LLCGVFIYVAINHLIAKGFKPQNKCYFDAPFFKFLAVLXEVGVIAVVMIWD 816 L CGVF+YVA+NHLI+KG+KP+ +CYFD P +KF+AV V +++VVMIWD Sbjct: 303 LACGVFVYVAVNHLISKGYKPREECYFDKPIYKFIAVFLGVALLSVVMIWD 353
BLAST of FC876656 vs. ExPASy Swiss-Prot
Match: ZIP11_ARATH (Zinc transporter 11 OS=Arabidopsis thaliana GN=ZIP11 PE=2 SV=1) HSP 1 Score: 266.544 bits (680), Expect = 3.788e-86 Identity = 137/227 (60.35%), Postives = 170/227 (74.89%), Query Frame = 3 Query: 12 VSTFAGGVSPYFYRWNESFLLLGTQFAGGVFLGTSMMHFLSDSNETFKDLT--------SKSYPFAFMLASAGYLLTMFGDCIINFVIKQGSKKETRVDVEEEKSEEVGTDGNPVFFRTSSIGDTILLILALCFHSVFEGIAIGVSATKGEAWRNLWTISLHKIFAAIAMGIALLRMIPKRPFLLTAAYSFAFAISSPIGVGIGIAIDATTQGHIADWIYAISMGLA 668 V TF GVSPYF +W++ FL+LGTQFAGGVFL T++MHFLSD++ETF+ L S +YPFA+MLA AG++LTM D +I + + ++ + + E++ ++ T +SIGD+ILLI+ALCFHSVFEGIAIG+S TK +AWR LWTI+LHKIFAAIAMGIALLRMIP RP + YSFAFAISSPIGV IGI IDATTQG IADWI+A+SM LA Sbjct: 58 VLTFISGVSPYFLKWSQGFLVLGTQFAGGVFLATALMHFLSDADETFRGLLTAEGESEPSPAYPFAYMLACAGFMLTMLADSVIAHIYSK-TQNDLELQGEDKSNQRSATT-------ETSIGDSILLIVALCFHSVFEGIAIGISETKSDAWRALWTITLHKIFAAIAMGIALLRMIPDRPLFSSITYSFAFAISSPIGVAIGIVIDATTQGSIADWIFALSMSLA 276 HSP 2 Score: 73.9442 bits (180), Expect = 3.788e-86 Identity = 32/51 (62.75%), Postives = 41/51 (80.39%), Query Frame = 1 Query: 664 LLCGVFIYVAINHLIAKGFKPQNKCYFDAPFFKFLAVLXEVGVIAVVMIWD 816 L CGVF+YV++NHL+AKG++P K + D P +KFLAVL V VIA+VMIWD Sbjct: 275 LACGVFVYVSVNHLLAKGYRPNKKVHVDEPRYKFLAVLFGVVVIAIVMIWD 325
BLAST of FC876656 vs. ExPASy Swiss-Prot
Match: S39A1_TAKRU (Zinc transporter ZIP1 OS=Takifugu rubripes GN=slc39a1 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.444e-11 Identity = 57/201 (28.36%), Postives = 93/201 (46.27%), Query Frame = 3 Query: 57 NESFLLLGTQFAGGVFLGTSMMH----FLSDSN-ETFKDLTSKSYPFAFMLASAGYLLTMFGDCII-NFVIKQGSKKETRVDVEEEKSEEVGTDGNP-----------VFFRTSSIGDTILLILALCFHSVFEGIAIGVSATKGEAWRNLWTISLHKIFAAIAMGIALLRMIPKRPFLLTAAYSFAFAISSPIGVGIGIAI 608 + + L L + FAGGVFL + +LSD N E S+P + +AG+ + + I+ N + + +E + E KS G+ V F+ S + +L L+L HS+FEG+AIG+ T + I +HK ++ + L++ P L AAY FA+ SP+G+ IGI++ Sbjct: 41 HRTVLSLISCFAGGVFLSACFLDIIPDYLSDINTELHARQLETSFPLPEFIMAAGFFTVLILERIVLNCKEMRATHEERTTLIPERKSGHGHGHGDGPDPESSGHHVHVDFQAHSPFRSFMLFLSLSLHSIFEGLAIGLQTTDPKVVEICIAILVHKSIIVFSLAVKLVQ--SAIPPLWVAAYIGVFALMSPVGIAIGISV 239 The following BLAST results are available for this feature:
BLAST of FC876656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876656 ID=FC876656; Name=FC876656; organism=Citrus clementina; type=EST; length=821bpback to top |